RNA–Protein interactions for RNA: ENST00000557382.1

PPP4R3A-212, Transcript of protein phosphatase 4 regulatory subunit 3A, humanhuman

TSL 1 (best)

Gene PPP4R3A, Length 844 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPP4R3A-212ENST00000557382 RBM8AQ9Y5S9 174 aaKnown RBP10.73□□□□□ -0.69
PPP4R3A-212ENST00000557382 RPAP1Q9BWH6 1393 aaPredicted RBP10.73□□□□□ -0.69
PPP4R3A-212ENST00000557382 DISP2A7MBM2 1401 aa10.73□□□□□ -0.69
PPP4R3A-212ENST00000557382 WNK3Q9BYP7 1800 aa10.72□□□□□ -0.69
PPP4R3A-212ENST00000557382 ATP5J2-PTCD1G3V325 749 aa10.72□□□□□ -0.69
PPP4R3A-212ENST00000557382 PTCD1O75127 700 aaKnown RBP10.72□□□□□ -0.69
PPP4R3A-212ENST00000557382 MYCNP04198 464 aaPredicted RBP10.72□□□□□ -0.69
PPP4R3A-212ENST00000557382 CASTP20810 708 aaKnown RBP10.72□□□□□ -0.69
PPP4R3A-212ENST00000557382 TCIRG1Q13488 830 aa10.72□□□□□ -0.69
PPP4R3A-212ENST00000557382 CREB3L3Q68CJ9 461 aa10.72□□□□□ -0.69
PPP4R3A-212ENST00000557382 PRPF40BQ6NWY9 871 aaKnown RBP10.72□□□□□ -0.69
PPP4R3A-212ENST00000557382 LMBR1LQ6UX01 489 aa10.72□□□□□ -0.69
PPP4R3A-212ENST00000557382 TMEM87AQ8NBN3 555 aa10.72□□□□□ -0.69
PPP4R3A-212ENST00000557382 TLR7Q9NYK1 1049 aaKnown RBP10.72□□□□□ -0.69
PPP4R3A-212ENST00000557382 DBNLQ9UJU6 430 aaKnown RBP10.72□□□□□ -0.69
PPP4R3A-212ENST00000557382 ATP6V1DQ9Y5K8 247 aa10.72□□□□□ -0.69
PPP4R3A-212ENST00000557382 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP10.72□□□□□ -0.69
PPP4R3A-212ENST00000557382 PALLDQ8WX93 1383 aa10.72□□□□□ -0.69
PPP4R3A-212ENST00000557382 AHDC1Q5TGY3 1603 aaPredicted RBP10.72□□□□□ -0.69
PPP4R3A-212ENST00000557382 TCHHQ07283 1943 aa10.72□□□□□ -0.69
PPP4R3A-212ENST00000557382 SLC27A2O14975 620 aa10.71□□□□□ -0.69
PPP4R3A-212ENST00000557382 PRPF40AO75400 957 aaKnown RBP10.71□□□□□ -0.69
PPP4R3A-212ENST00000557382 A1BGP04217 495 aa10.71□□□□□ -0.69
PPP4R3A-212ENST00000557382 KCNJ4P48050 445 aa10.71□□□□□ -0.69
PPP4R3A-212ENST00000557382 ANKRD36CQ5JPF3 1778 aa10.71□□□□□ -0.69
PPP4R3A-212ENST00000557382 TTLL7Q6ZT98 887 aa10.71□□□□□ -0.69
PPP4R3A-212ENST00000557382 KLHDC4Q8TBB5 520 aa10.71□□□□□ -0.69
PPP4R3A-212ENST00000557382 JAKMIP1Q96N16 626 aaKnown RBP10.71□□□□□ -0.69
PPP4R3A-212ENST00000557382 SMC3Q9UQE7 1217 aa10.71□□□□□ -0.69
PPP4R3A-212ENST00000557382 SH3TC1Q8TE82 1336 aa10.7□□□□□ -0.7
