RNA–Protein interactions for RNA: ENST00000557394.5

SUPT16H-207, Transcript of SPT16 homolog, facilitates chromatin remodeling subunit, humanhuman

TSL 2

Gene SUPT16H, Length 2,324 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SUPT16H-207ENST00000557394 AOX1Q06278 1338 aa12.28□□□□□ -0.44
SUPT16H-207ENST00000557394 TTC21AQ8NDW8 1320 aa12.28□□□□□ -0.44
SUPT16H-207ENST00000557394 NRDCO43847 1150 aa12.28□□□□□ -0.44
SUPT16H-207ENST00000557394 SKILP12757 684 aa12.28□□□□□ -0.44
SUPT16H-207ENST00000557394 LMOD3Q0VAK6 560 aa12.28□□□□□ -0.44
SUPT16H-207ENST00000557394 NEK11Q8NG66 645 aa12.28□□□□□ -0.44
SUPT16H-207ENST00000557394 ATL2Q8NHH9 583 aa12.28□□□□□ -0.44
SUPT16H-207ENST00000557394 IL25Q9H293 177 aa12.28□□□□□ -0.44
SUPT16H-207ENST00000557394 CLSTN2Q9H4D0 955 aa12.28□□□□□ -0.44
SUPT16H-207ENST00000557394 SUGT1Q9Y2Z0 365 aa12.28□□□□□ -0.44
SUPT16H-207ENST00000557394 SNX14Q9Y5W7 946 aa12.28□□□□□ -0.44
SUPT16H-207ENST00000557394 GJB2P29033 226 aa12.28□□□□□ -0.44
SUPT16H-207ENST00000557394 TNNT3P45378 269 aaPredicted RBP12.28□□□□□ -0.44
SUPT16H-207ENST00000557394 ZNF165P49910 485 aa12.28□□□□□ -0.44
SUPT16H-207ENST00000557394 ERCC6LQ2NKX8 1250 aa12.28□□□□□ -0.44
SUPT16H-207ENST00000557394 GORABQ5T7V8 394 aa12.28□□□□□ -0.44
SUPT16H-207ENST00000557394 MYO1CO00159 1063 aa12.27□□□□□ -0.44
SUPT16H-207ENST00000557394 CASQ1P31415 396 aa12.27□□□□□ -0.44
SUPT16H-207ENST00000557394 SSR1P43307 286 aaKnown RBP12.27□□□□□ -0.44
SUPT16H-207ENST00000557394 CAMK4Q16566 473 aa12.27□□□□□ -0.44
SUPT16H-207ENST00000557394 TSHZ3Q63HK5 1081 aa12.27□□□□□ -0.44
SUPT16H-207ENST00000557394 SLC26A8Q96RN1 970 aa12.27□□□□□ -0.44
SUPT16H-207ENST00000557394 XRN1Q8IZH2 1706 aaKnown RBP12.27□□□□□ -0.45
SUPT16H-207ENST00000557394 KRT85P78386 507 aa12.27□□□□□ -0.45
SUPT16H-207ENST00000557394 ARID5BQ14865 1188 aa12.27□□□□□ -0.45
SUPT16H-207ENST00000557394 KRBA2Q6ZNG9 492 aa12.27□□□□□ -0.45
SUPT16H-207ENST00000557394 GET4Q7L5D6 327 aaPredicted RBP12.27□□□□□ -0.45
SUPT16H-207ENST00000557394 CKAP2LQ8IYA6 745 aa12.27□□□□□ -0.45
SUPT16H-207ENST00000557394 DACT1Q9NYF0 836 aa12.27□□□□□ -0.45
SUPT16H-207ENST00000557394 IQCB1Q15051 598 aa12.26□□□□□ -0.45
SUPT16H-207ENST00000557394 FILIP1Q7Z7B0 1213 aa12.26□□□□□ -0.45
SUPT16H-207ENST00000557394 RILPL2Q969X0 211 aa12.26□□□□□ -0.45
