RNA–Protein interactions for RNA: ENST00000557599.5

PRKCH-227, Transcript of protein kinase C eta, humanhuman

TSL 3

Gene PRKCH, Length 746 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKCH-227ENST00000557599 KSR2Q6VAB6 950 aa13.25□□□□□ -0.29
PRKCH-227ENST00000557599 NBPF5PQ86XG9 351 aaPredicted RBP13.25□□□□□ -0.29
PRKCH-227ENST00000557599 XAGE3Q8WTP9 111 aa13.25□□□□□ -0.29
PRKCH-227ENST00000557599 L3MBTL3Q96JM7 780 aaPredicted RBP13.25□□□□□ -0.29
PRKCH-227ENST00000557599 NIP7Q9Y221 180 aaKnown RBP eCLIP13.25□□□□□ -0.29
PRKCH-227ENST00000557599 MAP3K15Q6ZN16 1313 aa13.24□□□□□ -0.29
PRKCH-227ENST00000557599 TPTE2Q6XPS3 522 aa13.24□□□□□ -0.29
PRKCH-227ENST00000557599 COPS6Q7L5N1 327 aa13.24□□□□□ -0.29
PRKCH-227ENST00000557599 SRCIN1Q9C0H9 1055 aa13.24□□□□□ -0.29
PRKCH-227ENST00000557599 LRRC37AA6NMS7 1700 aa13.24□□□□□ -0.29
PRKCH-227ENST00000557599 PI4KAP2A4QPH2 592 aa13.23□□□□□ -0.29
PRKCH-227ENST00000557599 F6X3S4 739 aa13.23□□□□□ -0.29
PRKCH-227ENST00000557599 HOXA10P31260 410 aaPredicted RBP13.23□□□□□ -0.29
PRKCH-227ENST00000557599 PDIA6Q15084 440 aa13.23□□□□□ -0.29
PRKCH-227ENST00000557599 PROSER3Q2NL68 480 aa13.23□□□□□ -0.29
PRKCH-227ENST00000557599 CCDC93Q567U6 631 aa13.23□□□□□ -0.29
PRKCH-227ENST00000557599 TTLL7Q6ZT98 887 aa13.23□□□□□ -0.29
PRKCH-227ENST00000557599 ANKRD13DQ6ZTN6 518 aa13.23□□□□□ -0.29
PRKCH-227ENST00000557599 PI4KAP1Q8N8J0 262 aa13.23□□□□□ -0.29
PRKCH-227ENST00000557599 PLBD2Q8NHP8 589 aa13.23□□□□□ -0.29
PRKCH-227ENST00000557599 TNNQ9UQP3 1299 aa13.23□□□□□ -0.29
PRKCH-227ENST00000557599 DDX60Q8IY21 1712 aaKnown RBP13.22□□□□□ -0.29
PRKCH-227ENST00000557599 GNAI3P08754 354 aa13.22□□□□□ -0.29
PRKCH-227ENST00000557599 FKBP4Q02790 459 aaKnown RBP eCLIP13.22□□□□□ -0.29
PRKCH-227ENST00000557599 DPY19L2Q6NUT2 758 aa13.22□□□□□ -0.29
PRKCH-227ENST00000557599 ZNF34Q8IZ26 560 aa13.22□□□□□ -0.29
PRKCH-227ENST00000557599 MAP3K2Q9Y2U5 619 aa13.22□□□□□ -0.29
PRKCH-227ENST00000557599 THSD7BQ9C0I4 1608 aa13.21□□□□□ -0.29
PRKCH-227ENST00000557599 PASKQ96RG2 1323 aa13.21□□□□□ -0.29
PRKCH-227ENST00000557599 ALDH1L1O75891 902 aa13.21□□□□□ -0.29
PRKCH-227ENST00000557599 NTSR2O95665 410 aa13.21□□□□□ -0.29
PRKCH-227ENST00000557599 HSP90AB3PQ58FF7 597 aa13.21□□□□□ -0.29
