RNA–Protein interactions for RNA: ENST00000556274.5

ATXN3-237, Transcript of ataxin 3, humanhuman

TSL 1 (best)

Gene ATXN3, Length 913 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATXN3-237ENST00000556274 TMEM214Q6NUQ4 689 aaKnown RBP6.77□□□□□ -1.33
ATXN3-237ENST00000556274 LYSMD3Q7Z3D4 306 aa6.77□□□□□ -1.33
ATXN3-237ENST00000556274 ANKMY2Q8IV38 441 aa6.77□□□□□ -1.33
ATXN3-237ENST00000556274 SLC4A9Q96Q91 983 aa6.77□□□□□ -1.33
ATXN3-237ENST00000556274 GRIP2Q9C0E4 1043 aa6.77□□□□□ -1.33
ATXN3-237ENST00000556274 HRH3Q9Y5N1 445 aa6.77□□□□□ -1.33
ATXN3-237ENST00000556274 RAB3GAP2Q9H2M9 1393 aa6.77□□□□□ -1.33
ATXN3-237ENST00000556274 ZNF335Q9H4Z2 1342 aaPredicted RBP6.76□□□□□ -1.33
ATXN3-237ENST00000556274 ACIN1Q9UKV3 1341 aaKnown RBP6.76□□□□□ -1.33
ATXN3-237ENST00000556274 DKK1O94907 266 aa6.76□□□□□ -1.33
ATXN3-237ENST00000556274 FAM200AQ8TCP9 573 aa6.76□□□□□ -1.33
ATXN3-237ENST00000556274 KRTAP4-8Q9BYQ9 185 aa6.76□□□□□ -1.33
ATXN3-237ENST00000556274 NOVA2Q9UNW9 492 aaKnown RBP6.76□□□□□ -1.33
ATXN3-237ENST00000556274 RPRD2Q5VT52 1461 aaKnown RBP6.76□□□□□ -1.33
ATXN3-237ENST00000556274 TMEM131LA2VDJ0 1609 aa6.76□□□□□ -1.33
ATXN3-237ENST00000556274 A6NJY4 79 aa6.75□□□□□ -1.33
ATXN3-237ENST00000556274 ATG7O95352 703 aa6.75□□□□□ -1.33
ATXN3-237ENST00000556274 GDF11O95390 407 aa6.75□□□□□ -1.33
ATXN3-237ENST00000556274 RASSF7Q02833 373 aa6.75□□□□□ -1.33
ATXN3-237ENST00000556274 POU4F2Q12837 409 aa6.75□□□□□ -1.33
ATXN3-237ENST00000556274 TNS4Q8IZW8 715 aa6.75□□□□□ -1.33
ATXN3-237ENST00000556274 ABCF1Q8NE71 845 aaKnown RBP eCLIP6.75□□□□□ -1.33
ATXN3-237ENST00000556274 HINFPQ9BQA5 517 aa6.75□□□□□ -1.33
ATXN3-237ENST00000556274 FHDC1Q9C0D6 1143 aaPredicted RBP6.75□□□□□ -1.33
ATXN3-237ENST00000556274 CLTCL1P53675 1640 aa6.75□□□□□ -1.33
ATXN3-237ENST00000556274 PTPRTO14522 1441 aa6.75□□□□□ -1.33
ATXN3-237ENST00000556274 NPHP4O75161 1426 aaPredicted RBP6.75□□□□□ -1.33
ATXN3-237ENST00000556274 NOS1P29475 1434 aa6.75□□□□□ -1.33
ATXN3-237ENST00000556274 KDM5AP29375 1690 aaKnown RBP6.74□□□□□ -1.33
ATXN3-237ENST00000556274 CDK2AP1O14519 115 aa6.74□□□□□ -1.33
ATXN3-237ENST00000556274 RHOQP17081 205 aa6.74□□□□□ -1.33