SUPT16H-207ENST00000557394 SIRT1Q96EB6 747 aa12.26□□□□□ -0.45
SUPT16H-207ENST00000557394 CHD2O14647 1828 aaKnown RBP12.26□□□□□ -0.45
SUPT16H-207ENST00000557394 ADGRL3Q9HAR2 1447 aa12.26□□□□□ -0.45
SUPT16H-207ENST00000557394 LARGE1O95461 756 aa12.26□□□□□ -0.45
SUPT16H-207ENST00000557394 TUBB4AP04350 444 aa12.26□□□□□ -0.45
SUPT16H-207ENST00000557394 UNC5CLQ8IV45 518 aa12.26□□□□□ -0.45
SUPT16H-207ENST00000557394 ANKRD13AQ8IZ07 590 aa12.26□□□□□ -0.45
SUPT16H-207ENST00000557394 IQUBQ8NA54 791 aa12.26□□□□□ -0.45
SUPT16H-207ENST00000557394 LRRCC1Q9C099 1032 aa12.26□□□□□ -0.45
SUPT16H-207ENST00000557394 RAI14Q9P0K7 980 aa12.26□□□□□ -0.45
SUPT16H-207ENST00000557394 DLG5Q8TDM6 1919 aa12.26□□□□□ -0.45
SUPT16H-207ENST00000557394 NCKAP5LQ9HCH0 1330 aa12.25□□□□□ -0.45
SUPT16H-207ENST00000557394 KIF20BQ96Q89 1820 aa12.25□□□□□ -0.45
SUPT16H-207ENST00000557394 CCDC69A6NI79 296 aa12.25□□□□□ -0.45
SUPT16H-207ENST00000557394 SATB1Q01826 763 aa12.25□□□□□ -0.45
SUPT16H-207ENST00000557394 ZSCAN26Q16670 478 aa12.25□□□□□ -0.45
SUPT16H-207ENST00000557394 ICE2Q659A1 982 aa12.25□□□□□ -0.45
SUPT16H-207ENST00000557394 DDX46Q7L014 1031 aaKnown RBP12.25□□□□□ -0.45
SUPT16H-207ENST00000557394 SMARCE1Q969G3 411 aa12.25□□□□□ -0.45
SUPT16H-207ENST00000557394 ZSCAN31Q96LW9 406 aaPredicted RBP12.25□□□□□ -0.45
SUPT16H-207ENST00000557394 DNAJC25Q9H1X3 360 aa12.25□□□□□ -0.45
SUPT16H-207ENST00000557394 SH2B1Q9NRF2 756 aaPredicted RBP12.25□□□□□ -0.45
SUPT16H-207ENST00000557394 HYPKQ9NX55 129 aa12.25□□□□□ -0.45
SUPT16H-207ENST00000557394 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP12.25□□□□□ -0.458e-8■■■■□ 26.7
SUPT16H-207ENST00000557394 NPHP3Q7Z494 1330 aa12.25□□□□□ -0.45
SUPT16H-207ENST00000557394 PTPRUQ92729 1446 aa12.25□□□□□ -0.45
SUPT16H-207ENST00000557394 ST5P78524 1137 aa12.25□□□□□ -0.45
SUPT16H-207ENST00000557394 GPS2Q13227 327 aa12.25□□□□□ -0.45
SUPT16H-207ENST00000557394 MTA1Q13330 715 aa12.25□□□□□ -0.45
SUPT16H-207ENST00000557394 LRRN4CLQ8ND94 238 aa12.25□□□□□ -0.45
SUPT16H-207ENST00000557394 LSG1Q9H089 658 aaKnown RBP12.25□□□□□ -0.45
SUPT16H-207ENST00000557394 BRMS1Q9HCU9 246 aa12.25□□□□□ -0.45
SUPT16H-207ENST00000557394 ARGLU1Q9NWB6 273 aaPredicted RBP12.25□□□□□ -0.45
SUPT16H-207ENST00000557394 PSD3Q9NYI0 1048 aa12.25□□□□□ -0.45
SUPT16H-207ENST00000557394 CWC15Q9P013 229 aaKnown RBP12.25□□□□□ -0.45
