RNA–Protein interactions for RNA: ENST00000557718.5

FOXN3-218, Transcript of forkhead box N3, humanhuman

TSL 5

Gene FOXN3, Length 398 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FOXN3-218ENST00000557718 SSH2Q76I76 1423 aa8.2□□□□□ -1.1
FOXN3-218ENST00000557718 CDC14CA4D256 554 aa8.19□□□□□ -1.1
FOXN3-218ENST00000557718 GIGYF1O75420 1035 aaPredicted RBP8.19□□□□□ -1.1
FOXN3-218ENST00000557718 FBXO45P0C2W1 286 aa8.19□□□□□ -1.1
FOXN3-218ENST00000557718 DIEXFQ68CQ4 756 aaKnown RBP8.19□□□□□ -1.1
FOXN3-218ENST00000557718 PCDHB9Q9Y5E1 797 aa8.19□□□□□ -1.1
FOXN3-218ENST00000557718 LTN1O94822 1766 aa8.19□□□□□ -1.1
FOXN3-218ENST00000557718 POLR3AO14802 1390 aaPredicted RBP8.19□□□□□ -1.1
FOXN3-218ENST00000557718 NSD3Q9BZ95 1437 aa8.19□□□□□ -1.1
FOXN3-218ENST00000557718 PHRF1Q9P1Y6 1649 aaKnown RBP8.18□□□□□ -1.1
FOXN3-218ENST00000557718 RGPD5Q99666 1765 aa8.18□□□□□ -1.1
FOXN3-218ENST00000557718 SV2AQ7L0J3 742 aa8.18□□□□□ -1.1
FOXN3-218ENST00000557718 C19orf44Q9H6X5 657 aa8.18□□□□□ -1.1
FOXN3-218ENST00000557718 CABP1Q9NZU7 370 aa8.18□□□□□ -1.1
FOXN3-218ENST00000557718 USP6P35125 1406 aa8.18□□□□□ -1.1
FOXN3-218ENST00000557718 LYSMD3Q7Z3D4 306 aa8.17□□□□□ -1.1
FOXN3-218ENST00000557718 TMC1Q8TDI8 760 aa8.17□□□□□ -1.1
FOXN3-218ENST00000557718 MSH6P52701 1360 aa8.17□□□□□ -1.1
FOXN3-218ENST00000557718 PXDNQ92626 1479 aa8.17□□□□□ -1.1
FOXN3-218ENST00000557718 SHPRHQ149N8 1683 aa8.17□□□□□ -1.1
FOXN3-218ENST00000557718 ACEP12821 1306 aa8.16□□□□□ -1.1
FOXN3-218ENST00000557718 KCNMA1Q12791 1236 aa8.16□□□□□ -1.1
FOXN3-218ENST00000557718 IQSEC2Q5JU85 1478 aa8.16□□□□□ -1.1
FOXN3-218ENST00000557718 EDC4Q6P2E9 1401 aaKnown RBP8.16□□□□□ -1.1
FOXN3-218ENST00000557718 C14orf37Q86TY3 774 aa8.16□□□□□ -1.1
FOXN3-218ENST00000557718 ORAI2Q96SN7 254 aa8.16□□□□□ -1.1
FOXN3-218ENST00000557718 PEAK1Q9H792 1746 aa8.16□□□□□ -1.1
FOXN3-218ENST00000557718 PHLPP1O60346 1717 aa8.15□□□□□ -1.1
FOXN3-218ENST00000557718 COL16A1Q07092 1604 aaPredicted RBP8.15□□□□□ -1.1
FOXN3-218ENST00000557718 AHDC1Q5TGY3 1603 aaPredicted RBP8.15□□□□□ -1.1
FOXN3-218ENST00000557718 KTN1Q86UP2 1357 aaKnown RBP8.15□□□□□ -1.1
FOXN3-218ENST00000557718 PARD3Q8TEW0 1356 aa8.15□□□□□ -1.1