PPP4R3A-212ENST00000557382 A0A0D9SFI3 127 aa10.7□□□□□ -0.7
PPP4R3A-212ENST00000557382 EYA2O00167 538 aa10.7□□□□□ -0.7
PPP4R3A-212ENST00000557382 STARD3NLO95772 234 aa10.7□□□□□ -0.7
PPP4R3A-212ENST00000557382 PCCAP05165 728 aaPredicted RBP10.7□□□□□ -0.7
PPP4R3A-212ENST00000557382 PIP4K2AP48426 406 aaPredicted RBP10.7□□□□□ -0.7
PPP4R3A-212ENST00000557382 HSP90AB3PQ58FF7 597 aa10.7□□□□□ -0.7
PPP4R3A-212ENST00000557382 ATG9AQ7Z3C6 839 aa10.7□□□□□ -0.7
PPP4R3A-212ENST00000557382 GAS2L3Q86XJ1 694 aa10.7□□□□□ -0.7
PPP4R3A-212ENST00000557382 KBTBD3Q8NAB2 608 aa10.7□□□□□ -0.7
PPP4R3A-212ENST00000557382 DDX54Q8TDD1 881 aaKnown RBP10.7□□□□□ -0.7
PPP4R3A-212ENST00000557382 SYAP1Q96A49 352 aaPredicted RBP10.7□□□□□ -0.7
PPP4R3A-212ENST00000557382 FAM227BQ96M60 508 aa10.7□□□□□ -0.7
PPP4R3A-212ENST00000557382 STRN4Q9NRL3 753 aa10.7□□□□□ -0.7
PPP4R3A-212ENST00000557382 MYH3P11055 1940 aa10.7□□□□□ -0.7
PPP4R3A-212ENST00000557382 ZNF609O15014 1411 aa10.69□□□□□ -0.7
PPP4R3A-212ENST00000557382 ABCC12Q96J65 1359 aa10.69□□□□□ -0.7
PPP4R3A-212ENST00000557382 CDHR2Q9BYE9 1310 aa10.69□□□□□ -0.7
PPP4R3A-212ENST00000557382 TAF5LO75529 589 aa10.69□□□□□ -0.7
PPP4R3A-212ENST00000557382 ZSCAN22P10073 491 aaPredicted RBP10.69□□□□□ -0.7
PPP4R3A-212ENST00000557382 NCLP19338 710 aaKnown RBP10.69□□□□□ -0.7
PPP4R3A-212ENST00000557382 CSPP1Q1MSJ5 1256 aa10.69□□□□□ -0.7
PPP4R3A-212ENST00000557382 LRRFIP1Q32MZ4 808 aaKnown RBP10.69□□□□□ -0.7
PPP4R3A-212ENST00000557382 ZSCAN23Q3MJ62 389 aa10.69□□□□□ -0.7
PPP4R3A-212ENST00000557382 MCMDC2Q4G0Z9 681 aa10.69□□□□□ -0.7
PPP4R3A-212ENST00000557382 BLOC1S2Q6QNY1 142 aa10.69□□□□□ -0.7
PPP4R3A-212ENST00000557382 KIF6Q6ZMV9 814 aa10.69□□□□□ -0.7
PPP4R3A-212ENST00000557382 DBNDD2Q9BQY9 259 aa10.69□□□□□ -0.7
PPP4R3A-212ENST00000557382 CDCA7Q9BWT1 371 aaPredicted RBP10.69□□□□□ -0.7
PPP4R3A-212ENST00000557382 HELLSQ9NRZ9 838 aa10.69□□□□□ -0.7
PPP4R3A-212ENST00000557382 AKAP2Q9Y2D5 859 aa10.69□□□□□ -0.7
PPP4R3A-212ENST00000557382 STX6O43752 255 aa10.68□□□□□ -0.7
PPP4R3A-212ENST00000557382 PDCP20941 246 aa10.68□□□□□ -0.7
PPP4R3A-212ENST00000557382 RPS6KB1P23443 525 aa10.68□□□□□ -0.7
PPP4R3A-212ENST00000557382 ADCK5Q3MIX3 580 aa10.68□□□□□ -0.7
PPP4R3A-212ENST00000557382 CAVIN1Q6NZI2 390 aaKnown RBP10.68□□□□□ -0.7
PPP4R3A-212ENST00000557382 NOL8Q76FK4 1167 aaKnown RBP10.68□□□□□ -0.7
