RNA–Protein interactions for RNA: ENST00000556166.2

GABRB3-210, Transcript of gamma-aminobutyric acid type A receptor beta3 subunit, humanhuman

TSL 2

Gene GABRB3, Length 1,583 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GABRB3-210ENST00000556166 GNAI2P04899 355 aa14.4□□□□□ -0.1
GABRB3-210ENST00000556166 HOXA10P31260 410 aaPredicted RBP14.4□□□□□ -0.1
GABRB3-210ENST00000556166 RABL6Q3YEC7 729 aaPredicted RBP14.4□□□□□ -0.1
GABRB3-210ENST00000556166 GREM2Q9H772 168 aa14.4□□□□□ -0.1
GABRB3-210ENST00000556166 SEC31BQ9NQW1 1179 aa14.4□□□□□ -0.1
GABRB3-210ENST00000556166 TNRC6CQ9HCJ0 1690 aaKnown RBP14.39□□□□□ -0.11
GABRB3-210ENST00000556166 H0YIN7 160 aa14.39□□□□□ -0.11
GABRB3-210ENST00000556166 N4BP2Q86UW6 1770 aaPredicted RBP14.39□□□□□ -0.11
GABRB3-210ENST00000556166 ANKRD31Q8N7Z5 1873 aa14.39□□□□□ -0.11
GABRB3-210ENST00000556166 HSP90B1P14625 803 aaKnown RBP14.39□□□□□ -0.11
GABRB3-210ENST00000556166 FAM161AQ3B820 660 aa14.39□□□□□ -0.11
GABRB3-210ENST00000556166 SLC51AQ86UW1 340 aa14.39□□□□□ -0.11
GABRB3-210ENST00000556166 DDX60Q8IY21 1712 aaKnown RBP14.38□□□□□ -0.11
GABRB3-210ENST00000556166 NPR1P16066 1061 aa14.38□□□□□ -0.11
GABRB3-210ENST00000556166 CCDC152Q4G0S7 254 aa14.38□□□□□ -0.11
GABRB3-210ENST00000556166 STYK1Q6J9G0 422 aa14.38□□□□□ -0.11
GABRB3-210ENST00000556166 SIRT2Q8IXJ6 389 aa14.38□□□□□ -0.11
GABRB3-210ENST00000556166 ZNF622Q969S3 477 aaKnown RBP eCLIP14.38□□□□□ -0.11
GABRB3-210ENST00000556166 MASTLQ96GX5 879 aa14.38□□□□□ -0.11
GABRB3-210ENST00000556166 WWC3Q9ULE0 1092 aa14.38□□□□□ -0.11
GABRB3-210ENST00000556166 GTF3C3Q9Y5Q9 886 aa14.38□□□□□ -0.11
GABRB3-210ENST00000556166 COL4A1P02462 1669 aa14.37□□□□□ -0.11
GABRB3-210ENST00000556166 RFX5P48382 616 aaPredicted RBP14.37□□□□□ -0.11
GABRB3-210ENST00000556166 RPGRQ92834 1020 aaKnown RBP14.37□□□□□ -0.11
GABRB3-210ENST00000556166 CELF1Q92879 486 aaKnown RBP14.37□□□□□ -0.11
GABRB3-210ENST00000556166 CRAMP1Q96RY5 1269 aa14.37□□□□□ -0.11
GABRB3-210ENST00000556166 PDZRN3Q9UPQ7 1066 aa14.37□□□□□ -0.11
GABRB3-210ENST00000556166 PCDHB15Q9Y5E8 787 aa14.37□□□□□ -0.11
GABRB3-210ENST00000556166 LRP5O75197 1615 aa14.36□□□□□ -0.11
GABRB3-210ENST00000556166 PNMA6EA0A0J9YXQ4 647 aa14.36□□□□□ -0.11
GABRB3-210ENST00000556166 ITGA6P23229 1130 aa14.36□□□□□ -0.11
