RNA–Protein interactions for RNA: ENST00000557037.5

PSEN1-220, Transcript of presenilin 1, humanhuman

TSL 4

Gene PSEN1, Length 555 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PSEN1-220ENST00000557037 RGL2O15211 777 aa16.93■□□□□ 0.3
PSEN1-220ENST00000557037 NGEFQ8N5V2 710 aa16.93■□□□□ 0.3
PSEN1-220ENST00000557037 GPTP24298 496 aa16.92■□□□□ 0.3
PSEN1-220ENST00000557037 KIAA2012Q0VF49 1180 aa16.92■□□□□ 0.3
PSEN1-220ENST00000557037 DPP8Q6V1X1 898 aaPredicted RBP16.92■□□□□ 0.3
PSEN1-220ENST00000557037 RTFDC1Q9BY42 306 aaPredicted RBP16.92■□□□□ 0.3
PSEN1-220ENST00000557037 SNRPA1P09661 255 aaKnown RBP16.91■□□□□ 0.3
PSEN1-220ENST00000557037 CDCA5Q96FF9 252 aa16.91■□□□□ 0.3
PSEN1-220ENST00000557037 A0A0C4DFX4 3053 aa16.91■□□□□ 0.3
PSEN1-220ENST00000557037 MPNDQ8N594 471 aa16.9■□□□□ 0.3
PSEN1-220ENST00000557037 PSMD14O00487 310 aa16.89■□□□□ 0.29
PSEN1-220ENST00000557037 SUSD4Q5VX71 490 aa16.89■□□□□ 0.29
PSEN1-220ENST00000557037 SULF1Q8IWU6 871 aa16.89■□□□□ 0.29
PSEN1-220ENST00000557037 GAS2L2Q8NHY3 880 aa16.89■□□□□ 0.29
PSEN1-220ENST00000557037 R3HDMLQ9H3Y0 253 aa16.89■□□□□ 0.29
PSEN1-220ENST00000557037 ASTN2O75129 1339 aaPredicted RBP16.89■□□□□ 0.29
PSEN1-220ENST00000557037 SZT2Q5T011 3432 aa16.89■□□□□ 0.29
PSEN1-220ENST00000557037 DIAPH1O60610 1272 aaKnown RBP16.88■□□□□ 0.29
PSEN1-220ENST00000557037 FKTNO75072 461 aa16.88■□□□□ 0.29
PSEN1-220ENST00000557037 MOB2Q70IA6 237 aa16.88■□□□□ 0.29
PSEN1-220ENST00000557037 DPF2Q92785 391 aa16.88■□□□□ 0.29
PSEN1-220ENST00000557037 GGA3Q9NZ52 723 aa16.88■□□□□ 0.29
PSEN1-220ENST00000557037 ABCC4O15439 1325 aa16.88■□□□□ 0.29
PSEN1-220ENST00000557037 UBN2Q6ZU65 1347 aa16.88■□□□□ 0.29
PSEN1-220ENST00000557037 EN2P19622 333 aaPredicted RBP16.87■□□□□ 0.29
PSEN1-220ENST00000557037 MKRN3Q13064 507 aaKnown RBP16.87■□□□□ 0.29
PSEN1-220ENST00000557037 PAPPA2Q9BXP8 1791 aa16.86■□□□□ 0.29
PSEN1-220ENST00000557037 NUP98P52948 1817 aa16.86■□□□□ 0.29
PSEN1-220ENST00000557037 CEMIPQ8WUJ3 1361 aa16.86■□□□□ 0.29
PSEN1-220ENST00000557037 UBE2Q2LH0YL09 131 aa16.85■□□□□ 0.29
PSEN1-220ENST00000557037 NTSR2O95665 410 aa16.85■□□□□ 0.29
PSEN1-220ENST00000557037 KIF4BQ2VIQ3 1234 aa16.85■□□□□ 0.29
