RNA–Protein interactions for RNA: ENST00000556343.1

ACTN1-218, Transcript of actinin alpha 1, humanhuman

TSL 3

Gene ACTN1, Length 274 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ACTN1-218ENST00000556343 NOP58Q9Y2X3 529 aaKnown RBP11.4□□□□□ -0.58
ACTN1-218ENST00000556343 N4BP2Q86UW6 1770 aaPredicted RBP11.4□□□□□ -0.58
ACTN1-218ENST00000556343 NUP98P52948 1817 aa11.39□□□□□ -0.59
ACTN1-218ENST00000556343 PDE6BP35913 854 aa11.39□□□□□ -0.59
ACTN1-218ENST00000556343 IGHMBP2P38935 993 aaKnown RBP11.39□□□□□ -0.59
ACTN1-218ENST00000556343 PRR5LQ6MZQ0 368 aa11.39□□□□□ -0.59
ACTN1-218ENST00000556343 UBR3Q6ZT12 1888 aa11.39□□□□□ -0.59
ACTN1-218ENST00000556343 DDX46Q7L014 1031 aaKnown RBP11.39□□□□□ -0.59
ACTN1-218ENST00000556343 SYNE4Q8N205 404 aa11.39□□□□□ -0.59
ACTN1-218ENST00000556343 LRRCC1Q9C099 1032 aa11.39□□□□□ -0.59
ACTN1-218ENST00000556343 ITGA6P23229 1130 aa11.38□□□□□ -0.59
ACTN1-218ENST00000556343 IL15P40933 162 aaPredicted RBP11.38□□□□□ -0.59
ACTN1-218ENST00000556343 NUCB1Q02818 461 aa11.38□□□□□ -0.59
ACTN1-218ENST00000556343 MSL1Q68DK7 614 aa11.38□□□□□ -0.59
ACTN1-218ENST00000556343 ILDR2Q71H61 639 aa11.38□□□□□ -0.59
ACTN1-218ENST00000556343 CHD1LQ86WJ1 897 aa11.38□□□□□ -0.59
ACTN1-218ENST00000556343 RPGRQ92834 1020 aaKnown RBP11.38□□□□□ -0.59
ACTN1-218ENST00000556343 RBM17Q96I25 401 aaKnown RBP11.38□□□□□ -0.59
ACTN1-218ENST00000556343 MPHOSPH8Q99549 860 aa11.38□□□□□ -0.59
ACTN1-218ENST00000556343 BRIP1Q9BX63 1249 aa11.38□□□□□ -0.59
ACTN1-218ENST00000556343 MTFR1LQ9H019 292 aa11.38□□□□□ -0.59
ACTN1-218ENST00000556343 EXOC6BQ9Y2D4 811 aa11.38□□□□□ -0.59
ACTN1-218ENST00000556343 AFDNP55196 1824 aaKnown RBP11.37□□□□□ -0.59
ACTN1-218ENST00000556343 SCN7AQ01118 1682 aa11.37□□□□□ -0.59
ACTN1-218ENST00000556343 BCORQ6W2J9 1755 aa11.37□□□□□ -0.59
ACTN1-218ENST00000556343 EYA2O00167 538 aa11.37□□□□□ -0.59
ACTN1-218ENST00000556343 CIAO1O76071 339 aa11.37□□□□□ -0.59
ACTN1-218ENST00000556343 RFX5P48382 616 aaPredicted RBP11.37□□□□□ -0.59
ACTN1-218ENST00000556343 PTPN12Q05209 780 aaKnown RBP11.37□□□□□ -0.59
ACTN1-218ENST00000556343 DDR1Q08345 913 aa11.37□□□□□ -0.59
ACTN1-218ENST00000556343 R3HDM1Q15032 1099 aaKnown RBP11.37□□□□□ -0.59