PRKCH-227ENST00000557599 PSMD1Q99460 953 aa13.21□□□□□ -0.29
PRKCH-227ENST00000557599 DDNO94850 711 aaPredicted RBP13.2□□□□□ -0.3
PRKCH-227ENST00000557599 POTEIP0CG38 1075 aa13.2□□□□□ -0.3
PRKCH-227ENST00000557599 POTEJP0CG39 1038 aa13.2□□□□□ -0.3
PRKCH-227ENST00000557599 OLFM4Q6UX06 510 aa13.2□□□□□ -0.3
PRKCH-227ENST00000557599 GIGYF2Q6Y7W6 1299 aaKnown RBP13.2□□□□□ -0.3
PRKCH-227ENST00000557599 LINS1Q8NG48 757 aa13.2□□□□□ -0.3
PRKCH-227ENST00000557599 NYXQ9GZU5 481 aa13.2□□□□□ -0.3
PRKCH-227ENST00000557599 ZNF219Q9P2Y4 722 aaPredicted RBP13.2□□□□□ -0.3
PRKCH-227ENST00000557599 DUOX1Q9NRD9 1551 aa13.2□□□□□ -0.3
PRKCH-227ENST00000557599 ZNF541Q9H0D2 1346 aa13.19□□□□□ -0.3
PRKCH-227ENST00000557599 FZD9O00144 591 aa13.19□□□□□ -0.3
PRKCH-227ENST00000557599 UBTFL1P0CB47 393 aaPredicted RBP13.19□□□□□ -0.3
PRKCH-227ENST00000557599 ALDH1B1P30837 517 aa13.19□□□□□ -0.3
PRKCH-227ENST00000557599 RTKN2Q8IZC4 609 aa13.19□□□□□ -0.3
PRKCH-227ENST00000557599 METTL22Q9BUU2 404 aaPredicted RBP13.19□□□□□ -0.3
PRKCH-227ENST00000557599 RWDD1Q9H446 243 aaPredicted RBP13.19□□□□□ -0.3
PRKCH-227ENST00000557599 C9orf78Q9NZ63 289 aaPredicted RBP13.19□□□□□ -0.3
PRKCH-227ENST00000557599 SUSD4Q5VX71 490 aa13.18□□□□□ -0.3
PRKCH-227ENST00000557599 CHADLQ6NUI6 762 aa13.18□□□□□ -0.3
PRKCH-227ENST00000557599 NUTM1Q86Y26 1132 aa13.18□□□□□ -0.3
PRKCH-227ENST00000557599 MYD88Q99836 296 aa13.18□□□□□ -0.3
PRKCH-227ENST00000557599 TAF1DQ9H5J8 278 aaPredicted RBP13.18□□□□□ -0.3
PRKCH-227ENST00000557599 ZBTB7BO15156 539 aaPredicted RBP13.17□□□□□ -0.3
PRKCH-227ENST00000557599 NPHP1O15259 732 aa13.17□□□□□ -0.3
PRKCH-227ENST00000557599 HMMRO75330 724 aa13.17□□□□□ -0.3
PRKCH-227ENST00000557599 GNAI2P04899 355 aa13.17□□□□□ -0.3
PRKCH-227ENST00000557599 IARSP41252 1262 aaKnown RBP13.17□□□□□ -0.3
PRKCH-227ENST00000557599 SLC10A5Q5PT55 438 aa13.17□□□□□ -0.3
PRKCH-227ENST00000557599 BEND3Q5T5X7 828 aa13.17□□□□□ -0.3
PRKCH-227ENST00000557599 B4GALNT3Q6L9W6 998 aa13.17□□□□□ -0.3
PRKCH-227ENST00000557599 C3orf67Q6ZVT6 689 aa13.17□□□□□ -0.3
PRKCH-227ENST00000557599 SLC51AQ86UW1 340 aa13.17□□□□□ -0.3
PRKCH-227ENST00000557599 ZBTB3Q9H5J0 574 aa13.17□□□□□ -0.3
PRKCH-227ENST00000557599 ZNF277Q9NRM2 450 aaPredicted RBP13.17□□□□□ -0.3
