RNA–Protein interactions for RNA: ENST00000557978.6

PBX4-202, Transcript of PBX homeobox 4, humanhuman

TSL 1 (best)

Gene PBX4, Length 1,416 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PBX4-202ENST00000557978 DICER1Q9UPY3 1922 aaKnown RBP21.14■□□□□ 0.97
PBX4-202ENST00000557978 ARHGAP27Q6ZUM4 889 aa21.13■□□□□ 0.97
PBX4-202ENST00000557978 PLA2G12BQ9BX93 195 aa21.13■□□□□ 0.97
PBX4-202ENST00000557978 ABCC4O15439 1325 aa21.13■□□□□ 0.97
PBX4-202ENST00000557978 SPEF2Q9C093 1822 aa21.13■□□□□ 0.97
PBX4-202ENST00000557978 C21orf2O43822 256 aa21.12■□□□□ 0.97
PBX4-202ENST00000557978 CASP7P55210 303 aa21.12■□□□□ 0.97
PBX4-202ENST00000557978 RCAN3Q9UKA8 241 aa21.12■□□□□ 0.97
PBX4-202ENST00000557978 BBOX1O75936 387 aa21.12■□□□□ 0.97
PBX4-202ENST00000557978 TRIM27P14373 513 aa21.12■□□□□ 0.97
PBX4-202ENST00000557978 CTSWP56202 376 aa21.12■□□□□ 0.97
PBX4-202ENST00000557978 GRAPQ13588 217 aa21.12■□□□□ 0.97
PBX4-202ENST00000557978 GRAPLQ8TC17 118 aaPredicted RBP21.12■□□□□ 0.97
PBX4-202ENST00000557978 TMX4Q9H1E5 349 aaPredicted RBP21.12■□□□□ 0.97
PBX4-202ENST00000557978 ZNF219Q9P2Y4 722 aaPredicted RBP21.12■□□□□ 0.97
PBX4-202ENST00000557978 CC2D2BQ6DHV5 1058 aa21.11■□□□□ 0.97
PBX4-202ENST00000557978 TMC4Q7Z404 712 aa21.11■□□□□ 0.97
PBX4-202ENST00000557978 C7orf43Q8WVR3 580 aa21.11■□□□□ 0.97
PBX4-202ENST00000557978 UTYO14607 1347 aa21.1■□□□□ 0.97
PBX4-202ENST00000557978 TTLL11Q8NHH1 800 aa21.1■□□□□ 0.97
PBX4-202ENST00000557978 PPEF1O14829 653 aaPredicted RBP21.09■□□□□ 0.97
PBX4-202ENST00000557978 GRIPAP1Q4V328 841 aa21.09■□□□□ 0.97
PBX4-202ENST00000557978 CCDC93Q567U6 631 aa21.09■□□□□ 0.97
PBX4-202ENST00000557978 INTS3Q68E01 1043 aaKnown RBP21.09■□□□□ 0.97
PBX4-202ENST00000557978 NBPF7P0C2Y1 421 aaPredicted RBP21.08■□□□□ 0.97
PBX4-202ENST00000557978 USP44Q9H0E7 712 aa21.08■□□□□ 0.97
PBX4-202ENST00000557978 HDAC5Q9UQL6 1122 aa21.08■□□□□ 0.97
PBX4-202ENST00000557978 LRRC37AA6NMS7 1700 aa21.08■□□□□ 0.96
PBX4-202ENST00000557978 RTL9Q8NET4 1388 aa21.07■□□□□ 0.96
PBX4-202ENST00000557978 CSF1RP07333 972 aa21.07■□□□□ 0.96
PBX4-202ENST00000557978 MS4A1P11836 297 aa21.07■□□□□ 0.96
PBX4-202ENST00000557978 FTSJ3Q8IY81 847 aaKnown RBP21.07■□□□□ 0.96