ACTN1-218ENST00000556343 FAM161AQ3B820 660 aa11.37□□□□□ -0.59
ACTN1-218ENST00000556343 LDHAL6AQ6ZMR3 332 aa11.37□□□□□ -0.59
ACTN1-218ENST00000556343 ANKRD18AQ8IVF6 992 aa11.37□□□□□ -0.59
ACTN1-218ENST00000556343 CLASRPQ8N2M8 674 aaKnown RBP11.37□□□□□ -0.59
ACTN1-218ENST00000556343 CCDC85AQ96PX6 553 aaPredicted RBP11.37□□□□□ -0.59
ACTN1-218ENST00000556343 GREM2Q9H772 168 aa11.37□□□□□ -0.59
ACTN1-218ENST00000556343 CNNM1Q9NRU3 951 aa11.37□□□□□ -0.59
ACTN1-218ENST00000556343 RTL9Q8NET4 1388 aa11.37□□□□□ -0.59
ACTN1-218ENST00000556343 ANKRD36CQ5JPF3 1778 aa11.36□□□□□ -0.59
ACTN1-218ENST00000556343 APBB1O00213 710 aa11.36□□□□□ -0.59
ACTN1-218ENST00000556343 RHPN1Q8TCX5 695 aa11.36□□□□□ -0.59
ACTN1-218ENST00000556343 SIL1Q9H173 461 aa11.36□□□□□ -0.59
ACTN1-218ENST00000556343 TMX4Q9H1E5 349 aaPredicted RBP11.36□□□□□ -0.59
ACTN1-218ENST00000556343 CEP126Q9P2H0 1117 aa11.36□□□□□ -0.59
ACTN1-218ENST00000556343 PA2G4Q9UQ80 394 aaKnown RBP11.36□□□□□ -0.59
ACTN1-218ENST00000556343 AKAP2Q9Y2D5 859 aa11.36□□□□□ -0.59
ACTN1-218ENST00000556343 ALDH1B1P30837 517 aa11.35□□□□□ -0.59
ACTN1-218ENST00000556343 RIC1Q4ADV7 1423 aa11.35□□□□□ -0.59
ACTN1-218ENST00000556343 MROH5Q6ZUA9 1318 aa11.35□□□□□ -0.59
ACTN1-218ENST00000556343 KLRG2A4D1S0 409 aaPredicted RBP11.34□□□□□ -0.59
ACTN1-218ENST00000556343 H0YIN7 160 aa11.34□□□□□ -0.59
ACTN1-218ENST00000556343 BBOX1O75936 387 aa11.34□□□□□ -0.59
ACTN1-218ENST00000556343 IFIT2P09913 472 aaKnown RBP11.34□□□□□ -0.59
ACTN1-218ENST00000556343 NPR1P16066 1061 aa11.34□□□□□ -0.59
ACTN1-218ENST00000556343 RPS8P62241 208 aaKnown RBP11.34□□□□□ -0.59
ACTN1-218ENST00000556343 METTL24Q5JXM2 366 aa11.34□□□□□ -0.59
ACTN1-218ENST00000556343 TMC4Q7Z404 712 aa11.34□□□□□ -0.59
ACTN1-218ENST00000556343 CCDC24Q8N4L8 307 aa11.34□□□□□ -0.59
ACTN1-218ENST00000556343 GPATCH3Q96I76 525 aa11.34□□□□□ -0.59
ACTN1-218ENST00000556343 ZNF594Q96JF6 807 aaPredicted RBP11.34□□□□□ -0.59
ACTN1-218ENST00000556343 LNPKQ9C0E8 428 aa11.34□□□□□ -0.59
ACTN1-218ENST00000556343 C4AP0C0L4 1744 aa11.34□□□□□ -0.59
ACTN1-218ENST00000556343 ABCC12Q96J65 1359 aa11.33□□□□□ -0.6
ACTN1-218ENST00000556343 ZBTB7AO95365 584 aa11.33□□□□□ -0.6
ACTN1-218ENST00000556343 GRAPQ13588 217 aa11.33□□□□□ -0.6
