RNA–Protein interactions for RNA: ENST00000556674.1

TGFB3-206, Transcript of transforming growth factor beta 3, humanhuman

TSL 3

Gene TGFB3, Length 716 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TGFB3-206ENST00000556674 MIER1Q8N108 512 aa20.65■□□□□ 0.9
TGFB3-206ENST00000556674 CCDC191Q8NCU4 936 aa20.65■□□□□ 0.9
TGFB3-206ENST00000556674 CRAMP1Q96RY5 1269 aa20.65■□□□□ 0.9
TGFB3-206ENST00000556674 METTL22Q9BUU2 404 aaPredicted RBP20.65■□□□□ 0.9
TGFB3-206ENST00000556674 HSPA8P11142 646 aaKnown RBP20.64■□□□□ 0.89
TGFB3-206ENST00000556674 EAPPQ56P03 285 aaPredicted RBP20.64■□□□□ 0.89
TGFB3-206ENST00000556674 CC2D2BQ6DHV5 1058 aa20.64■□□□□ 0.89
TGFB3-206ENST00000556674 ATP5J2-PTCD1G3V325 749 aa20.63■□□□□ 0.89
TGFB3-206ENST00000556674 FLIIQ13045 1269 aa20.63■□□□□ 0.89
TGFB3-206ENST00000556674 CCDC93Q567U6 631 aa20.63■□□□□ 0.89
TGFB3-206ENST00000556674 ZNF428Q96B54 188 aa20.63■□□□□ 0.89
TGFB3-206ENST00000556674 PI4KAP2A4QPH2 592 aa20.62■□□□□ 0.89
TGFB3-206ENST00000556674 RTKN2Q8IZC4 609 aa20.62■□□□□ 0.89
TGFB3-206ENST00000556674 PI4KAP1Q8N8J0 262 aa20.62■□□□□ 0.89
TGFB3-206ENST00000556674 ZBTB38Q8NAP3 1195 aaPredicted RBP20.62■□□□□ 0.89
TGFB3-206ENST00000556674 C7orf43Q8WVR3 580 aa20.62■□□□□ 0.89
TGFB3-206ENST00000556674 MYD88Q99836 296 aa20.62■□□□□ 0.89
TGFB3-206ENST00000556674 CWC25Q9NXE8 425 aaPredicted RBP20.62■□□□□ 0.89
TGFB3-206ENST00000556674 CLEC11AQ9Y240 323 aa20.62■□□□□ 0.89
TGFB3-206ENST00000556674 MAP3K2Q9Y2U5 619 aa20.62■□□□□ 0.89
TGFB3-206ENST00000556674 ADAMTSL1Q8N6G6 1762 aa20.62■□□□□ 0.89
TGFB3-206ENST00000556674 ZNF541Q9H0D2 1346 aa20.61■□□□□ 0.89
TGFB3-206ENST00000556674 RASSF10A6NK89 507 aa20.61■□□□□ 0.89
TGFB3-206ENST00000556674 SLFN5Q08AF3 891 aa20.61■□□□□ 0.89
TGFB3-206ENST00000556674 DEFB115Q30KQ5 88 aa20.61■□□□□ 0.89
TGFB3-206ENST00000556674 TMX4Q9H1E5 349 aaPredicted RBP20.61■□□□□ 0.89
TGFB3-206ENST00000556674 TCERG1O14776 1098 aaKnown RBP20.6■□□□□ 0.89
TGFB3-206ENST00000556674 FKBP5Q13451 457 aaPredicted RBP20.6■□□□□ 0.89
TGFB3-206ENST00000556674 HACL1Q9UJ83 578 aa20.6■□□□□ 0.89
TGFB3-206ENST00000556674 WDR33Q9C0J8 1336 aaKnown RBP20.59■□□□□ 0.89
TGFB3-206ENST00000556674 PCCAP05165 728 aaPredicted RBP20.59■□□□□ 0.89