PBX4-202ENST00000557978 RTKN2Q8IZC4 609 aa21.07■□□□□ 0.96
PBX4-202ENST00000557978 CLUAP1Q96AJ1 413 aa21.07■□□□□ 0.96
PBX4-202ENST00000557978 CCDC85AQ96PX6 553 aaPredicted RBP21.07■□□□□ 0.96
PBX4-202ENST00000557978 RPS8P62241 208 aaKnown RBP21.06■□□□□ 0.96
PBX4-202ENST00000557978 SP8Q8IXZ3 490 aa21.06■□□□□ 0.96
PBX4-202ENST00000557978 DZIP1LQ8IYY4 767 aaKnown RBP21.06■□□□□ 0.96
PBX4-202ENST00000557978 CDC5LQ99459 802 aaKnown RBP21.06■□□□□ 0.96
PBX4-202ENST00000557978 ATP6V0A2Q9Y487 856 aa21.06■□□□□ 0.96
PBX4-202ENST00000557978 CELF1Q92879 486 aaKnown RBP21.05■□□□□ 0.96
PBX4-202ENST00000557978 SEC31BQ9NQW1 1179 aa21.05■□□□□ 0.96
PBX4-202ENST00000557978 FOXO4P98177 505 aa21.04■□□□□ 0.96
PBX4-202ENST00000557978 ANKRD18AQ8IVF6 992 aa21.04■□□□□ 0.96
PBX4-202ENST00000557978 GOLGA6L2Q8N9W4 650 aaPredicted RBP21.04■□□□□ 0.96
PBX4-202ENST00000557978 TAOK3Q9H2K8 898 aa21.04■□□□□ 0.96
PBX4-202ENST00000557978 GREM2Q9H772 168 aa21.04■□□□□ 0.96
PBX4-202ENST00000557978 LTBP3Q9NS15 1303 aa21.04■□□□□ 0.96
PBX4-202ENST00000557978 UBTFL1P0CB47 393 aaPredicted RBP21.04■□□□□ 0.96
PBX4-202ENST00000557978 LMBR1LQ6UX01 489 aa21.04■□□□□ 0.96
PBX4-202ENST00000557978 SUCLG2Q96I99 432 aa21.04■□□□□ 0.96
PBX4-202ENST00000557978 TNNQ9UQP3 1299 aa21.04■□□□□ 0.96
PBX4-202ENST00000557978 CHMP3Q9Y3E7 222 aa21.04■□□□□ 0.96
PBX4-202ENST00000557978 NFKBIEO00221 500 aa21.03■□□□□ 0.96
PBX4-202ENST00000557978 GNAI3P08754 354 aa21.03■□□□□ 0.96
PBX4-202ENST00000557978 ITGA6P23229 1130 aa21.03■□□□□ 0.96
PBX4-202ENST00000557978 COL4A1P02462 1669 aa21.02■□□□□ 0.96
PBX4-202ENST00000557978 ANKRD18BA2A2Z9 1011 aa21.02■□□□□ 0.96
PBX4-202ENST00000557978 LMNB1P20700 586 aa21.02■□□□□ 0.96
PBX4-202ENST00000557978 IGHMBP2P38935 993 aaKnown RBP21.02■□□□□ 0.96
PBX4-202ENST00000557978 FKBP4Q02790 459 aaKnown RBP eCLIP21.02■□□□□ 0.96
PBX4-202ENST00000557978 IFIT5Q13325 482 aaKnown RBP21.02■□□□□ 0.96
PBX4-202ENST00000557978 EPHA10Q5JZY3 1008 aa21.02■□□□□ 0.96
PBX4-202ENST00000557978 OLFM4Q6UX06 510 aa21.02■□□□□ 0.96
PBX4-202ENST00000557978 TMEM57Q8N5G2 664 aa21.02■□□□□ 0.96
PBX4-202ENST00000557978 RASSF7Q02833 373 aa21.01■□□□□ 0.95