GABRB3-210ENST00000556166 ATP8B2P98198 1209 aa14.36□□□□□ -0.11
GABRB3-210ENST00000556166 MTX1Q13505 466 aa14.36□□□□□ -0.11
GABRB3-210ENST00000556166 RBM17Q96I25 401 aaKnown RBP14.36□□□□□ -0.11
GABRB3-210ENST00000556166 HDAC5Q9UQL6 1122 aa14.36□□□□□ -0.11
GABRB3-210ENST00000556166 RTL9Q8NET4 1388 aa14.36□□□□□ -0.11
GABRB3-210ENST00000556166 KIF13BQ9NQT8 1826 aa14.36□□□□□ -0.11
GABRB3-210ENST00000556166 CEP85Q6P2H3 762 aa14.35□□□□□ -0.11
GABRB3-210ENST00000556166 DDX46Q7L014 1031 aaKnown RBP14.35□□□□□ -0.11
GABRB3-210ENST00000556166 KLHDC4Q8TBB5 520 aa14.35□□□□□ -0.11
GABRB3-210ENST00000556166 ZNF594Q96JF6 807 aaPredicted RBP14.35□□□□□ -0.11
GABRB3-210ENST00000556166 CHMP3Q9Y3E7 222 aa14.35□□□□□ -0.11
GABRB3-210ENST00000556166 KIAA1551Q9HCM1 1747 aa14.35□□□□□ -0.11
GABRB3-210ENST00000556166 RPS8P62241 208 aaKnown RBP14.34□□□□□ -0.11
GABRB3-210ENST00000556166 IFIT5Q13325 482 aaKnown RBP14.34□□□□□ -0.11
GABRB3-210ENST00000556166 GRAPQ13588 217 aa14.34□□□□□ -0.11
GABRB3-210ENST00000556166 OLFM4Q6UX06 510 aa14.34□□□□□ -0.11
GABRB3-210ENST00000556166 GRAPLQ8TC17 118 aaPredicted RBP14.34□□□□□ -0.11
GABRB3-210ENST00000556166 C7orf43Q8WVR3 580 aa14.34□□□□□ -0.11
GABRB3-210ENST00000556166 PIM2Q9P1W9 311 aa14.34□□□□□ -0.11
GABRB3-210ENST00000556166 SRGAP3O43295 1099 aa14.34□□□□□ -0.11
GABRB3-210ENST00000556166 POLA2Q14181 598 aa14.34□□□□□ -0.11
GABRB3-210ENST00000556166 PRPF40BQ6NWY9 871 aaKnown RBP14.34□□□□□ -0.11
GABRB3-210ENST00000556166 TTLL6Q8N841 843 aa14.34□□□□□ -0.11
GABRB3-210ENST00000556166 CNKSR1Q969H4 720 aa14.34□□□□□ -0.11
GABRB3-210ENST00000556166 CHMP4BQ9H444 224 aaKnown RBP14.34□□□□□ -0.11
GABRB3-210ENST00000556166 COL11A2P13942 1736 aaPredicted RBP14.33□□□□□ -0.12
GABRB3-210ENST00000556166 ANKRD18BA2A2Z9 1011 aa14.33□□□□□ -0.12
GABRB3-210ENST00000556166 BBOX1O75936 387 aa14.33□□□□□ -0.12
GABRB3-210ENST00000556166 ALDH1B1P30837 517 aa14.33□□□□□ -0.12
GABRB3-210ENST00000556166 PTPN12Q05209 780 aaKnown RBP14.33□□□□□ -0.12
GABRB3-210ENST00000556166 CCDC57Q2TAC2 916 aa14.33□□□□□ -0.12
GABRB3-210ENST00000556166 SSH3Q8TE77 659 aa14.33□□□□□ -0.12
GABRB3-210ENST00000556166 PUS3Q9BZE2 481 aaKnown RBP14.33□□□□□ -0.12
GABRB3-210ENST00000556166 PA2G4Q9UQ80 394 aaKnown RBP14.33□□□□□ -0.12
GABRB3-210ENST00000556166 LAMB2P55268 1798 aa14.32□□□□□ -0.12