TGFB3-206ENST00000556674 HCLS1P14317 486 aaPredicted RBP20.59■□□□□ 0.89
TGFB3-206ENST00000556674 EPHX2P34913 555 aa20.59■□□□□ 0.89
TGFB3-206ENST00000556674 DDX46Q7L014 1031 aaKnown RBP20.59■□□□□ 0.89
TGFB3-206ENST00000556674 FAM89AQ96GI7 184 aa20.59■□□□□ 0.89
TGFB3-206ENST00000556674 LAMB2P55268 1798 aa20.59■□□□□ 0.89
TGFB3-206ENST00000556674 CT47B1P0C2W7 299 aaPredicted RBP20.58■□□□□ 0.89
TGFB3-206ENST00000556674 MAP1SQ66K74 1059 aaPredicted RBP20.58■□□□□ 0.89
TGFB3-206ENST00000556674 G2E3Q7L622 706 aa20.58■□□□□ 0.89
TGFB3-206ENST00000556674 TMC4Q7Z404 712 aa20.58■□□□□ 0.89
TGFB3-206ENST00000556674 CNTROBQ8N137 903 aa20.58■□□□□ 0.89
TGFB3-206ENST00000556674 IRS4O14654 1257 aaPredicted RBP20.57■□□□□ 0.88
TGFB3-206ENST00000556674 BBOX1O75936 387 aa20.57■□□□□ 0.88
TGFB3-206ENST00000556674 MAP2K1Q02750 393 aaPredicted RBP20.57■□□□□ 0.88
TGFB3-206ENST00000556674 SF3B3Q15393 1217 aaKnown RBP20.57■□□□□ 0.88
TGFB3-206ENST00000556674 DDX60Q8IY21 1712 aaKnown RBP20.57■□□□□ 0.88
TGFB3-206ENST00000556674 DNAAF4Q8WXU2 420 aa20.57■□□□□ 0.88
TGFB3-206ENST00000556674 ZNF277Q9NRM2 450 aaPredicted RBP20.57■□□□□ 0.88
TGFB3-206ENST00000556674 CDHR2Q9BYE9 1310 aa20.56■□□□□ 0.88
TGFB3-206ENST00000556674 PPEF1O14829 653 aaPredicted RBP20.56■□□□□ 0.88
TGFB3-206ENST00000556674 FKBP4Q02790 459 aaKnown RBP eCLIP20.56■□□□□ 0.88
TGFB3-206ENST00000556674 C3orf67Q6ZVT6 689 aa20.56■□□□□ 0.88
TGFB3-206ENST00000556674 TRMT2AQ8IZ69 625 aaKnown RBP20.56■□□□□ 0.88
TGFB3-206ENST00000556674 ABT1Q9ULW3 272 aaKnown RBP20.56■□□□□ 0.88
TGFB3-206ENST00000556674 CCDC85CA6NKD9 419 aa20.55■□□□□ 0.88
TGFB3-206ENST00000556674 MLLT1Q03111 559 aaPredicted RBP20.55■□□□□ 0.88
TGFB3-206ENST00000556674 PNMA8AQ86V59 439 aaPredicted RBP20.55■□□□□ 0.88
TGFB3-206ENST00000556674 SYNE4Q8N205 404 aa20.55■□□□□ 0.88
TGFB3-206ENST00000556674 LINS1Q8NG48 757 aa20.55■□□□□ 0.88
TGFB3-206ENST00000556674 PSMD1Q99460 953 aa20.55■□□□□ 0.88
TGFB3-206ENST00000556674 ABCC4O15439 1325 aa20.54■□□□□ 0.88
TGFB3-206ENST00000556674 NEURL1BA8MQ27 555 aa20.54■□□□□ 0.88
TGFB3-206ENST00000556674 PDE8AO60658 829 aa20.54■□□□□ 0.88
TGFB3-206ENST00000556674 IGKV5-2P06315 115 aa20.54■□□□□ 0.88
TGFB3-206ENST00000556674 GRAPQ13588 217 aa20.54■□□□□ 0.88
TGFB3-206ENST00000556674 OLFM4Q6UX06 510 aa20.54■□□□□ 0.88