FOXN3-218ENST00000557718 NPC1L1Q9UHC9 1359 aa8.15□□□□□ -1.1
FOXN3-218ENST00000557718 ATP5J2-PTCD1G3V325 749 aa8.15□□□□□ -1.1
FOXN3-218ENST00000557718 SLURP2P0DP57 97 aa8.15□□□□□ -1.1
FOXN3-218ENST00000557718 GSK3AP49840 483 aa8.15□□□□□ -1.1
FOXN3-218ENST00000557718 RNF144AP50876 292 aaPredicted RBP8.15□□□□□ -1.1
FOXN3-218ENST00000557718 ZNF385CQ66K41 422 aaPredicted RBP8.15□□□□□ -1.1
FOXN3-218ENST00000557718 PRICKLE2Q7Z3G6 844 aa8.15□□□□□ -1.1
FOXN3-218ENST00000557718 PMFBP1Q8TBY8 1022 aa8.15□□□□□ -1.1
FOXN3-218ENST00000557718 ADAMTS8Q9UP79 889 aa8.15□□□□□ -1.1
FOXN3-218ENST00000557718 RGPD2P0DJD1 1756 aa8.15□□□□□ -1.11
FOXN3-218ENST00000557718 OVOS2A0A0J9YW53 1432 aa8.14□□□□□ -1.11
FOXN3-218ENST00000557718 OVOS2Q6IE36 1432 aa8.14□□□□□ -1.11
FOXN3-218ENST00000557718 BRPF1P55201 1214 aaPredicted RBP8.14□□□□□ -1.11
FOXN3-218ENST00000557718 CCDC125Q86Z20 511 aa8.14□□□□□ -1.11
FOXN3-218ENST00000557718 MED1Q15648 1581 aaPredicted RBP8.14□□□□□ -1.11
FOXN3-218ENST00000557718 COL18A1P39060 1754 aa8.13□□□□□ -1.11
FOXN3-218ENST00000557718 RHOQP17081 205 aa8.13□□□□□ -1.11
FOXN3-218ENST00000557718 ERVK-9P63128 1117 aa8.13□□□□□ -1.11
FOXN3-218ENST00000557718 NR1H3Q13133 447 aa8.13□□□□□ -1.11
FOXN3-218ENST00000557718 RNF20Q5VTR2 975 aa8.13□□□□□ -1.11
FOXN3-218ENST00000557718 SVOPQ8N4V2 548 aa8.13□□□□□ -1.11
FOXN3-218ENST00000557718 BANK1Q8NDB2 785 aa8.13□□□□□ -1.11
FOXN3-218ENST00000557718 WHAMMQ8TF30 809 aa8.13□□□□□ -1.11
FOXN3-218ENST00000557718 PRKRIP1Q9H875 184 aaPredicted RBP8.13□□□□□ -1.11
FOXN3-218ENST00000557718 CUEDC1Q9NWM3 386 aaPredicted RBP8.13□□□□□ -1.11
FOXN3-218ENST00000557718 COL22A1Q8NFW1 1626 aaPredicted RBP8.13□□□□□ -1.11
FOXN3-218ENST00000557718 SLIT3O75094 1523 aa8.13□□□□□ -1.11
FOXN3-218ENST00000557718 NFAT5O94916 1531 aa8.13□□□□□ -1.11
FOXN3-218ENST00000557718 TTC21BQ7Z4L5 1316 aa8.12□□□□□ -1.11
FOXN3-218ENST00000557718 A0A1W2PRU2 124 aa8.12□□□□□ -1.11
FOXN3-218ENST00000557718 MEN1O00255 615 aa8.12□□□□□ -1.11
FOXN3-218ENST00000557718 ATF3P18847 181 aa8.12□□□□□ -1.11
FOXN3-218ENST00000557718 MCCD1P59942 119 aaPredicted RBP8.12□□□□□ -1.11
FOXN3-218ENST00000557718 CC2D2BQ6DHV5 1058 aa8.12□□□□□ -1.11
