RNA–Protein interactions for RNA: ENST00000557539.1

MTHFD1-216, Transcript of methylenetetrahydrofolate dehydrogenase, cyclohydrolase and formyltetrahydrofolate synthetase 1, humanhuman

TSL 4

Gene MTHFD1, Length 509 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MTHFD1-216ENST00000557539 WASLO00401 505 aaPredicted RBP7.33□□□□□ -1.24
MTHFD1-216ENST00000557539 FGD1P98174 961 aa7.33□□□□□ -1.24
MTHFD1-216ENST00000557539 KRT76Q01546 638 aa7.33□□□□□ -1.24
MTHFD1-216ENST00000557539 DSC3Q14574 896 aa7.33□□□□□ -1.24
MTHFD1-216ENST00000557539 COX20Q5RI15 118 aa7.33□□□□□ -1.24
MTHFD1-216ENST00000557539 LDLRAD1Q5T700 205 aa7.33□□□□□ -1.24
MTHFD1-216ENST00000557539 PIK3R5Q8WYR1 880 aa7.33□□□□□ -1.24
MTHFD1-216ENST00000557539 DMRTB1Q96MA1 342 aa7.33□□□□□ -1.24
MTHFD1-216ENST00000557539 RNF19AQ9NV58 838 aa7.33□□□□□ -1.24
MTHFD1-216ENST00000557539 STIM2Q9P246 746 aa7.33□□□□□ -1.24
MTHFD1-216ENST00000557539 ABCA5Q8WWZ7 1642 aa7.33□□□□□ -1.24
MTHFD1-216ENST00000557539 RUSC2Q8N2Y8 1516 aa7.32□□□□□ -1.24
MTHFD1-216ENST00000557539 TNFRSF10BO14763 440 aa7.32□□□□□ -1.24
MTHFD1-216ENST00000557539 RBM6P78332 1123 aaKnown RBP7.32□□□□□ -1.24
MTHFD1-216ENST00000557539 SLC9A9Q8IVB4 645 aa7.32□□□□□ -1.24
MTHFD1-216ENST00000557539 CCDC155Q8N6L0 562 aa7.32□□□□□ -1.24
MTHFD1-216ENST00000557539 RNF217Q8TC41 542 aa7.32□□□□□ -1.24
MTHFD1-216ENST00000557539 VTI1BQ9UEU0 232 aa7.32□□□□□ -1.24
MTHFD1-216ENST00000557539 WWC3Q9ULE0 1092 aa7.32□□□□□ -1.24
MTHFD1-216ENST00000557539 UACAQ9BZF9 1416 aa7.32□□□□□ -1.24
MTHFD1-216ENST00000557539 FRMPD1Q5SYB0 1578 aa7.32□□□□□ -1.24
MTHFD1-216ENST00000557539 ZCCHC11Q5TAX3 1644 aaKnown RBP7.31□□□□□ -1.24
MTHFD1-216ENST00000557539 GPR182O15218 404 aa7.31□□□□□ -1.24
MTHFD1-216ENST00000557539 SMARCA5O60264 1052 aaPredicted RBP7.31□□□□□ -1.24
MTHFD1-216ENST00000557539 SORBS3O60504 671 aa7.31□□□□□ -1.24
MTHFD1-216ENST00000557539 ATP2B2Q01814 1243 aa7.31□□□□□ -1.24
MTHFD1-216ENST00000557539 RAD51AP2Q09MP3 1159 aa7.31□□□□□ -1.24
MTHFD1-216ENST00000557539 PSMD2Q13200 908 aa7.31□□□□□ -1.24
MTHFD1-216ENST00000557539 PDE3BQ13370 1112 aa7.31□□□□□ -1.24
MTHFD1-216ENST00000557539 NT5DC4Q86YG4 428 aa7.31□□□□□ -1.24
MTHFD1-216ENST00000557539 SLC4A9Q96Q91 983 aa7.31□□□□□ -1.24
