RNA–Protein interactions for RNA: ENST00000557329.1

CHD8-212, Transcript of chromodomain helicase DNA binding protein 8, humanhuman

TSL 2

Gene CHD8, Length 578 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD8-212ENST00000557329 RRAGCQ9HB90 399 aa7.01□□□□□ -1.29
CHD8-212ENST00000557329 BCS1LQ9Y276 419 aa7.01□□□□□ -1.29
CHD8-212ENST00000557329 NEURL1BA8MQ27 555 aa7□□□□□ -1.29
CHD8-212ENST00000557329 HOXB4P17483 251 aaPredicted RBP7□□□□□ -1.29
CHD8-212ENST00000557329 AMPD1P23109 780 aa7□□□□□ -1.29
CHD8-212ENST00000557329 CCER1Q8TC90 406 aaPredicted RBP7□□□□□ -1.29
CHD8-212ENST00000557329 GSX2Q9BZM3 304 aa7□□□□□ -1.29
CHD8-212ENST00000557329 STRN4Q9NRL3 753 aa7□□□□□ -1.29
CHD8-212ENST00000557329 GTF3C5Q9Y5Q8 519 aaPredicted RBP7□□□□□ -1.29
CHD8-212ENST00000557329 USP5P45974 858 aa6.99□□□□□ -1.29
CHD8-212ENST00000557329 NAA30Q147X3 362 aaPredicted RBP6.99□□□□□ -1.29
CHD8-212ENST00000557329 RETREG2Q8NC44 543 aa6.99□□□□□ -1.29
CHD8-212ENST00000557329 RTCBQ9Y3I0 505 aaKnown RBP6.99□□□□□ -1.29
CHD8-212ENST00000557329 SPDYE3A6NKU9 549 aa6.98□□□□□ -1.29
CHD8-212ENST00000557329 BRD1O95696 1058 aa6.98□□□□□ -1.29
CHD8-212ENST00000557329 NPR3P17342 541 aa6.98□□□□□ -1.29
CHD8-212ENST00000557329 FKBP4Q02790 459 aaKnown RBP eCLIP6.98□□□□□ -1.29
CHD8-212ENST00000557329 GRIN2CQ14957 1233 aa6.98□□□□□ -1.29
CHD8-212ENST00000557329 NOM1Q5C9Z4 860 aaKnown RBP6.98□□□□□ -1.29
CHD8-212ENST00000557329 BTBD6Q96KE9 485 aa6.98□□□□□ -1.29
CHD8-212ENST00000557329 PSMG3-AS1Q96PY0 264 aa6.98□□□□□ -1.29
CHD8-212ENST00000557329 NOP53Q9NZM5 478 aaKnown RBP6.98□□□□□ -1.29
CHD8-212ENST00000557329 DCAF1Q9Y4B6 1507 aa6.97□□□□□ -1.29
CHD8-212ENST00000557329 C1QTNF9BB2RNN3 333 aa6.97□□□□□ -1.29
CHD8-212ENST00000557329 TNFRSF10BO14763 440 aa6.97□□□□□ -1.29
CHD8-212ENST00000557329 GNB5O14775 395 aa6.97□□□□□ -1.29
CHD8-212ENST00000557329 ZAP70P43403 619 aa6.97□□□□□ -1.29
CHD8-212ENST00000557329 PCBP4P57723 403 aaKnown RBP6.97□□□□□ -1.29
CHD8-212ENST00000557329 EHHADHQ08426 723 aa6.97□□□□□ -1.29
CHD8-212ENST00000557329 GTF3C2Q8WUA4 911 aaPredicted RBP6.97□□□□□ -1.29
CHD8-212ENST00000557329 BHMTQ93088 406 aa6.97□□□□□ -1.29
CHD8-212ENST00000557329 SLC30A3Q99726 388 aa6.97□□□□□ -1.29
CHD8-212ENST00000557329 SAP130Q9H0E3 1048 aa6.97□□□□□ -1.29
CHD8-212ENST00000557329 SUV39H2Q9H5I1 410 aa6.97□□□□□ -1.29
CHD8-212ENST00000557329 SLAIN2Q9P270 581 aa6.97□□□□□ -1.29
CHD8-212ENST00000557329 OPLAHO14841 1288 aa6.96□□□□□ -1.3
CHD8-212ENST00000557329 XYLBO75191 536 aa6.96□□□□□ -1.3
CHD8-212ENST00000557329 SOX18P35713 384 aa6.96□□□□□ -1.3
CHD8-212ENST00000557329 CYB5RLQ6IPT4 315 aa6.96□□□□□ -1.3
CHD8-212ENST00000557329 PDE12Q6L8Q7 609 aaKnown RBP6.96□□□□□ -1.3
CHD8-212ENST00000557329 NLRP13Q86W25 1043 aa6.96□□□□□ -1.3
CHD8-212ENST00000557329 FCHSD1Q86WN1 690 aa6.96□□□□□ -1.3
CHD8-212ENST00000557329 ETFBKMTQ8IXQ9 262 aa6.96□□□□□ -1.3
CHD8-212ENST00000557329 CMTR1Q8N1G2 835 aaKnown RBP6.96□□□□□ -1.3
CHD8-212ENST00000557329 PRDM6Q9NQX0 595 aa6.96□□□□□ -1.3
CHD8-212ENST00000557329 RARAP10276 462 aa6.95□□□□□ -1.3
CHD8-212ENST00000557329 ADH7P40394 386 aa6.95□□□□□ -1.3
CHD8-212ENST00000557329 CHSY3Q70JA7 882 aa6.95□□□□□ -1.3
