RNA–Protein interactions for RNA: ENST00000557566.1

SPTLC2-206, Transcript of serine palmitoyltransferase long chain base subunit 2, humanhuman

TSL 2

Gene SPTLC2, Length 510 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPTLC2-206ENST00000557566 ZNF454Q8N9F8 522 aa9.38□□□□□ -0.91
SPTLC2-206ENST00000557566 GTF3C3Q9Y5Q9 886 aa9.38□□□□□ -0.91
SPTLC2-206ENST00000557566 RNF123Q5XPI4 1314 aa9.37□□□□□ -0.91
SPTLC2-206ENST00000557566 WASHC2AQ641Q2 1341 aa9.37□□□□□ -0.91
SPTLC2-206ENST00000557566 ZNF541Q9H0D2 1346 aa9.37□□□□□ -0.91
SPTLC2-206ENST00000557566 AOC2O75106 756 aa9.37□□□□□ -0.91
SPTLC2-206ENST00000557566 BRPF1P55201 1214 aaPredicted RBP9.37□□□□□ -0.91
SPTLC2-206ENST00000557566 CNKSR1Q969H4 720 aa9.37□□□□□ -0.91
SPTLC2-206ENST00000557566 BRIP1Q9BX63 1249 aa9.37□□□□□ -0.91
SPTLC2-206ENST00000557566 TLL2Q9Y6L7 1015 aa9.37□□□□□ -0.91
SPTLC2-206ENST00000557566 ZMYND10O75800 440 aa9.36□□□□□ -0.91
SPTLC2-206ENST00000557566 PRPF40BQ6NWY9 871 aaKnown RBP9.36□□□□□ -0.91
SPTLC2-206ENST00000557566 BICDL1Q6ZP65 573 aa9.36□□□□□ -0.91
SPTLC2-206ENST00000557566 BCL2L12Q9HB09 334 aa9.36□□□□□ -0.91
SPTLC2-206ENST00000557566 ST20-MTHFSA0A0A6YYL1 179 aa9.35□□□□□ -0.91
SPTLC2-206ENST00000557566 MTHFSP49914 203 aa9.35□□□□□ -0.91
SPTLC2-206ENST00000557566 PLEKHO1Q53GL0 409 aaPredicted RBP9.35□□□□□ -0.91
SPTLC2-206ENST00000557566 RBM26Q5T8P6 1007 aaKnown RBP9.35□□□□□ -0.91
SPTLC2-206ENST00000557566 STYK1Q6J9G0 422 aa9.35□□□□□ -0.91
SPTLC2-206ENST00000557566 ZNF530Q6P9A1 599 aaPredicted RBP9.35□□□□□ -0.91
SPTLC2-206ENST00000557566 DNAJC10Q8IXB1 793 aa9.35□□□□□ -0.91
SPTLC2-206ENST00000557566 NFATC2IPQ8NCF5 419 aa9.35□□□□□ -0.91
SPTLC2-206ENST00000557566 SCN11AQ9UI33 1791 aa9.35□□□□□ -0.91
SPTLC2-206ENST00000557566 CCDC93Q567U6 631 aa9.34□□□□□ -0.91
SPTLC2-206ENST00000557566 C1orf141Q5JVX7 400 aa9.34□□□□□ -0.91
SPTLC2-206ENST00000557566 PPP4R3BQ5MIZ7 849 aa9.34□□□□□ -0.91
SPTLC2-206ENST00000557566 GPC2Q8N158 579 aa9.34□□□□□ -0.91
SPTLC2-206ENST00000557566 NBPF15Q8N660 670 aa9.34□□□□□ -0.91
SPTLC2-206ENST00000557566 SCN7AQ01118 1682 aa9.33□□□□□ -0.92
SPTLC2-206ENST00000557566 NPHP1O15259 732 aa9.33□□□□□ -0.92
SPTLC2-206ENST00000557566 CYP19A1P11511 503 aaPredicted RBP9.33□□□□□ -0.92