PSEN1-220ENST00000557037 INTS3Q68E01 1043 aaKnown RBP16.85■□□□□ 0.29
PSEN1-220ENST00000557037 TTLL7Q6ZT98 887 aa16.85■□□□□ 0.29
PSEN1-220ENST00000557037 SP8Q8IXZ3 490 aa16.85■□□□□ 0.29
PSEN1-220ENST00000557037 NLRP3Q96P20 1036 aa16.85■□□□□ 0.29
PSEN1-220ENST00000557037 DBNDD1Q9H9R9 158 aa16.85■□□□□ 0.29
PSEN1-220ENST00000557037 ERVV-1B6SEH8 477 aa16.84■□□□□ 0.29
PSEN1-220ENST00000557037 NOM1Q5C9Z4 860 aaKnown RBP16.84■□□□□ 0.29
PSEN1-220ENST00000557037 ZBTB3Q9H5J0 574 aa16.84■□□□□ 0.29
PSEN1-220ENST00000557037 KCNQ5Q9NR82 932 aa16.84■□□□□ 0.29
PSEN1-220ENST00000557037 TRIM17Q9Y577 477 aa16.84■□□□□ 0.29
PSEN1-220ENST00000557037 MAP3K15Q6ZN16 1313 aa16.84■□□□□ 0.29
PSEN1-220ENST00000557037 H0YGN5 161 aa16.83■□□□□ 0.28
PSEN1-220ENST00000557037 U2SURPO15042 1029 aaKnown RBP16.83■□□□□ 0.28
PSEN1-220ENST00000557037 TM4SF4P48230 202 aa16.83■□□□□ 0.28
PSEN1-220ENST00000557037 IBTKQ9P2D0 1353 aaPredicted RBP16.83■□□□□ 0.28
PSEN1-220ENST00000557037 HTTP42858 3142 aa16.83■□□□□ 0.28
PSEN1-220ENST00000557037 BBOX1O75936 387 aa16.82■□□□□ 0.28
PSEN1-220ENST00000557037 KIF6Q6ZMV9 814 aa16.82■□□□□ 0.28
PSEN1-220ENST00000557037 SCAF8Q9UPN6 1271 aaKnown RBP16.82■□□□□ 0.28
PSEN1-220ENST00000557037 KNSTRNQ9Y448 316 aa16.82■□□□□ 0.28
PSEN1-220ENST00000557037 RIMBP2O15034 1052 aa16.81■□□□□ 0.28
PSEN1-220ENST00000557037 FKBP1BP68106 108 aa16.81■□□□□ 0.28
PSEN1-220ENST00000557037 ANGEL2Q5VTE6 544 aaKnown RBP16.81■□□□□ 0.28
PSEN1-220ENST00000557037 OTOP1Q7RTM1 612 aa16.81■□□□□ 0.28
PSEN1-220ENST00000557037 ZNF34Q8IZ26 560 aa16.81■□□□□ 0.28
PSEN1-220ENST00000557037 RRP7AQ9Y3A4 280 aaKnown RBP16.81■□□□□ 0.28
PSEN1-220ENST00000557037 RPS12P25398 132 aaKnown RBP16.8■□□□□ 0.28
PSEN1-220ENST00000557037 MCM10Q7L590 875 aa16.8■□□□□ 0.28
PSEN1-220ENST00000557037 OTUD5Q96G74 571 aa16.8■□□□□ 0.28
PSEN1-220ENST00000557037 PHACTR3Q96KR7 559 aa16.8■□□□□ 0.28
PSEN1-220ENST00000557037 RTL9Q8NET4 1388 aa16.79■□□□□ 0.28
PSEN1-220ENST00000557037 SCARF1Q14162 830 aa16.79■□□□□ 0.28
PSEN1-220ENST00000557037 TTLL12Q14166 644 aaPredicted RBP16.79■□□□□ 0.28
PSEN1-220ENST00000557037 DOK7Q18PE1 504 aa16.79■□□□□ 0.28
PSEN1-220ENST00000557037 WASHC4Q2M389 1173 aa16.79■□□□□ 0.28
