RNA–Protein interactions for RNA: ENST00000556636.5

GABRB3-211, Transcript of gamma-aminobutyric acid type A receptor beta3 subunit, humanhuman

TSL 2

Gene GABRB3, Length 501 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GABRB3-211ENST00000556636 SEC31BQ9NQW1 1179 aa13.66□□□□□ -0.22
GABRB3-211ENST00000556636 ZNF277Q9NRM2 450 aaPredicted RBP13.66□□□□□ -0.22
GABRB3-211ENST00000556636 ZC3H4Q9UPT8 1303 aaKnown RBP13.65□□□□□ -0.22
GABRB3-211ENST00000556636 FER1L6Q2WGJ9 1857 aa13.65□□□□□ -0.22
GABRB3-211ENST00000556636 HSP90B1P14625 803 aaKnown RBP13.65□□□□□ -0.22
GABRB3-211ENST00000556636 BRPF1P55201 1214 aaPredicted RBP13.65□□□□□ -0.22
GABRB3-211ENST00000556636 GRIPAP1Q4V328 841 aa13.65□□□□□ -0.22
GABRB3-211ENST00000556636 UBE3BQ7Z3V4 1068 aa13.65□□□□□ -0.22
GABRB3-211ENST00000556636 TTLL11Q8NHH1 800 aa13.65□□□□□ -0.22
GABRB3-211ENST00000556636 PLA2G12BQ9BX93 195 aa13.65□□□□□ -0.22
GABRB3-211ENST00000556636 BCL2L13Q9BXK5 485 aa13.65□□□□□ -0.22
GABRB3-211ENST00000556636 CACNA1FO60840 1977 aa13.64□□□□□ -0.23
GABRB3-211ENST00000556636 GLTPD2A6NH11 291 aa13.64□□□□□ -0.23
GABRB3-211ENST00000556636 KIF3CO14782 793 aa13.64□□□□□ -0.23
GABRB3-211ENST00000556636 RARSP54136 660 aaKnown RBP13.64□□□□□ -0.23
GABRB3-211ENST00000556636 RPS8P62241 208 aaKnown RBP13.64□□□□□ -0.23
GABRB3-211ENST00000556636 RTFDC1Q9BY42 306 aaPredicted RBP13.64□□□□□ -0.23
GABRB3-211ENST00000556636 DDX60Q8IY21 1712 aaKnown RBP13.64□□□□□ -0.23
GABRB3-211ENST00000556636 COL4A1P02462 1669 aa13.63□□□□□ -0.23
GABRB3-211ENST00000556636 CSF1RP07333 972 aa13.63□□□□□ -0.23
GABRB3-211ENST00000556636 IARSP41252 1262 aaKnown RBP13.63□□□□□ -0.23
GABRB3-211ENST00000556636 CTSWP56202 376 aa13.63□□□□□ -0.23
GABRB3-211ENST00000556636 CCDC152Q4G0S7 254 aa13.63□□□□□ -0.23
GABRB3-211ENST00000556636 TMC4Q7Z404 712 aa13.63□□□□□ -0.23
GABRB3-211ENST00000556636 CCDC85AQ96PX6 553 aaPredicted RBP13.63□□□□□ -0.23
GABRB3-211ENST00000556636 NMRK2Q9NPI5 230 aa13.63□□□□□ -0.23
GABRB3-211ENST00000556636 PTPRCP08575 1304 aa13.63□□□□□ -0.23
GABRB3-211ENST00000556636 POTECB2RU33 542 aa13.62□□□□□ -0.23
GABRB3-211ENST00000556636 ALDH1L1O75891 902 aa13.62□□□□□ -0.23
GABRB3-211ENST00000556636 FOXO4P98177 505 aa13.62□□□□□ -0.23
GABRB3-211ENST00000556636 SLC4A10Q6U841 1118 aa13.62□□□□□ -0.23