MTHFD1-216ENST00000557539 SETDB2Q96T68 719 aa7.31□□□□□ -1.24
MTHFD1-216ENST00000557539 C2orf49Q9BVC5 232 aaPredicted RBP7.31□□□□□ -1.24
MTHFD1-216ENST00000557539 POLMQ9NP87 494 aaPredicted RBP7.31□□□□□ -1.24
MTHFD1-216ENST00000557539 JCADQ9P266 1359 aa7.31□□□□□ -1.24
MTHFD1-216ENST00000557539 ITGAEP38570 1179 aa7.3□□□□□ -1.24
MTHFD1-216ENST00000557539 PTGIRP43119 386 aa7.3□□□□□ -1.24
MTHFD1-216ENST00000557539 DAB2P98082 770 aa7.3□□□□□ -1.24
MTHFD1-216ENST00000557539 FOXK2Q01167 660 aa7.3□□□□□ -1.24
MTHFD1-216ENST00000557539 TMC4Q7Z404 712 aa7.3□□□□□ -1.24
MTHFD1-216ENST00000557539 DEFB132Q7Z7B7 95 aa7.3□□□□□ -1.24
MTHFD1-216ENST00000557539 ABTB2Q8N961 1025 aa7.3□□□□□ -1.24
MTHFD1-216ENST00000557539 NANOS1Q8WY41 292 aaKnown RBP7.3□□□□□ -1.24
MTHFD1-216ENST00000557539 FAM129BQ96TA1 746 aa7.3□□□□□ -1.24
MTHFD1-216ENST00000557539 NIF3L1Q9GZT8 377 aa7.3□□□□□ -1.24
MTHFD1-216ENST00000557539 SCHIP1Q9P0W5 487 aaPredicted RBP7.3□□□□□ -1.24
MTHFD1-216ENST00000557539 LRP6O75581 1613 aa7.3□□□□□ -1.24
MTHFD1-216ENST00000557539 TCOF1Q13428 1488 aaKnown RBP7.3□□□□□ -1.24
MTHFD1-216ENST00000557539 FAM135BQ49AJ0 1406 aa7.29□□□□□ -1.24
MTHFD1-216ENST00000557539 A6NJY4 79 aa7.29□□□□□ -1.24
MTHFD1-216ENST00000557539 ZBTB39O15060 712 aa7.29□□□□□ -1.24
MTHFD1-216ENST00000557539 IGHA2P01877 340 aa7.29□□□□□ -1.24
MTHFD1-216ENST00000557539 HSPA6P17066 643 aa7.29□□□□□ -1.24
MTHFD1-216ENST00000557539 ESCO1Q5FWF5 840 aa7.29□□□□□ -1.24
MTHFD1-216ENST00000557539 CYP2U1Q7Z449 544 aa7.29□□□□□ -1.24
MTHFD1-216ENST00000557539 METTL16Q86W50 562 aaKnown RBP7.29□□□□□ -1.24
MTHFD1-216ENST00000557539 ATCAYQ86WG3 371 aa7.29□□□□□ -1.24
MTHFD1-216ENST00000557539 STAG2Q8N3U4 1231 aa7.29□□□□□ -1.24
MTHFD1-216ENST00000557539 RNF34Q969K3 372 aa7.29□□□□□ -1.24
MTHFD1-216ENST00000557539 NGLY1Q96IV0 654 aa7.29□□□□□ -1.24
MTHFD1-216ENST00000557539 QTRT2Q9H974 415 aaKnown RBP7.29□□□□□ -1.24
MTHFD1-216ENST00000557539 RAB6BQ9NRW1 208 aa7.29□□□□□ -1.24
MTHFD1-216ENST00000557539 LRFN2Q9ULH4 789 aa7.29□□□□□ -1.24
MTHFD1-216ENST00000557539 RNF17Q9BXT8 1623 aaKnown RBP7.29□□□□□ -1.24
MTHFD1-216ENST00000557539 TNIKQ9UKE5 1360 aa7.29□□□□□ -1.24
MTHFD1-216ENST00000557539 FAM181BA6NEQ2 426 aa7.28□□□□□ -1.24
