RNA–Protein interactions for RNA: ENST00000556648.1

TMEM260-211, Transcript of transmembrane protein 260, humanhuman

TSL 2

Gene TMEM260, Length 2,013 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM260-211ENST00000556648 CCDC129Q6ZRS4 1044 aa12.2□□□□□ -0.46
TMEM260-211ENST00000556648 DDX46Q7L014 1031 aaKnown RBP12.2□□□□□ -0.46
TMEM260-211ENST00000556648 VSIG10Q8N0Z9 540 aa12.2□□□□□ -0.46
TMEM260-211ENST00000556648 FAM89AQ96GI7 184 aa12.2□□□□□ -0.46
TMEM260-211ENST00000556648 JCADQ9P266 1359 aa12.19□□□□□ -0.46
TMEM260-211ENST00000556648 SLC27A2O14975 620 aa12.19□□□□□ -0.46
TMEM260-211ENST00000556648 BRD1O95696 1058 aa12.19□□□□□ -0.46
TMEM260-211ENST00000556648 CYP19A1P11511 503 aaPredicted RBP12.19□□□□□ -0.46
TMEM260-211ENST00000556648 GPTP24298 496 aa12.19□□□□□ -0.46
TMEM260-211ENST00000556648 TIMM10P62072 90 aa12.19□□□□□ -0.46
TMEM260-211ENST00000556648 MAP4K1Q92918 833 aa12.19□□□□□ -0.46
TMEM260-211ENST00000556648 INTS4Q96HW7 963 aaKnown RBP12.19□□□□□ -0.46
TMEM260-211ENST00000556648 HAUS7Q99871 368 aa12.19□□□□□ -0.46
TMEM260-211ENST00000556648 PANK2Q9BZ23 570 aa12.19□□□□□ -0.46
TMEM260-211ENST00000556648 LMBRD1Q9NUN5 540 aa12.19□□□□□ -0.46
TMEM260-211ENST00000556648 ZBTB1Q9Y2K1 713 aa12.19□□□□□ -0.46
TMEM260-211ENST00000556648 KAT6BQ8WYB5 2073 aa12.19□□□□□ -0.46
TMEM260-211ENST00000556648 ANKRD36CQ5JPF3 1778 aa12.18□□□□□ -0.46
TMEM260-211ENST00000556648 MAP3K15Q6ZN16 1313 aa12.18□□□□□ -0.46
TMEM260-211ENST00000556648 EYA2O00167 538 aa12.18□□□□□ -0.46
TMEM260-211ENST00000556648 EXOC5O00471 708 aa12.18□□□□□ -0.46
TMEM260-211ENST00000556648 XRCC6P12956 609 aaKnown RBP eCLIP12.18□□□□□ -0.46
TMEM260-211ENST00000556648 PRIM1P49642 420 aaKnown RBP12.18□□□□□ -0.46
TMEM260-211ENST00000556648 GAS2L3Q86XJ1 694 aa12.18□□□□□ -0.46
TMEM260-211ENST00000556648 NEUROD6Q96NK8 337 aa12.18□□□□□ -0.46
TMEM260-211ENST00000556648 SEC62Q99442 399 aaKnown RBP12.18□□□□□ -0.46
TMEM260-211ENST00000556648 GOLGA6L22H0YM25 854 aa12.18□□□□□ -0.46
TMEM260-211ENST00000556648 KCNJ4P48050 445 aa12.18□□□□□ -0.46
TMEM260-211ENST00000556648 ST3GAL1Q11201 340 aa12.18□□□□□ -0.46
TMEM260-211ENST00000556648 L1TD1Q5T7N2 865 aaKnown RBP12.18□□□□□ -0.46
TMEM260-211ENST00000556648 ZSWIM6Q9HCJ5 1215 aa12.18□□□□□ -0.46
TMEM260-211ENST00000556648 PDRG1Q9NUG6 133 aa12.18□□□□□ -0.46