GABRB3-210ENST00000556166 DALRD3Q5D0E6 543 aaKnown RBP14.31□□□□□ -0.12
GABRB3-210ENST00000556166 ANKRD18AQ8IVF6 992 aa14.31□□□□□ -0.12
GABRB3-210ENST00000556166 RPAP2Q8IXW5 612 aaPredicted RBP14.31□□□□□ -0.12
GABRB3-210ENST00000556166 ZNF219Q9P2Y4 722 aaPredicted RBP14.31□□□□□ -0.12
GABRB3-210ENST00000556166 C21orf2O43822 256 aa14.3□□□□□ -0.12
GABRB3-210ENST00000556166 YBX3P16989 372 aaKnown RBP eCLIP14.3□□□□□ -0.12
GABRB3-210ENST00000556166 LRRC24Q50LG9 513 aa14.3□□□□□ -0.12
GABRB3-210ENST00000556166 CDC5LQ99459 802 aaKnown RBP14.3□□□□□ -0.12
GABRB3-210ENST00000556166 COPRSQ9NQ92 184 aa14.3□□□□□ -0.12
GABRB3-210ENST00000556166 BSDC1Q9NW68 430 aaPredicted RBP14.3□□□□□ -0.12
GABRB3-210ENST00000556166 BCS1LQ9Y276 419 aa14.3□□□□□ -0.12
GABRB3-210ENST00000556166 WTIPA6NIX2 430 aaPredicted RBP14.3□□□□□ -0.12
GABRB3-210ENST00000556166 PPEF1O14829 653 aaPredicted RBP14.3□□□□□ -0.12
GABRB3-210ENST00000556166 ATG9AQ7Z3C6 839 aa14.3□□□□□ -0.12
GABRB3-210ENST00000556166 MINPP1Q9UNW1 487 aa14.3□□□□□ -0.12
GABRB3-210ENST00000556166 ATP6V0A2Q9Y487 856 aa14.3□□□□□ -0.12
GABRB3-210ENST00000556166 RIPOR2Q9Y4F9 1068 aa14.3□□□□□ -0.12
GABRB3-210ENST00000556166 TAF1P21675 1872 aa14.3□□□□□ -0.12
GABRB3-210ENST00000556166 GOLGB1Q14789 3259 aaKnown RBP14.3□□□□□ -0.12
GABRB3-210ENST00000556166 AAMPQ13685 434 aa14.29□□□□□ -0.12
GABRB3-210ENST00000556166 LDHAL6AQ6ZMR3 332 aa14.29□□□□□ -0.12
GABRB3-210ENST00000556166 SP8Q8IXZ3 490 aa14.29□□□□□ -0.12
GABRB3-210ENST00000556166 SIL1Q9H173 461 aa14.29□□□□□ -0.12
GABRB3-210ENST00000556166 SLX4Q8IY92 1834 aa14.29□□□□□ -0.12
GABRB3-210ENST00000556166 IGHMBP2P38935 993 aaKnown RBP14.28□□□□□ -0.12
GABRB3-210ENST00000556166 TAF7LQ5H9L4 462 aa14.28□□□□□ -0.12
GABRB3-210ENST00000556166 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP14.28□□□□□ -0.12
GABRB3-210ENST00000556166 EYA2O00167 538 aa14.27□□□□□ -0.12
GABRB3-210ENST00000556166 IGHDP01880 384 aa14.27□□□□□ -0.12
GABRB3-210ENST00000556166 GPSM2P81274 684 aa14.27□□□□□ -0.12
GABRB3-210ENST00000556166 HELBQ8NG08 1087 aaPredicted RBP14.27□□□□□ -0.12
GABRB3-210ENST00000556166 MPHOSPH8Q99549 860 aa14.27□□□□□ -0.12
GABRB3-210ENST00000556166 NOP58Q9Y2X3 529 aaKnown RBP14.27□□□□□ -0.12
GABRB3-210ENST00000556166 SNAP23O00161 211 aa14.26□□□□□ -0.13
Retrieved 100 of 20,778 RNA–protein pairs in 17.7 ms