MTHFD1-216ENST00000557539 SMTNP53814 917 aa7.28□□□□□ -1.24
MTHFD1-216ENST00000557539 PSMA6P60900 246 aaKnown RBP7.28□□□□□ -1.24
MTHFD1-216ENST00000557539 SPATA32Q96LK8 384 aa7.28□□□□□ -1.24
MTHFD1-216ENST00000557539 TANGO6Q9C0B7 1094 aa7.28□□□□□ -1.24
MTHFD1-216ENST00000557539 CCSER2Q9H7U1 834 aa7.28□□□□□ -1.24
MTHFD1-216ENST00000557539 POLIQ9UNA4 740 aa7.28□□□□□ -1.24
MTHFD1-216ENST00000557539 CHMP3Q9Y3E7 222 aa7.28□□□□□ -1.24
MTHFD1-216ENST00000557539 PLA2R1Q13018 1463 aa7.28□□□□□ -1.24
MTHFD1-216ENST00000557539 BCL9LQ86UU0 1499 aa7.28□□□□□ -1.24
MTHFD1-216ENST00000557539 PNMA6FA0A0J9YX94 578 aa7.27□□□□□ -1.25
MTHFD1-216ENST00000557539 GNRH1P01148 92 aa7.27□□□□□ -1.25
MTHFD1-216ENST00000557539 ITGA6P23229 1130 aa7.27□□□□□ -1.25
MTHFD1-216ENST00000557539 FANCCQ00597 558 aa7.27□□□□□ -1.25
MTHFD1-216ENST00000557539 FAM26DQ5JW98 314 aa7.27□□□□□ -1.25
MTHFD1-216ENST00000557539 RNFT1Q5M7Z0 435 aa7.27□□□□□ -1.25
MTHFD1-216ENST00000557539 ALKBH8Q96BT7 664 aaKnown RBP7.27□□□□□ -1.25
MTHFD1-216ENST00000557539 CNTNAP3BQ96NU0 1288 aa7.27□□□□□ -1.25
MTHFD1-216ENST00000557539 CNTNAP3Q9BZ76 1288 aa7.27□□□□□ -1.25
MTHFD1-216ENST00000557539 RAPGEF2Q9Y4G8 1499 aa7.27□□□□□ -1.25
MTHFD1-216ENST00000557539 AFF2P51816 1311 aa7.27□□□□□ -1.25
MTHFD1-216ENST00000557539 BRD2P25440 801 aaKnown RBP7.26□□□□□ -1.25
MTHFD1-216ENST00000557539 ZNF76P36508 570 aa7.26□□□□□ -1.25
MTHFD1-216ENST00000557539 DNM1Q05193 864 aaKnown RBP7.26□□□□□ -1.25
MTHFD1-216ENST00000557539 MTFR1Q15390 333 aa7.26□□□□□ -1.25
MTHFD1-216ENST00000557539 ENOX2Q16206 610 aaKnown RBP7.26□□□□□ -1.25
MTHFD1-216ENST00000557539 VWA5B2Q8N398 1253 aa7.26□□□□□ -1.25
MTHFD1-216ENST00000557539 COL25A1Q9BXS0 654 aaPredicted RBP7.26□□□□□ -1.25
MTHFD1-216ENST00000557539 CAPN10Q9HC96 672 aa7.26□□□□□ -1.25
MTHFD1-216ENST00000557539 ARHGEF10LQ9HCE6 1279 aa7.26□□□□□ -1.25
MTHFD1-216ENST00000557539 METTL5Q9NRN9 209 aaKnown RBP7.26□□□□□ -1.25
MTHFD1-216ENST00000557539 USP3Q9Y6I4 520 aa7.26□□□□□ -1.25
MTHFD1-216ENST00000557539 CANXP27824 592 aaKnown RBP7.25□□□□□ -1.25
MTHFD1-216ENST00000557539 RNF144AP50876 292 aaPredicted RBP7.25□□□□□ -1.25
MTHFD1-216ENST00000557539 ALG1LQ6GMV1 187 aa7.25□□□□□ -1.25
Retrieved 100 of 20,778 RNA–protein pairs in 12.2 ms