ATXN3-237ENST00000556274 GNASQ5JWF2 1037 aa6.74□□□□□ -1.33
ATXN3-237ENST00000556274 TSEN2Q8NCE0 465 aaKnown RBP6.74□□□□□ -1.33
ATXN3-237ENST00000556274 ADGRB3O60242 1522 aa6.74□□□□□ -1.33
ATXN3-237ENST00000556274 STRCP1A6NGW2 1772 aa6.74□□□□□ -1.33
ATXN3-237ENST00000556274 RIMS2Q9UQ26 1411 aa6.74□□□□□ -1.33
ATXN3-237ENST00000556274 CHD2O14647 1828 aaKnown RBP6.73□□□□□ -1.33
ATXN3-237ENST00000556274 PLA2R1Q13018 1463 aa6.73□□□□□ -1.33
ATXN3-237ENST00000556274 SCAF11Q99590 1463 aaKnown RBP6.73□□□□□ -1.33
ATXN3-237ENST00000556274 TMEM2Q9UHN6 1383 aa6.73□□□□□ -1.33
ATXN3-237ENST00000556274 M0R2N6 131 aa6.73□□□□□ -1.33
ATXN3-237ENST00000556274 VSIG8P0DPA2 414 aa6.73□□□□□ -1.33
ATXN3-237ENST00000556274 PIP4K2BP78356 416 aa6.73□□□□□ -1.33
ATXN3-237ENST00000556274 PTSQ03393 145 aa6.73□□□□□ -1.33
ATXN3-237ENST00000556274 NEUROD1Q13562 356 aa6.73□□□□□ -1.33
ATXN3-237ENST00000556274 NBPF10Q6P3W6 841 aaKnown RBP6.73□□□□□ -1.33
ATXN3-237ENST00000556274 TAS1R3Q7RTX0 852 aa6.73□□□□□ -1.33
ATXN3-237ENST00000556274 NBPF15Q8N660 670 aa6.73□□□□□ -1.33
ATXN3-237ENST00000556274 ARXQ96QS3 562 aa6.73□□□□□ -1.33
ATXN3-237ENST00000556274 PCGF6Q9BYE7 350 aa6.73□□□□□ -1.33
ATXN3-237ENST00000556274 SCHIP1Q9P0W5 487 aaPredicted RBP6.73□□□□□ -1.33
ATXN3-237ENST00000556274 NEURL4Q96JN8 1562 aa6.73□□□□□ -1.33
ATXN3-237ENST00000556274 PPLO60437 1756 aa6.72□□□□□ -1.33
ATXN3-237ENST00000556274 SPATA31C2B4DYI2 1134 aa6.72□□□□□ -1.33
ATXN3-237ENST00000556274 UBAP1LF5GYI3 381 aa6.72□□□□□ -1.33
ATXN3-237ENST00000556274 LGR5O75473 907 aa6.72□□□□□ -1.33
ATXN3-237ENST00000556274 PHKA2P46019 1235 aa6.72□□□□□ -1.33
ATXN3-237ENST00000556274 ELOAQ14241 798 aaKnown RBP6.72□□□□□ -1.33
ATXN3-237ENST00000556274 MTFR1Q15390 333 aa6.72□□□□□ -1.33
ATXN3-237ENST00000556274 RHBDD1Q8TEB9 315 aa6.72□□□□□ -1.33
ATXN3-237ENST00000556274 XIRP1Q702N8 1843 aaKnown RBP6.71□□□□□ -1.33
ATXN3-237ENST00000556274 CCDC144AA2RUR9 1427 aa6.71□□□□□ -1.34
ATXN3-237ENST00000556274 C4orf17Q53FE4 359 aa6.71□□□□□ -1.34
ATXN3-237ENST00000556274 TBCELQ5QJ74 424 aa6.71□□□□□ -1.34
ATXN3-237ENST00000556274 FBXO41Q8TF61 875 aa6.71□□□□□ -1.34
ATXN3-237ENST00000556274 STK32AQ8WU08 396 aa6.71□□□□□ -1.34