SPTLC2-206ENST00000557566 LMOD1P29536 600 aaPredicted RBP9.33□□□□□ -0.92
SPTLC2-206ENST00000557566 FKBP4Q02790 459 aaKnown RBP eCLIP9.33□□□□□ -0.92
SPTLC2-206ENST00000557566 FMR1Q06787 632 aaKnown RBP eCLIP9.33□□□□□ -0.92
SPTLC2-206ENST00000557566 AMOTQ4VCS5 1084 aa9.33□□□□□ -0.92
SPTLC2-206ENST00000557566 CST9Q5W186 159 aa9.33□□□□□ -0.92
SPTLC2-206ENST00000557566 PRR5LQ6MZQ0 368 aa9.33□□□□□ -0.92
SPTLC2-206ENST00000557566 MASTLQ96GX5 879 aa9.33□□□□□ -0.92
SPTLC2-206ENST00000557566 HHIPL1Q96JK4 782 aa9.33□□□□□ -0.92
SPTLC2-206ENST00000557566 TESK2Q96S53 571 aa9.33□□□□□ -0.92
SPTLC2-206ENST00000557566 ZBTB1Q9Y2K1 713 aa9.33□□□□□ -0.92
SPTLC2-206ENST00000557566 FZD9O00144 591 aa9.32□□□□□ -0.92
SPTLC2-206ENST00000557566 SRGNP10124 158 aa9.32□□□□□ -0.92
SPTLC2-206ENST00000557566 ST5P78524 1137 aa9.32□□□□□ -0.92
SPTLC2-206ENST00000557566 CIAPIN1Q6FI81 312 aa9.32□□□□□ -0.92
SPTLC2-206ENST00000557566 SAPCD2Q86UD0 394 aa9.32□□□□□ -0.92
SPTLC2-206ENST00000557566 GPIHBP1Q8IV16 184 aa9.32□□□□□ -0.92
SPTLC2-206ENST00000557566 CCDC24Q8N4L8 307 aa9.32□□□□□ -0.92
SPTLC2-206ENST00000557566 SIN3AQ96ST3 1273 aa9.32□□□□□ -0.92
SPTLC2-206ENST00000557566 ZNF277Q9NRM2 450 aaPredicted RBP9.32□□□□□ -0.92
SPTLC2-206ENST00000557566 BCORQ6W2J9 1755 aa9.32□□□□□ -0.92
SPTLC2-206ENST00000557566 A0A087WZG4 1122 aa9.31□□□□□ -0.92
SPTLC2-206ENST00000557566 TRAF5O00463 557 aa9.31□□□□□ -0.92
SPTLC2-206ENST00000557566 EIF4A2Q14240 407 aaKnown RBP9.31□□□□□ -0.92
SPTLC2-206ENST00000557566 HABP4Q5JVS0 413 aaKnown RBP9.31□□□□□ -0.92
SPTLC2-206ENST00000557566 TBC1D9BQ66K14 1250 aa9.31□□□□□ -0.92
SPTLC2-206ENST00000557566 USP50Q70EL3 339 aaPredicted RBP9.31□□□□□ -0.92
SPTLC2-206ENST00000557566 RTKN2Q8IZC4 609 aa9.31□□□□□ -0.92
SPTLC2-206ENST00000557566 CNBD1Q8NA66 436 aa9.31□□□□□ -0.92
SPTLC2-206ENST00000557566 AKAP11Q9UKA4 1901 aa9.31□□□□□ -0.92
SPTLC2-206ENST00000557566 CELF2O95319 508 aaKnown RBP9.3□□□□□ -0.92
SPTLC2-206ENST00000557566 OSBPP22059 807 aa9.3□□□□□ -0.92
SPTLC2-206ENST00000557566 IARSP41252 1262 aaKnown RBP9.3□□□□□ -0.92
SPTLC2-206ENST00000557566 NOGQ13253 232 aa9.3□□□□□ -0.92
SPTLC2-206ENST00000557566 C7orf43Q8WVR3 580 aa9.3□□□□□ -0.92
SPTLC2-206ENST00000557566 JDP2Q8WYK2 163 aa9.3□□□□□ -0.92