TGFB3-206ENST00000556674 GRAPLQ8TC17 118 aaPredicted RBP20.54■□□□□ 0.88
TGFB3-206ENST00000556674 ATP6V0A2Q9Y487 856 aa20.54■□□□□ 0.88
TGFB3-206ENST00000556674 RGS19P49795 217 aa20.52■□□□□ 0.88
TGFB3-206ENST00000556674 ALDH1L2Q3SY69 923 aa20.52■□□□□ 0.88
TGFB3-206ENST00000556674 CCDC152Q4G0S7 254 aa20.52■□□□□ 0.88
TGFB3-206ENST00000556674 THSD7BQ9C0I4 1608 aa20.52■□□□□ 0.88
TGFB3-206ENST00000556674 SNED1Q8TER0 1413 aa20.52■□□□□ 0.87
TGFB3-206ENST00000556674 FZD9O00144 591 aa20.51■□□□□ 0.87
TGFB3-206ENST00000556674 RTL5Q5HYW3 569 aaPredicted RBP20.51■□□□□ 0.87
TGFB3-206ENST00000556674 SP8Q8IXZ3 490 aa20.51■□□□□ 0.87
TGFB3-206ENST00000556674 CDCA7LQ96GN5 454 aa20.51■□□□□ 0.87
TGFB3-206ENST00000556674 VPS33BQ9H267 617 aa20.51■□□□□ 0.87
TGFB3-206ENST00000556674 PTPRCP08575 1304 aa20.51■□□□□ 0.87
TGFB3-206ENST00000556674 IARSP41252 1262 aaKnown RBP20.5■□□□□ 0.87
TGFB3-206ENST00000556674 GCKRQ14397 625 aa20.5■□□□□ 0.87
TGFB3-206ENST00000556674 CWF19L2Q2TBE0 894 aaKnown RBP20.5■□□□□ 0.87
TGFB3-206ENST00000556674 SUPT20HQ8NEM7 779 aa20.5■□□□□ 0.87
TGFB3-206ENST00000556674 FMR1Q06787 632 aaKnown RBP eCLIP20.49■□□□□ 0.87
TGFB3-206ENST00000556674 PAXIP1Q6ZW49 1069 aaPredicted RBP20.49■□□□□ 0.87
TGFB3-206ENST00000556674 GPC2Q8N158 579 aa20.49■□□□□ 0.87
TGFB3-206ENST00000556674 CAPNS2Q96L46 248 aa20.49■□□□□ 0.87
TGFB3-206ENST00000556674 PCDH10Q9P2E7 1040 aa20.49■□□□□ 0.87
TGFB3-206ENST00000556674 H7C1W4 665 aa20.48■□□□□ 0.87
TGFB3-206ENST00000556674 GRM1Q13255 1194 aa20.48■□□□□ 0.87
TGFB3-206ENST00000556674 MRPL50Q8N5N7 158 aaKnown RBP20.48■□□□□ 0.87
TGFB3-206ENST00000556674 BEGAINQ9BUH8 593 aa20.48■□□□□ 0.87
TGFB3-206ENST00000556674 HNRNPUQ00839 825 aaKnown RBP eCLIP20.47■□□□□ 0.87
TGFB3-206ENST00000556674 BEND3Q5T5X7 828 aa20.47■□□□□ 0.87
TGFB3-206ENST00000556674 CYP4F22Q6NT55 531 aa20.47■□□□□ 0.87
TGFB3-206ENST00000556674 JDP2Q8WYK2 163 aa20.47■□□□□ 0.87
TGFB3-206ENST00000556674 ALDH1L1O75891 902 aa20.46■□□□□ 0.87
TGFB3-206ENST00000556674 CTSWP56202 376 aa20.46■□□□□ 0.87
TGFB3-206ENST00000556674 RPS8P62241 208 aaKnown RBP20.46■□□□□ 0.87
TGFB3-206ENST00000556674 DPP8Q6V1X1 898 aaPredicted RBP20.46■□□□□ 0.87
Retrieved 100 of 20,778 RNA–protein pairs in 17.3 ms