ACTN1-218ENST00000556343 KLHDC4Q8TBB5 520 aa11.33□□□□□ -0.6
ACTN1-218ENST00000556343 GRAPLQ8TC17 118 aaPredicted RBP11.33□□□□□ -0.6
ACTN1-218ENST00000556343 MASTLQ96GX5 879 aa11.33□□□□□ -0.6
ACTN1-218ENST00000556343 CRAMP1Q96RY5 1269 aa11.33□□□□□ -0.6
ACTN1-218ENST00000556343 GPR108Q9NPR9 543 aa11.33□□□□□ -0.6
ACTN1-218ENST00000556343 BSDC1Q9NW68 430 aaPredicted RBP11.33□□□□□ -0.6
ACTN1-218ENST00000556343 QSER1Q2KHR3 1735 aa11.32□□□□□ -0.6
ACTN1-218ENST00000556343 HOXA10P31260 410 aaPredicted RBP11.32□□□□□ -0.6
ACTN1-218ENST00000556343 CRY2Q49AN0 593 aa11.32□□□□□ -0.6
ACTN1-218ENST00000556343 C2CD5Q86YS7 1000 aa11.32□□□□□ -0.6
ACTN1-218ENST00000556343 ANKRD2Q9GZV1 360 aa11.32□□□□□ -0.6
ACTN1-218ENST00000556343 BCL11AQ9H165 835 aa11.32□□□□□ -0.6
ACTN1-218ENST00000556343 SEC31BQ9NQW1 1179 aa11.32□□□□□ -0.6
ACTN1-218ENST00000556343 ATF5Q9Y2D1 282 aaPredicted RBP11.32□□□□□ -0.6
ACTN1-218ENST00000556343 PSDA5PKW4 1024 aaPredicted RBP11.31□□□□□ -0.6
ACTN1-218ENST00000556343 SMARCA5O60264 1052 aaPredicted RBP11.31□□□□□ -0.6
ACTN1-218ENST00000556343 SASH1O94885 1247 aa11.31□□□□□ -0.6
ACTN1-218ENST00000556343 RGS3P49796 1198 aa11.31□□□□□ -0.6
ACTN1-218ENST00000556343 TFCP2Q12800 502 aa11.31□□□□□ -0.6
ACTN1-218ENST00000556343 LRRC24Q50LG9 513 aa11.31□□□□□ -0.6
ACTN1-218ENST00000556343 STYK1Q6J9G0 422 aa11.31□□□□□ -0.6
ACTN1-218ENST00000556343 C3orf67Q6ZVT6 689 aa11.31□□□□□ -0.6
ACTN1-218ENST00000556343 CNKSR1Q969H4 720 aa11.31□□□□□ -0.6
ACTN1-218ENST00000556343 IL1RAPL2Q9NP60 686 aa11.31□□□□□ -0.6
ACTN1-218ENST00000556343 RIPOR2Q9Y4F9 1068 aa11.31□□□□□ -0.6
ACTN1-218ENST00000556343 ERC2O15083 957 aa11.3□□□□□ -0.6
ACTN1-218ENST00000556343 PDE8BO95263 885 aa11.3□□□□□ -0.6
ACTN1-218ENST00000556343 IFIT1P09914 478 aaKnown RBP11.3□□□□□ -0.6
ACTN1-218ENST00000556343 SRGNP10124 158 aa11.3□□□□□ -0.6
ACTN1-218ENST00000556343 TNNI3KQ59H18 835 aa11.3□□□□□ -0.6
ACTN1-218ENST00000556343 GORABQ5T7V8 394 aa11.3□□□□□ -0.6
ACTN1-218ENST00000556343 ATG9AQ7Z3C6 839 aa11.3□□□□□ -0.6
ACTN1-218ENST00000556343 AACSQ86V21 672 aa11.3□□□□□ -0.6
ACTN1-218ENST00000556343 ZNF622Q969S3 477 aaKnown RBP eCLIP11.3□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 13.6 ms