PPP4R3A-212ENST00000557382 GPT2Q8TD30 523 aa10.68□□□□□ -0.7
PPP4R3A-212ENST00000557382 ANP32BQ92688 251 aaKnown RBP10.68□□□□□ -0.7
PPP4R3A-212ENST00000557382 BCL9O00512 1426 aa10.67□□□□□ -0.7
PPP4R3A-212ENST00000557382 MAP3K15Q6ZN16 1313 aa10.67□□□□□ -0.7
PPP4R3A-212ENST00000557382 CICQ96RK0 1608 aaPredicted RBP10.67□□□□□ -0.7
PPP4R3A-212ENST00000557382 PHF14O94880 888 aa10.67□□□□□ -0.7
PPP4R3A-212ENST00000557382 F13A1P00488 732 aa10.67□□□□□ -0.7
PPP4R3A-212ENST00000557382 CSF1RP07333 972 aa10.67□□□□□ -0.7
PPP4R3A-212ENST00000557382 HMGB1P09429 215 aaKnown RBP10.67□□□□□ -0.7
PPP4R3A-212ENST00000557382 CCDC173Q0VFZ6 552 aa10.67□□□□□ -0.7
PPP4R3A-212ENST00000557382 LRSAM1Q6UWE0 723 aa10.67□□□□□ -0.7
PPP4R3A-212ENST00000557382 GIGYF2Q6Y7W6 1299 aaKnown RBP10.67□□□□□ -0.7
PPP4R3A-212ENST00000557382 ZBTB38Q8NAP3 1195 aaPredicted RBP10.67□□□□□ -0.7
PPP4R3A-212ENST00000557382 PIGBQ92521 554 aa10.67□□□□□ -0.7
PPP4R3A-212ENST00000557382 JARID2Q92833 1246 aaPredicted RBP10.67□□□□□ -0.7
PPP4R3A-212ENST00000557382 CHMP4CQ96CF2 233 aa10.67□□□□□ -0.7
PPP4R3A-212ENST00000557382 PPP1R9BQ96SB3 815 aa10.67□□□□□ -0.7
PPP4R3A-212ENST00000557382 DSCC1Q9BVC3 393 aa10.67□□□□□ -0.7
PPP4R3A-212ENST00000557382 PANK2Q9BZ23 570 aa10.67□□□□□ -0.7
PPP4R3A-212ENST00000557382 ZBTB3Q9H5J0 574 aa10.67□□□□□ -0.7
PPP4R3A-212ENST00000557382 CEP126Q9P2H0 1117 aa10.67□□□□□ -0.7
PPP4R3A-212ENST00000557382 CHMP3Q9Y3E7 222 aa10.67□□□□□ -0.7
PPP4R3A-212ENST00000557382 NUP98P52948 1817 aa10.67□□□□□ -0.7
PPP4R3A-212ENST00000557382 ROBO1Q9Y6N7 1651 aa10.66□□□□□ -0.7
PPP4R3A-212ENST00000557382 MYH7P12883 1935 aa10.66□□□□□ -0.7
PPP4R3A-212ENST00000557382 COL16A1Q07092 1604 aaPredicted RBP10.66□□□□□ -0.7
PPP4R3A-212ENST00000557382 ERVV-1B6SEH8 477 aa10.66□□□□□ -0.7
PPP4R3A-212ENST00000557382 LETM1O95202 739 aaPredicted RBP10.66□□□□□ -0.7
PPP4R3A-212ENST00000557382 SYT1P21579 422 aa10.66□□□□□ -0.7
PPP4R3A-212ENST00000557382 NASPP49321 788 aaPredicted RBP10.66□□□□□ -0.7
PPP4R3A-212ENST00000557382 CCDC57Q2TAC2 916 aa10.66□□□□□ -0.7
PPP4R3A-212ENST00000557382 ZMYM1Q5SVZ6 1142 aa10.66□□□□□ -0.7
PPP4R3A-212ENST00000557382 ZNF589Q86UQ0 364 aaPredicted RBP10.66□□□□□ -0.7
PPP4R3A-212ENST00000557382 PAG1Q9NWQ8 432 aa10.66□□□□□ -0.7
Retrieved 100 of 20,778 RNA–protein pairs in 16.5 ms