TMEM260-211ENST00000556648 STARD3NLO95772 234 aa12.17□□□□□ -0.46
TMEM260-211ENST00000556648 PTMSP20962 102 aa12.17□□□□□ -0.46
TMEM260-211ENST00000556648 IL15P40933 162 aaPredicted RBP12.17□□□□□ -0.46
TMEM260-211ENST00000556648 SKOR2Q2VWA4 1001 aaPredicted RBP12.17□□□□□ -0.46
TMEM260-211ENST00000556648 TCEANC2Q96MN5 208 aa12.17□□□□□ -0.46
TMEM260-211ENST00000556648 TEX13AQ9BXU3 409 aaPredicted RBP12.17□□□□□ -0.46
TMEM260-211ENST00000556648 LIMCH1Q9UPQ0 1083 aa12.17□□□□□ -0.46
TMEM260-211ENST00000556648 SLIT2O94813 1529 aa12.17□□□□□ -0.46
TMEM260-211ENST00000556648 A0A0G2JS52 829 aa12.16□□□□□ -0.46
TMEM260-211ENST00000556648 PRPF40AO75400 957 aaKnown RBP12.16□□□□□ -0.46
TMEM260-211ENST00000556648 TAF5LO75529 589 aa12.16□□□□□ -0.46
TMEM260-211ENST00000556648 PCCAP05165 728 aaPredicted RBP12.16□□□□□ -0.46
TMEM260-211ENST00000556648 ADORA1P30542 326 aa12.16□□□□□ -0.46
TMEM260-211ENST00000556648 GIGYF2Q6Y7W6 1299 aaKnown RBP12.16□□□□□ -0.46
TMEM260-211ENST00000556648 DDX49Q9Y6V7 483 aaKnown RBP12.16□□□□□ -0.46
TMEM260-211ENST00000556648 SPATA31A1Q5TZJ5 1347 aa12.16□□□□□ -0.46
TMEM260-211ENST00000556648 NUTM2BA6NNL0 878 aaPredicted RBP12.16□□□□□ -0.46
TMEM260-211ENST00000556648 NUTM2EB1AL46 878 aaPredicted RBP12.16□□□□□ -0.46
TMEM260-211ENST00000556648 GOLIM4O00461 696 aa12.16□□□□□ -0.46
TMEM260-211ENST00000556648 TRIM28Q13263 835 aaKnown RBP12.16□□□□□ -0.46
TMEM260-211ENST00000556648 KLHL40Q2TBA0 621 aa12.16□□□□□ -0.46
TMEM260-211ENST00000556648 FOXD4L6Q3SYB3 417 aaPredicted RBP12.16□□□□□ -0.46
TMEM260-211ENST00000556648 FOXD4L3Q6VB84 417 aaPredicted RBP12.16□□□□□ -0.46
TMEM260-211ENST00000556648 NLRP10Q86W26 655 aa12.16□□□□□ -0.46
TMEM260-211ENST00000556648 NUTM2AQ8IVF1 878 aaPredicted RBP12.16□□□□□ -0.46
TMEM260-211ENST00000556648 GPT2Q8TD30 523 aa12.16□□□□□ -0.46
TMEM260-211ENST00000556648 ACSBG1Q96GR2 724 aa12.16□□□□□ -0.46
TMEM260-211ENST00000556648 TM6SF1Q9BZW5 370 aa12.16□□□□□ -0.46
TMEM260-211ENST00000556648 RTN4Q9NQC3 1192 aaKnown RBP12.16□□□□□ -0.46
TMEM260-211ENST00000556648 RIC1Q4ADV7 1423 aa12.16□□□□□ -0.46
TMEM260-211ENST00000556648 NUP98P52948 1817 aa12.15□□□□□ -0.46
TMEM260-211ENST00000556648 A0A1B0GUL7 405 aa12.15□□□□□ -0.46
TMEM260-211ENST00000556648 CIAO1O76071 339 aa12.15□□□□□ -0.46
TMEM260-211ENST00000556648 VPS53Q5VIR6 699 aa12.15□□□□□ -0.46