ATXN3-237ENST00000556274 NIFKQ9BYG3 293 aaKnown RBP6.71□□□□□ -1.34
ATXN3-237ENST00000556274 CABP1Q9NZU7 370 aa6.71□□□□□ -1.34
ATXN3-237ENST00000556274 ZMIZ1Q9ULJ6 1067 aa6.71□□□□□ -1.34
ATXN3-237ENST00000556274 SLIT1O75093 1534 aa6.71□□□□□ -1.34
ATXN3-237ENST00000556274 EPHA4P54764 986 aa6.7□□□□□ -1.34
ATXN3-237ENST00000556274 WDR44Q5JSH3 913 aa6.7□□□□□ -1.34
ATXN3-237ENST00000556274 SLC9A9Q8IVB4 645 aa6.7□□□□□ -1.34
ATXN3-237ENST00000556274 DCAF11Q8TEB1 546 aa6.7□□□□□ -1.34
ATXN3-237ENST00000556274 AIDAQ96BJ3 306 aa6.7□□□□□ -1.34
ATXN3-237ENST00000556274 TSPAN10Q9H1Z9 355 aaPredicted RBP6.7□□□□□ -1.34
ATXN3-237ENST00000556274 TIMMDC1Q9NPL8 285 aa6.7□□□□□ -1.34
ATXN3-237ENST00000556274 STK26Q9P289 416 aa6.7□□□□□ -1.34
ATXN3-237ENST00000556274 IQSEC3Q9UPP2 1182 aaPredicted RBP6.7□□□□□ -1.34
ATXN3-237ENST00000556274 USP3Q9Y6I4 520 aa6.7□□□□□ -1.34
ATXN3-237ENST00000556274 TRPM2O94759 1503 aa6.7□□□□□ -1.34
ATXN3-237ENST00000556274 MED14O60244 1454 aa6.69□□□□□ -1.34
ATXN3-237ENST00000556274 ARHGAP23Q9P227 1491 aa6.69□□□□□ -1.34
ATXN3-237ENST00000556274 TOM1O60784 492 aa6.69□□□□□ -1.34
ATXN3-237ENST00000556274 CSB-PGBD3P0DP91 1061 aa6.69□□□□□ -1.34
ATXN3-237ENST00000556274 KCNA6P17658 529 aa6.69□□□□□ -1.34
ATXN3-237ENST00000556274 PLA2G4AP47712 749 aa6.69□□□□□ -1.34
ATXN3-237ENST00000556274 FOXK2Q01167 660 aa6.69□□□□□ -1.34
ATXN3-237ENST00000556274 CCDC155Q8N6L0 562 aa6.69□□□□□ -1.34
ATXN3-237ENST00000556274 SCG3Q8WXD2 468 aaKnown RBP6.69□□□□□ -1.34
ATXN3-237ENST00000556274 ZNF232Q9UNY5 417 aa6.69□□□□□ -1.34
ATXN3-237ENST00000556274 PARP3Q9Y6F1 533 aa6.69□□□□□ -1.34
ATXN3-237ENST00000556274 ATAD2Q6PL18 1390 aa6.69□□□□□ -1.34
ATXN3-237ENST00000556274 SENP3-EIF4A1A0A087X0R7 540 aa6.68□□□□□ -1.34
ATXN3-237ENST00000556274 SLC35F4A4IF30 521 aa6.68□□□□□ -1.34
ATXN3-237ENST00000556274 PPP1R12BO60237 982 aaPredicted RBP6.68□□□□□ -1.34
ATXN3-237ENST00000556274 TMEM164Q5U3C3 297 aa6.68□□□□□ -1.34
ATXN3-237ENST00000556274 SIN3AQ96ST3 1273 aa6.68□□□□□ -1.34
ATXN3-237ENST00000556274 GAS2L1Q99501 681 aaPredicted RBP6.68□□□□□ -1.34
ATXN3-237ENST00000556274 AMOTL2Q9Y2J4 779 aa6.68□□□□□ -1.34
Retrieved 100 of 20,778 RNA–protein pairs in 32.2 ms