SPTLC2-206ENST00000557566 GJA3Q9Y6H8 435 aa9.3□□□□□ -0.92
SPTLC2-206ENST00000557566 CANXP27824 592 aaKnown RBP9.29□□□□□ -0.92
SPTLC2-206ENST00000557566 EIF6P56537 245 aaKnown RBP9.29□□□□□ -0.92
SPTLC2-206ENST00000557566 LSM11P83369 360 aaKnown RBP eCLIP9.29□□□□□ -0.92
SPTLC2-206ENST00000557566 TYW1BQ6NUM6 668 aa9.29□□□□□ -0.92
SPTLC2-206ENST00000557566 SETDB2Q96T68 719 aa9.29□□□□□ -0.92
SPTLC2-206ENST00000557566 SAGE1Q9NXZ1 904 aa9.29□□□□□ -0.92
SPTLC2-206ENST00000557566 MKI67P46013 3256 aaKnown RBP9.29□□□□□ -0.92
SPTLC2-206ENST00000557566 GPR37O15354 613 aa9.28□□□□□ -0.92
SPTLC2-206ENST00000557566 MAP3K7O43318 606 aa9.28□□□□□ -0.92
SPTLC2-206ENST00000557566 NPR1P16066 1061 aa9.28□□□□□ -0.92
SPTLC2-206ENST00000557566 EPS15P42566 896 aa9.28□□□□□ -0.92
SPTLC2-206ENST00000557566 SCNN1DP51172 638 aa9.28□□□□□ -0.92
SPTLC2-206ENST00000557566 FOSBP53539 338 aa9.28□□□□□ -0.92
SPTLC2-206ENST00000557566 EIF5P55010 431 aaKnown RBP9.28□□□□□ -0.92
SPTLC2-206ENST00000557566 CTU1Q7Z7A3 348 aaKnown RBP9.28□□□□□ -0.92
SPTLC2-206ENST00000557566 ZDHHC16Q969W1 377 aa9.28□□□□□ -0.92
SPTLC2-206ENST00000557566 SLC52A2Q9HAB3 445 aa9.28□□□□□ -0.92
SPTLC2-206ENST00000557566 POLKQ9UBT6 870 aa9.28□□□□□ -0.92
SPTLC2-206ENST00000557566 PCDHGA10Q9Y5H3 936 aa9.28□□□□□ -0.92
SPTLC2-206ENST00000557566 STARD3NLO95772 234 aa9.27□□□□□ -0.93
SPTLC2-206ENST00000557566 AKAP4Q5JQC9 854 aa9.27□□□□□ -0.93
SPTLC2-206ENST00000557566 SYNE4Q8N205 404 aa9.27□□□□□ -0.93
SPTLC2-206ENST00000557566 EPAS1Q99814 870 aa9.27□□□□□ -0.93
SPTLC2-206ENST00000557566 PLA2G2EQ9NZK7 142 aa9.27□□□□□ -0.93
SPTLC2-206ENST00000557566 UBR2Q8IWV8 1755 aa9.27□□□□□ -0.93
SPTLC2-206ENST00000557566 SLC39A6Q13433 755 aa9.26□□□□□ -0.93
SPTLC2-206ENST00000557566 NPM2Q86SE8 214 aaKnown RBP9.26□□□□□ -0.93
SPTLC2-206ENST00000557566 FBXW7Q969H0 707 aa9.26□□□□□ -0.93
SPTLC2-206ENST00000557566 PSMD1Q99460 953 aa9.26□□□□□ -0.93
SPTLC2-206ENST00000557566 ZNF408Q9H9D4 720 aa9.26□□□□□ -0.93
SPTLC2-206ENST00000557566 MRC1P22897 1456 aa9.26□□□□□ -0.93
SPTLC2-206ENST00000557566 A0A0C4DFX4 3053 aa9.25□□□□□ -0.93
SPTLC2-206ENST00000557566 CDCA8Q53HL2 280 aa9.25□□□□□ -0.93
Retrieved 100 of 20,778 RNA–protein pairs in 34.9 ms