PBX4-202ENST00000557978 CCDC57Q2TAC2 916 aa21.01■□□□□ 0.95
PBX4-202ENST00000557978 FAM161AQ3B820 660 aa21.01■□□□□ 0.95
PBX4-202ENST00000557978 KAZALD1Q96I82 304 aa21.01■□□□□ 0.95
PBX4-202ENST00000557978 PSMD1Q99460 953 aa21.01■□□□□ 0.95
PBX4-202ENST00000557978 TIAM2Q8IVF5 1701 aa21■□□□□ 0.95
PBX4-202ENST00000557978 RABL6Q3YEC7 729 aaPredicted RBP21■□□□□ 0.95
PBX4-202ENST00000557978 MPNDQ8N594 471 aa21■□□□□ 0.95
PBX4-202ENST00000557978 BICC1Q9H694 974 aaKnown RBP21■□□□□ 0.95
PBX4-202ENST00000557978 SNED1Q8TER0 1413 aa21■□□□□ 0.95
PBX4-202ENST00000557978 MPHOSPH8Q99549 860 aa20.99■□□□□ 0.95
PBX4-202ENST00000557978 BSDC1Q9NW68 430 aaPredicted RBP20.99■□□□□ 0.95
PBX4-202ENST00000557978 YY1P25490 414 aa20.98■□□□□ 0.95
PBX4-202ENST00000557978 C9orf131Q5VYM1 1079 aa20.98■□□□□ 0.95
PBX4-202ENST00000557978 DPP8Q6V1X1 898 aaPredicted RBP20.98■□□□□ 0.95
PBX4-202ENST00000557978 ITPRIPQ8IWB1 547 aa20.98■□□□□ 0.95
PBX4-202ENST00000557978 SUPT20HQ8NEM7 779 aa20.98■□□□□ 0.95
PBX4-202ENST00000557978 MEIS3Q99687 375 aa20.98■□□□□ 0.95
PBX4-202ENST00000557978 RNF181Q9P0P0 153 aa20.98■□□□□ 0.95
PBX4-202ENST00000557978 A0A1B0GUL6 1792 aa20.98■□□□□ 0.95
PBX4-202ENST00000557978 LTBP1Q14766 1721 aa20.98■□□□□ 0.95
PBX4-202ENST00000557978 TAF7LQ5H9L4 462 aa20.97■□□□□ 0.95
PBX4-202ENST00000557978 RLBP1P12271 317 aa20.96■□□□□ 0.95
PBX4-202ENST00000557978 ANKRD44Q8N8A2 993 aa20.96■□□□□ 0.95
PBX4-202ENST00000557978 VPS33BQ9H267 617 aa20.96■□□□□ 0.95
PBX4-202ENST00000557978 NSFL1CQ9UNZ2 370 aaKnown RBP20.96■□□□□ 0.95
PBX4-202ENST00000557978 ZC3H4Q9UPT8 1303 aaKnown RBP20.96■□□□□ 0.95
PBX4-202ENST00000557978 PLIN1O60240 522 aa20.95■□□□□ 0.95
PBX4-202ENST00000557978 PANK1Q8TE04 598 aa20.95■□□□□ 0.95
PBX4-202ENST00000557978 RTFDC1Q9BY42 306 aaPredicted RBP20.95■□□□□ 0.95
PBX4-202ENST00000557978 GNAI2P04899 355 aa20.95■□□□□ 0.94
PBX4-202ENST00000557978 PDE3AQ14432 1141 aa20.95■□□□□ 0.94
PBX4-202ENST00000557978 PODXL2Q9NZ53 605 aa20.95■□□□□ 0.94
PBX4-202ENST00000557978 ANKIB1Q9P2G1 1089 aa20.95■□□□□ 0.94
PBX4-202ENST00000557978 LRRFIP2Q9Y608 721 aaKnown RBP20.95■□□□□ 0.94
Retrieved 100 of 20,778 RNA–protein pairs in 61.1 ms