PSEN1-220ENST00000557037 PRAMEF18Q5VWM3 479 aa16.79■□□□□ 0.28
PSEN1-220ENST00000557037 CHRDL2Q6WN34 429 aa16.79■□□□□ 0.28
PSEN1-220ENST00000557037 PPP1R42Q7Z4L9 355 aa16.79■□□□□ 0.28
PSEN1-220ENST00000557037 DUOX1Q9NRD9 1551 aa16.78■□□□□ 0.28
PSEN1-220ENST00000557037 MYL6BP14649 208 aa16.78■□□□□ 0.28
PSEN1-220ENST00000557037 RBBP6Q7Z6E9 1792 aaKnown RBP16.78■□□□□ 0.28
PSEN1-220ENST00000557037 ECE2O60344 883 aa16.77■□□□□ 0.28
PSEN1-220ENST00000557037 HCLS1P14317 486 aaPredicted RBP16.77■□□□□ 0.28
PSEN1-220ENST00000557037 SREBF2Q12772 1141 aa16.77■□□□□ 0.28
PSEN1-220ENST00000557037 SLC10A5Q5PT55 438 aa16.77■□□□□ 0.28
PSEN1-220ENST00000557037 UTP14AQ9BVJ6 771 aaKnown RBP16.77■□□□□ 0.28
PSEN1-220ENST00000557037 MIS18AQ9NYP9 233 aa16.77■□□□□ 0.28
PSEN1-220ENST00000557037 TAF1P21675 1872 aa16.77■□□□□ 0.27
PSEN1-220ENST00000557037 GRAPQ13588 217 aa16.76■□□□□ 0.27
PSEN1-220ENST00000557037 AMER1Q5JTC6 1135 aaPredicted RBP16.76■□□□□ 0.27
PSEN1-220ENST00000557037 DDX46Q7L014 1031 aaKnown RBP16.76■□□□□ 0.27
PSEN1-220ENST00000557037 GRAPLQ8TC17 118 aaPredicted RBP16.76■□□□□ 0.27
PSEN1-220ENST00000557037 CFHR5Q9BXR6 569 aa16.76■□□□□ 0.27
PSEN1-220ENST00000557037 PTPN22Q9Y2R2 807 aa16.76■□□□□ 0.27
PSEN1-220ENST00000557037 C6orf229H3BNL8 230 aa16.75■□□□□ 0.27
PSEN1-220ENST00000557037 DCTN1Q14203 1278 aa16.75■□□□□ 0.27
PSEN1-220ENST00000557037 ARMC5Q96C12 935 aa16.75■□□□□ 0.27
PSEN1-220ENST00000557037 TMEM106CQ9BVX2 250 aa16.75■□□□□ 0.27
PSEN1-220ENST00000557037 RBM27Q9P2N5 1060 aaKnown RBP16.75■□□□□ 0.27
PSEN1-220ENST00000557037 CENPFP49454 3210 aa16.74■□□□□ 0.27
PSEN1-220ENST00000557037 PARP10Q53GL7 1025 aa16.74■□□□□ 0.27
PSEN1-220ENST00000557037 GIGYF2Q6Y7W6 1299 aaKnown RBP16.74■□□□□ 0.27
PSEN1-220ENST00000557037 NSFL1CQ9UNZ2 370 aaKnown RBP16.74■□□□□ 0.27
PSEN1-220ENST00000557037 RANBP2P49792 3224 aaKnown RBP16.74■□□□□ 0.27
PSEN1-220ENST00000557037 PRKAR2BP31323 418 aa16.73■□□□□ 0.27
PSEN1-220ENST00000557037 CD99L2Q8TCZ2 262 aa16.73■□□□□ 0.27
PSEN1-220ENST00000557037 RTF1Q92541 710 aaKnown RBP16.73■□□□□ 0.27
PSEN1-220ENST00000557037 ZBTB4Q9P1Z0 1013 aaPredicted RBP16.73■□□□□ 0.27
Retrieved 100 of 20,778 RNA–protein pairs in 48.9 ms