TMEM260-211ENST00000556648 CCDC83Q8IWF9 413 aa12.15□□□□□ -0.46
TMEM260-211ENST00000556648 ZBTB38Q8NAP3 1195 aaPredicted RBP12.15□□□□□ -0.46
TMEM260-211ENST00000556648 RBM27Q9P2N5 1060 aaKnown RBP12.15□□□□□ -0.46
TMEM260-211ENST00000556648 NSFL1CQ9UNZ2 370 aaKnown RBP12.15□□□□□ -0.46
TMEM260-211ENST00000556648 CYP46A1Q9Y6A2 500 aa12.15□□□□□ -0.46
TMEM260-211ENST00000556648 RFX7Q2KHR2 1363 aa12.15□□□□□ -0.46
TMEM260-211ENST00000556648 ZKSCAN1P17029 563 aaPredicted RBP12.15□□□□□ -0.47
TMEM260-211ENST00000556648 NCLP19338 710 aaKnown RBP12.15□□□□□ -0.47
TMEM260-211ENST00000556648 CCDC57Q2TAC2 916 aa12.15□□□□□ -0.47
TMEM260-211ENST00000556648 GPR108Q9NPR9 543 aa12.15□□□□□ -0.47
TMEM260-211ENST00000556648 PAG1Q9NWQ8 432 aa12.15□□□□□ -0.47
TMEM260-211ENST00000556648 TBC1D2BQ9UPU7 963 aa12.15□□□□□ -0.47
TMEM260-211ENST00000556648 PALLDQ8WX93 1383 aa12.14□□□□□ -0.47
TMEM260-211ENST00000556648 ME3Q16798 604 aa12.14□□□□□ -0.47
TMEM260-211ENST00000556648 CAVIN1Q6NZI2 390 aaKnown RBP12.14□□□□□ -0.47
TMEM260-211ENST00000556648 NECAB1Q8N987 351 aa12.14□□□□□ -0.47
TMEM260-211ENST00000556648 MARCH10Q8NA82 808 aaPredicted RBP12.14□□□□□ -0.47
TMEM260-211ENST00000556648 KBTBD3Q8NAB2 608 aa12.14□□□□□ -0.47
TMEM260-211ENST00000556648 PLA2G12BQ9BX93 195 aa12.14□□□□□ -0.47
TMEM260-211ENST00000556648 TPCN1Q9ULQ1 816 aa12.14□□□□□ -0.47
TMEM260-211ENST00000556648 UBN2Q6ZU65 1347 aa12.14□□□□□ -0.47
TMEM260-211ENST00000556648 CSF1RP07333 972 aa12.13□□□□□ -0.47
TMEM260-211ENST00000556648 PIP4K2BP78356 416 aa12.13□□□□□ -0.47
TMEM260-211ENST00000556648 GREM2Q9H772 168 aa12.13□□□□□ -0.47
TMEM260-211ENST00000556648 GRPEL1Q9HAV7 217 aa12.13□□□□□ -0.47
TMEM260-211ENST00000556648 MYH3P11055 1940 aa12.13□□□□□ -0.47
TMEM260-211ENST00000556648 A0A0G2JLW4 131 aa12.13□□□□□ -0.47
TMEM260-211ENST00000556648 DDB1Q16531 1140 aa12.13□□□□□ -0.47
TMEM260-211ENST00000556648 MCMDC2Q4G0Z9 681 aa12.13□□□□□ -0.47
TMEM260-211ENST00000556648 USPL1Q5W0Q7 1092 aa12.13□□□□□ -0.47
TMEM260-211ENST00000556648 DZIP3Q86Y13 1208 aaKnown RBP12.13□□□□□ -0.47
TMEM260-211ENST00000556648 GDPD2Q9HCC8 539 aa12.13□□□□□ -0.47
TMEM260-211ENST00000556648 CEP126Q9P2H0 1117 aa12.13□□□□□ -0.47
TMEM260-211ENST00000556648 SH3TC1Q8TE82 1336 aa12.12□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 19.1 ms