FOXN3-218ENST00000557718 BRINP3Q76B58 766 aa8.12□□□□□ -1.11
FOXN3-218ENST00000557718 DDX17Q92841 729 aaKnown RBP8.12□□□□□ -1.11
FOXN3-218ENST00000557718 TERF2IPQ9NYB0 399 aa8.12□□□□□ -1.11
FOXN3-218ENST00000557718 FYB1O15117 783 aa8.11□□□□□ -1.11
FOXN3-218ENST00000557718 GPR37L1O60883 481 aa8.11□□□□□ -1.11
FOXN3-218ENST00000557718 GPC1P35052 558 aa8.11□□□□□ -1.11
FOXN3-218ENST00000557718 CCDC184Q52MB2 194 aa8.11□□□□□ -1.11
FOXN3-218ENST00000557718 ESCO1Q5FWF5 840 aa8.11□□□□□ -1.11
FOXN3-218ENST00000557718 CC2D1BQ5T0F9 858 aaKnown RBP8.11□□□□□ -1.11
FOXN3-218ENST00000557718 HDGFL2Q7Z4V5 671 aaPredicted RBP8.11□□□□□ -1.11
FOXN3-218ENST00000557718 NME9Q86XW9 330 aa8.11□□□□□ -1.11
FOXN3-218ENST00000557718 SLAIN2Q9P270 581 aa8.11□□□□□ -1.11
FOXN3-218ENST00000557718 NSD2O96028 1365 aa8.1□□□□□ -1.11
FOXN3-218ENST00000557718 USP31Q70CQ4 1352 aa8.1□□□□□ -1.11
FOXN3-218ENST00000557718 RGPD1P0DJD0 1748 aa8.1□□□□□ -1.11
FOXN3-218ENST00000557718 SOCS7O14512 581 aa8.1□□□□□ -1.11
FOXN3-218ENST00000557718 ARHGEF15O94989 841 aa8.1□□□□□ -1.11
FOXN3-218ENST00000557718 SCTRP47872 440 aa8.1□□□□□ -1.11
FOXN3-218ENST00000557718 XPCQ01831 940 aaPredicted RBP8.1□□□□□ -1.11
FOXN3-218ENST00000557718 CNGB1Q14028 1251 aaPredicted RBP8.1□□□□□ -1.11
FOXN3-218ENST00000557718 MTMR14Q8NCE2 650 aa8.1□□□□□ -1.11
FOXN3-218ENST00000557718 NGDNQ8NEJ9 315 aaKnown RBP8.1□□□□□ -1.11
FOXN3-218ENST00000557718 GGNBP2Q9H3C7 697 aa8.1□□□□□ -1.11
FOXN3-218ENST00000557718 KNSTRNQ9Y448 316 aa8.1□□□□□ -1.11
FOXN3-218ENST00000557718 COL3A1P02461 1466 aaPredicted RBP8.1□□□□□ -1.11
FOXN3-218ENST00000557718 VIRMAQ69YN4 1812 aaKnown RBP8.1□□□□□ -1.11
FOXN3-218ENST00000557718 CGNL1Q0VF96 1302 aa8.09□□□□□ -1.11
FOXN3-218ENST00000557718 FOXO3O43524 673 aa8.09□□□□□ -1.11
FOXN3-218ENST00000557718 ADAMTS2O95450 1211 aa8.09□□□□□ -1.11
FOXN3-218ENST00000557718 RASSF7Q02833 373 aa8.09□□□□□ -1.11
FOXN3-218ENST00000557718 GAS6Q14393 721 aa8.09□□□□□ -1.11
FOXN3-218ENST00000557718 SUGP2Q8IX01 1082 aaKnown RBP eCLIP8.09□□□□□ -1.111e-7■■■□□ 14.8
FOXN3-218ENST00000557718 ZNF592Q92610 1267 aa8.09□□□□□ -1.11
FOXN3-218ENST00000557718 NDUFB9Q9Y6M9 179 aa8.09□□□□□ -1.11
Retrieved 100 of 20,778 RNA–protein pairs in 49.7 ms