PRKCH-227ENST00000557599 ZBTB40Q9NUA8 1239 aa13.17□□□□□ -0.3
PRKCH-227ENST00000557599 COL4A1P02462 1669 aa13.16□□□□□ -0.3
PRKCH-227ENST00000557599 IQCA1LA6NCM1 817 aa13.16□□□□□ -0.3
PRKCH-227ENST00000557599 ITGBL1O95965 494 aaPredicted RBP13.16□□□□□ -0.3
PRKCH-227ENST00000557599 CC2D2BQ6DHV5 1058 aa13.16□□□□□ -0.3
PRKCH-227ENST00000557599 CENPQQ7L2Z9 268 aaPredicted RBP13.16□□□□□ -0.3
PRKCH-227ENST00000557599 LDHDQ86WU2 507 aa13.16□□□□□ -0.3
PRKCH-227ENST00000557599 CRAMP1Q96RY5 1269 aa13.16□□□□□ -0.3
PRKCH-227ENST00000557599 CREBZFQ9NS37 354 aa13.16□□□□□ -0.3
PRKCH-227ENST00000557599 GRIPAP1Q4V328 841 aa13.15□□□□□ -0.3
PRKCH-227ENST00000557599 PARP10Q53GL7 1025 aa13.15□□□□□ -0.3
PRKCH-227ENST00000557599 ZBTB47Q9UFB7 747 aaPredicted RBP13.15□□□□□ -0.3
PRKCH-227ENST00000557599 FAM177BA6PVY3 158 aa13.14□□□□□ -0.31
PRKCH-227ENST00000557599 GPTP24298 496 aa13.14□□□□□ -0.31
PRKCH-227ENST00000557599 RPAP2Q8IXW5 612 aaPredicted RBP13.14□□□□□ -0.31
PRKCH-227ENST00000557599 GPC2Q8N158 579 aa13.14□□□□□ -0.31
PRKCH-227ENST00000557599 SYNE4Q8N205 404 aa13.14□□□□□ -0.31
PRKCH-227ENST00000557599 CCDC191Q8NCU4 936 aa13.14□□□□□ -0.31
PRKCH-227ENST00000557599 MEIS3Q99687 375 aa13.14□□□□□ -0.31
PRKCH-227ENST00000557599 CWC25Q9NXE8 425 aaPredicted RBP13.14□□□□□ -0.31
PRKCH-227ENST00000557599 CNTNAP1P78357 1384 aa13.14□□□□□ -0.31
PRKCH-227ENST00000557599 TAF1P21675 1872 aa13.13□□□□□ -0.31
PRKCH-227ENST00000557599 NEURL1BA8MQ27 555 aa13.13□□□□□ -0.31
PRKCH-227ENST00000557599 GRM8O00222 908 aa13.13□□□□□ -0.31
PRKCH-227ENST00000557599 TCIRG1Q13488 830 aa13.13□□□□□ -0.31
PRKCH-227ENST00000557599 COL13A1Q5TAT6 717 aaPredicted RBP13.13□□□□□ -0.31
PRKCH-227ENST00000557599 RTFDC1Q9BY42 306 aaPredicted RBP13.13□□□□□ -0.31
PRKCH-227ENST00000557599 HSP90B1P14625 803 aaKnown RBP13.12□□□□□ -0.31
PRKCH-227ENST00000557599 HDAC1Q13547 482 aaPredicted RBP13.12□□□□□ -0.31
PRKCH-227ENST00000557599 GCKRQ14397 625 aa13.12□□□□□ -0.31
PRKCH-227ENST00000557599 CWF19L2Q2TBE0 894 aaKnown RBP13.12□□□□□ -0.31
PRKCH-227ENST00000557599 NLRP10Q86W26 655 aa13.12□□□□□ -0.31
PRKCH-227ENST00000557599 TRPM7Q96QT4 1865 aa13.11□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 29.3 ms