GABRB3-211ENST00000556636 MPNDQ8N594 471 aa13.62□□□□□ -0.23
GABRB3-211ENST00000556636 GREM2Q9H772 168 aa13.62□□□□□ -0.23
GABRB3-211ENST00000556636 LAMB2P55268 1798 aa13.62□□□□□ -0.23
GABRB3-211ENST00000556636 FZD9O00144 591 aa13.61□□□□□ -0.23
GABRB3-211ENST00000556636 GRM8O00222 908 aa13.61□□□□□ -0.23
GABRB3-211ENST00000556636 EPHA10Q5JZY3 1008 aa13.61□□□□□ -0.23
GABRB3-211ENST00000556636 SRCIN1Q9C0H9 1055 aa13.61□□□□□ -0.23
GABRB3-211ENST00000556636 RRAGCQ9HB90 399 aa13.61□□□□□ -0.23
GABRB3-211ENST00000556636 SMC4Q9NTJ3 1288 aa13.61□□□□□ -0.23
GABRB3-211ENST00000556636 NOB1Q9ULX3 412 aaKnown RBP13.61□□□□□ -0.23
GABRB3-211ENST00000556636 CACNA1SQ13698 1873 aa13.61□□□□□ -0.23
GABRB3-211ENST00000556636 DDNO94850 711 aaPredicted RBP13.6□□□□□ -0.23
GABRB3-211ENST00000556636 TAF1P21675 1872 aa13.6□□□□□ -0.23
GABRB3-211ENST00000556636 GPSM2P81274 684 aa13.6□□□□□ -0.23
GABRB3-211ENST00000556636 DPY19L2Q6NUT2 758 aa13.6□□□□□ -0.23
GABRB3-211ENST00000556636 DPP8Q6V1X1 898 aaPredicted RBP13.6□□□□□ -0.23
GABRB3-211ENST00000556636 KAZALD1Q96I82 304 aa13.6□□□□□ -0.23
GABRB3-211ENST00000556636 VPS33BQ9H267 617 aa13.6□□□□□ -0.23
GABRB3-211ENST00000556636 POLLQ9UGP5 575 aa13.6□□□□□ -0.23
GABRB3-211ENST00000556636 UTYO14607 1347 aa13.6□□□□□ -0.23
GABRB3-211ENST00000556636 ZBED9Q6R2W3 1325 aa13.6□□□□□ -0.23
GABRB3-211ENST00000556636 KDM2BQ8NHM5 1336 aa13.6□□□□□ -0.23
GABRB3-211ENST00000556636 COL4A5P29400 1685 aa13.59□□□□□ -0.23
GABRB3-211ENST00000556636 RTL9Q8NET4 1388 aa13.59□□□□□ -0.23
GABRB3-211ENST00000556636 NBPF7P0C2Y1 421 aaPredicted RBP13.59□□□□□ -0.23
GABRB3-211ENST00000556636 C1QTNF8P60827 252 aa13.59□□□□□ -0.23
GABRB3-211ENST00000556636 TMX4Q9H1E5 349 aaPredicted RBP13.59□□□□□ -0.23
GABRB3-211ENST00000556636 NSFL1CQ9UNZ2 370 aaKnown RBP13.59□□□□□ -0.23
GABRB3-211ENST00000556636 AOC3Q16853 763 aa13.58□□□□□ -0.24
GABRB3-211ENST00000556636 ANKRD18AQ8IVF6 992 aa13.58□□□□□ -0.24
GABRB3-211ENST00000556636 LARGE2Q8N3Y3 721 aa13.58□□□□□ -0.24
GABRB3-211ENST00000556636 USP44Q9H0E7 712 aa13.58□□□□□ -0.24
GABRB3-211ENST00000556636 BSDC1Q9NW68 430 aaPredicted RBP13.58□□□□□ -0.24
GABRB3-211ENST00000556636 PODXL2Q9NZ53 605 aa13.58□□□□□ -0.24
GABRB3-211ENST00000556636 C9orf78Q9NZ63 289 aaPredicted RBP13.58□□□□□ -0.24