SUPT16H-207ENST00000557394 LCMT1Q9UIC8 334 aa12.25□□□□□ -0.45
SUPT16H-207ENST00000557394 LRRFIP2Q9Y608 721 aaKnown RBP12.25□□□□□ -0.45
SUPT16H-207ENST00000557394 SGSM2O43147 1006 aa12.24□□□□□ -0.45
SUPT16H-207ENST00000557394 PEX14O75381 377 aa12.24□□□□□ -0.45
SUPT16H-207ENST00000557394 KCNJ6P48051 423 aa12.24□□□□□ -0.45
SUPT16H-207ENST00000557394 ST3GAL1Q11201 340 aa12.24□□□□□ -0.45
SUPT16H-207ENST00000557394 ARHGAP29Q52LW3 1261 aa12.24□□□□□ -0.45
SUPT16H-207ENST00000557394 TMCO3Q6UWJ1 677 aa12.24□□□□□ -0.45
SUPT16H-207ENST00000557394 SRLQ86TD4 932 aa12.24□□□□□ -0.45
SUPT16H-207ENST00000557394 RASEFQ8IZ41 740 aa12.24□□□□□ -0.45
SUPT16H-207ENST00000557394 FBXO18Q8NFZ0 1043 aa12.24□□□□□ -0.45
SUPT16H-207ENST00000557394 TRMT1Q9NXH9 659 aaKnown RBP12.24□□□□□ -0.45
SUPT16H-207ENST00000557394 ORC3Q9UBD5 711 aaPredicted RBP12.24□□□□□ -0.45
SUPT16H-207ENST00000557394 STRCQ7RTU9 1775 aa12.23□□□□□ -0.45
SUPT16H-207ENST00000557394 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP12.23□□□□□ -0.45
SUPT16H-207ENST00000557394 TRIM66O15016 1216 aa12.23□□□□□ -0.45
SUPT16H-207ENST00000557394 HMOX1P09601 288 aa12.23□□□□□ -0.45
SUPT16H-207ENST00000557394 GTF2A1P52655 376 aaPredicted RBP12.23□□□□□ -0.45
SUPT16H-207ENST00000557394 RHBDL3P58872 404 aa12.23□□□□□ -0.45
SUPT16H-207ENST00000557394 SNW1Q13573 536 aaKnown RBP12.23□□□□□ -0.45
SUPT16H-207ENST00000557394 ANKRD23Q86SG2 305 aa12.23□□□□□ -0.45
SUPT16H-207ENST00000557394 CCDC83Q8IWF9 413 aa12.23□□□□□ -0.45
SUPT16H-207ENST00000557394 GOLGA5Q8TBA6 731 aa12.23□□□□□ -0.45
SUPT16H-207ENST00000557394 ZBTB9Q96C00 473 aa12.23□□□□□ -0.45
SUPT16H-207ENST00000557394 PRAM1Q96QH2 718 aa12.23□□□□□ -0.45
SUPT16H-207ENST00000557394 TRAIPQ9BWF2 469 aa12.23□□□□□ -0.45
SUPT16H-207ENST00000557394 EXOC6BQ9Y2D4 811 aa12.23□□□□□ -0.45
SUPT16H-207ENST00000557394 PSDA5PKW4 1024 aaPredicted RBP12.23□□□□□ -0.45
SUPT16H-207ENST00000557394 ZNF280DQ6N043 979 aa12.23□□□□□ -0.45
SUPT16H-207ENST00000557394 C10orf67Q8IYJ2 551 aa12.23□□□□□ -0.45
SUPT16H-207ENST00000557394 CCDC191Q8NCU4 936 aa12.23□□□□□ -0.45
SUPT16H-207ENST00000557394 SCAND2PQ9GZW5 306 aaPredicted RBP12.23□□□□□ -0.45
SUPT16H-207ENST00000557394 VPS37CA5D8V6 355 aaPredicted RBP12.22□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 29.5 ms