CHD8-212ENST00000557329 CD163Q86VB7 1156 aa6.95□□□□□ -1.3
CHD8-212ENST00000557329 RGL4Q8IZJ4 473 aa6.95□□□□□ -1.3
CHD8-212ENST00000557329 CACTIN-AS1Q8N1I8 211 aa6.95□□□□□ -1.3
CHD8-212ENST00000557329 PMEPA1Q969W9 287 aa6.95□□□□□ -1.3
CHD8-212ENST00000557329 MDFIQ99750 246 aa6.95□□□□□ -1.3
CHD8-212ENST00000557329 UBE2OQ9C0C9 1292 aaKnown RBP6.95□□□□□ -1.3
CHD8-212ENST00000557329 RBSNQ9H1K0 784 aa6.95□□□□□ -1.3
CHD8-212ENST00000557329 SEPT3Q9UH03 358 aa6.95□□□□□ -1.3
CHD8-212ENST00000557329 NCAPD3P42695 1498 aa6.95□□□□□ -1.3
CHD8-212ENST00000557329 PSAPP07602 524 aa6.94□□□□□ -1.3
CHD8-212ENST00000557329 HOXD8P13378 290 aaPredicted RBP6.94□□□□□ -1.3
CHD8-212ENST00000557329 NFKB1P19838 968 aa6.94□□□□□ -1.3
CHD8-212ENST00000557329 MZF1P28698 734 aaPredicted RBP6.94□□□□□ -1.3
CHD8-212ENST00000557329 DGKGP49619 791 aa6.94□□□□□ -1.3
CHD8-212ENST00000557329 NRLP54845 237 aa6.94□□□□□ -1.3
CHD8-212ENST00000557329 PLAURQ03405 335 aa6.94□□□□□ -1.3
CHD8-212ENST00000557329 PHLDB3Q6NSJ2 640 aa6.94□□□□□ -1.3
CHD8-212ENST00000557329 KRTAP9-2Q9BYQ4 174 aa6.94□□□□□ -1.3
CHD8-212ENST00000557329 FRRS1LQ9P0K9 344 aa6.94□□□□□ -1.3
CHD8-212ENST00000557329 KLF15Q9UIH9 416 aa6.94□□□□□ -1.3
CHD8-212ENST00000557329 HCN2Q9UL51 889 aa6.94□□□□□ -1.3
CHD8-212ENST00000557329 KRTAP9-1A8MXZ3 250 aaPredicted RBP6.93□□□□□ -1.3
CHD8-212ENST00000557329 UBAP1LF5GYI3 381 aa6.93□□□□□ -1.3
CHD8-212ENST00000557329 NEFLP07196 543 aa6.93□□□□□ -1.3
CHD8-212ENST00000557329 GPLD1P80108 840 aa6.93□□□□□ -1.3
CHD8-212ENST00000557329 AAMPQ13685 434 aa6.93□□□□□ -1.3
CHD8-212ENST00000557329 XKR5Q6UX68 686 aa6.93□□□□□ -1.3
CHD8-212ENST00000557329 TRPM4Q8TD43 1214 aa6.93□□□□□ -1.3
CHD8-212ENST00000557329 CITED4Q96RK1 184 aa6.93□□□□□ -1.3
CHD8-212ENST00000557329 TLR7Q9NYK1 1049 aaKnown RBP6.93□□□□□ -1.3
CHD8-212ENST00000557329 GNEQ9Y223 722 aaKnown RBP6.93□□□□□ -1.3
CHD8-212ENST00000557329 THOC2Q8NI27 1593 aaKnown RBP6.93□□□□□ -1.3
CHD8-212ENST00000557329 ICMTO60725 284 aa6.92□□□□□ -1.3
CHD8-212ENST00000557329 ABL1P00519 1130 aa6.92□□□□□ -1.3
CHD8-212ENST00000557329 CHRNA4P43681 627 aa6.92□□□□□ -1.3
CHD8-212ENST00000557329 EIF1AXP47813 144 aaKnown RBP6.92□□□□□ -1.3
CHD8-212ENST00000557329 KCNA1Q09470 495 aa6.92□□□□□ -1.3
CHD8-212ENST00000557329 TTC39BQ5VTQ0 682 aaPredicted RBP6.92□□□□□ -1.3
CHD8-212ENST00000557329 CAPN12Q6ZSI9 719 aa6.92□□□□□ -1.3
CHD8-212ENST00000557329 DHX32Q7L7V1 743 aaKnown RBP6.92□□□□□ -1.3
CHD8-212ENST00000557329 DCAF11Q8TEB1 546 aa6.92□□□□□ -1.3
CHD8-212ENST00000557329 TTC9Q92623 222 aa6.92□□□□□ -1.3
CHD8-212ENST00000557329 TRAIPQ9BWF2 469 aa6.92□□□□□ -1.3
CHD8-212ENST00000557329 KCNMB2Q9Y691 235 aa6.92□□□□□ -1.3
CHD8-212ENST00000557329 PDS5BQ9NTI5 1447 aa6.92□□□□□ -1.3
CHD8-212ENST00000557329 SASH3O75995 380 aa6.91□□□□□ -1.3
CHD8-212ENST00000557329 ITGB7P26010 798 aa6.91□□□□□ -1.3
CHD8-212ENST00000557329 TXNDC2Q86VQ3 553 aa6.91□□□□□ -1.3
CHD8-212ENST00000557329 GLYCTKQ8IVS8 523 aa6.91□□□□□ -1.3
CHD8-212ENST00000557329 GPR152Q8TDT2 470 aa6.91□□□□□ -1.3
CHD8-212ENST00000557329 DNAJB12Q9NXW2 375 aaKnown RBP6.91□□□□□ -1.3
CHD8-212ENST00000557329 SLC6A14Q9UN76 642 aa6.91□□□□□ -1.3
Retrieved 100 of 20,778 RNA–protein pairs in 253.5 ms