GABRB3-211ENST00000556636 CCDC88AQ3V6T2 1871 aa13.58□□□□□ -0.24
GABRB3-211ENST00000556636 ZNF541Q9H0D2 1346 aa13.58□□□□□ -0.24
GABRB3-211ENST00000556636 WTIPA6NIX2 430 aaPredicted RBP13.57□□□□□ -0.24
GABRB3-211ENST00000556636 PPIP5K2O43314 1243 aa13.57□□□□□ -0.24
GABRB3-211ENST00000556636 BCAR3O75815 825 aa13.57□□□□□ -0.24
GABRB3-211ENST00000556636 ITGA6P23229 1130 aa13.57□□□□□ -0.24
GABRB3-211ENST00000556636 KIAA2012Q0VF49 1180 aa13.57□□□□□ -0.24
GABRB3-211ENST00000556636 FAM161AQ3B820 660 aa13.57□□□□□ -0.24
GABRB3-211ENST00000556636 SUPT20HQ8NEM7 779 aa13.57□□□□□ -0.24
GABRB3-211ENST00000556636 TBC1D16Q8TBP0 767 aa13.57□□□□□ -0.24
GABRB3-211ENST00000556636 JDP2Q8WYK2 163 aa13.57□□□□□ -0.24
GABRB3-211ENST00000556636 ARHGAP45Q92619 1136 aa13.57□□□□□ -0.24
GABRB3-211ENST00000556636 SUCLG2Q96I99 432 aa13.57□□□□□ -0.24
GABRB3-211ENST00000556636 CDC5LQ99459 802 aaKnown RBP13.57□□□□□ -0.24
GABRB3-211ENST00000556636 VEGFAP15692 232 aaPredicted RBP13.56□□□□□ -0.24
GABRB3-211ENST00000556636 LMBR1LQ6UX01 489 aa13.56□□□□□ -0.24
GABRB3-211ENST00000556636 MINPP1Q9UNW1 487 aa13.56□□□□□ -0.24
GABRB3-211ENST00000556636 DICER1Q9UPY3 1922 aaKnown RBP13.55□□□□□ -0.24
GABRB3-211ENST00000556636 TOMM70O94826 608 aa13.55□□□□□ -0.24
GABRB3-211ENST00000556636 L3MBTL3Q96JM7 780 aaPredicted RBP13.55□□□□□ -0.24
GABRB3-211ENST00000556636 GPR101Q96P66 508 aaPredicted RBP13.55□□□□□ -0.24
GABRB3-211ENST00000556636 API5Q9BZZ5 524 aaKnown RBP13.55□□□□□ -0.24
GABRB3-211ENST00000556636 DUOX1Q9NRD9 1551 aa13.54□□□□□ -0.24
GABRB3-211ENST00000556636 YDJCA8MPS7 323 aa13.54□□□□□ -0.24
GABRB3-211ENST00000556636 C6orf229H3BNL8 230 aa13.54□□□□□ -0.24
GABRB3-211ENST00000556636 CXCL9Q07325 125 aa13.54□□□□□ -0.24
GABRB3-211ENST00000556636 WASHC4Q2M389 1173 aa13.54□□□□□ -0.24
GABRB3-211ENST00000556636 RABL6Q3YEC7 729 aaPredicted RBP13.54□□□□□ -0.24
GABRB3-211ENST00000556636 NIM1KQ8IY84 436 aa13.54□□□□□ -0.24
GABRB3-211ENST00000556636 ZNRF3Q9ULT6 936 aa13.54□□□□□ -0.24
GABRB3-211ENST00000556636 TNNQ9UQP3 1299 aa13.54□□□□□ -0.24
GABRB3-211ENST00000556636 ANKRD18BA2A2Z9 1011 aa13.53□□□□□ -0.24
GABRB3-211ENST00000556636 RIMBP2O15034 1052 aa13.53□□□□□ -0.24
GABRB3-211ENST00000556636 CCT4P50991 539 aaKnown RBP13.53□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 35.6 ms