RNA–Protein interactions for RNA: ENST00000556054.5

APEX1-212, Transcript of apurinic/apyrimidinic endodeoxyribonuclease 1, humanhuman

TSL 3

Gene APEX1, Length 773 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APEX1-212ENST00000556054 RTL5Q5HYW3 569 aaPredicted RBP14.93□□□□□ -0.02
APEX1-212ENST00000556054 NUTM1Q86Y26 1132 aa14.93□□□□□ -0.02
APEX1-212ENST00000556054 SMC5Q8IY18 1101 aa14.93□□□□□ -0.02
APEX1-212ENST00000556054 BRIP1Q9BX63 1249 aa14.93□□□□□ -0.02
APEX1-212ENST00000556054 COPRSQ9NQ92 184 aa14.93□□□□□ -0.02
APEX1-212ENST00000556054 PDZRN3Q9UPQ7 1066 aa14.93□□□□□ -0.02
APEX1-212ENST00000556054 FAM177BA6PVY3 158 aa14.92□□□□□ -0.02
APEX1-212ENST00000556054 HCLS1P14317 486 aaPredicted RBP14.92□□□□□ -0.02
APEX1-212ENST00000556054 RFX5P48382 616 aaPredicted RBP14.92□□□□□ -0.02
APEX1-212ENST00000556054 R3HDM1Q15032 1099 aaKnown RBP14.92□□□□□ -0.02
APEX1-212ENST00000556054 HSP90AB4PQ58FF6 505 aa14.92□□□□□ -0.02
APEX1-212ENST00000556054 PDGFDQ9GZP0 370 aaPredicted RBP14.92□□□□□ -0.02
APEX1-212ENST00000556054 ABCC12Q96J65 1359 aa14.92□□□□□ -0.02
APEX1-212ENST00000556054 CRY2Q49AN0 593 aa14.91□□□□□ -0.02
APEX1-212ENST00000556054 B4GALNT3Q6L9W6 998 aa14.91□□□□□ -0.02
APEX1-212ENST00000556054 ANKRD31Q8N7Z5 1873 aa14.91□□□□□ -0.02
APEX1-212ENST00000556054 NPHP1O15259 732 aa14.9□□□□□ -0.02
APEX1-212ENST00000556054 RAB11FIP3O75154 756 aa14.9□□□□□ -0.02
APEX1-212ENST00000556054 PTPN12Q05209 780 aaKnown RBP14.9□□□□□ -0.02
APEX1-212ENST00000556054 IFIT5Q13325 482 aaKnown RBP14.9□□□□□ -0.02
APEX1-212ENST00000556054 CCDC57Q2TAC2 916 aa14.9□□□□□ -0.02
APEX1-212ENST00000556054 KIF13BQ9NQT8 1826 aa14.89□□□□□ -0.03
APEX1-212ENST00000556054 ANKRD18BA2A2Z9 1011 aa14.89□□□□□ -0.03
APEX1-212ENST00000556054 HOXA10P31260 410 aaPredicted RBP14.89□□□□□ -0.03
APEX1-212ENST00000556054 PDE6BP35913 854 aa14.89□□□□□ -0.03
APEX1-212ENST00000556054 MSL1Q68DK7 614 aa14.89□□□□□ -0.03
APEX1-212ENST00000556054 TNRC6CQ9HCJ0 1690 aaKnown RBP14.88□□□□□ -0.03
APEX1-212ENST00000556054 CIAO1O76071 339 aa14.88□□□□□ -0.03
APEX1-212ENST00000556054 ITGA6P23229 1130 aa14.88□□□□□ -0.03
APEX1-212ENST00000556054 POLD1P28340 1107 aa14.88□□□□□ -0.03
APEX1-212ENST00000556054 FAM161AQ3B820 660 aa14.88□□□□□ -0.03
APEX1-212ENST00000556054 ERC1Q8IUD2 1116 aa14.88□□□□□ -0.03
APEX1-212ENST00000556054 GREM2Q9H772 168 aa14.88□□□□□ -0.03
APEX1-212ENST00000556054 SURF6O75683 361 aaKnown RBP14.87□□□□□ -0.03
APEX1-212ENST00000556054 CDC5LQ99459 802 aaKnown RBP14.87□□□□□ -0.03
APEX1-212ENST00000556054 SGIP1Q9BQI5 828 aa14.87□□□□□ -0.03
APEX1-212ENST00000556054 CHMP3Q9Y3E7 222 aa14.87□□□□□ -0.03
APEX1-212ENST00000556054 SRCAPQ6ZRS2 3230 aa14.87□□□□□ -0.03
APEX1-212ENST00000556054 C10orf71Q711Q0 1435 aa14.86□□□□□ -0.03
APEX1-212ENST00000556054 LRP5O75197 1615 aa14.86□□□□□ -0.03
APEX1-212ENST00000556054 EYA2O00167 538 aa14.86□□□□□ -0.03
APEX1-212ENST00000556054 G3BP1Q13283 466 aaKnown RBP eCLIP14.86□□□□□ -0.031e-8■■■□□ 19
APEX1-212ENST00000556054 C3orf67Q6ZVT6 689 aa14.86□□□□□ -0.03
APEX1-212ENST00000556054 CRAMP1Q96RY5 1269 aa14.86□□□□□ -0.03
APEX1-212ENST00000556054 ZBTB7AO95365 584 aa14.85□□□□□ -0.03
APEX1-212ENST00000556054 IL15P40933 162 aaPredicted RBP14.85□□□□□ -0.03
APEX1-212ENST00000556054 NUCB1Q02818 461 aa14.85□□□□□ -0.03
APEX1-212ENST00000556054 DDX46Q7L014 1031 aaKnown RBP14.85□□□□□ -0.03
APEX1-212ENST00000556054 TMC4Q7Z404 712 aa14.85□□□□□ -0.03
APEX1-212ENST00000556054 KIF1BPQ96EK5 621 aa14.85□□□□□ -0.03
APEX1-212ENST00000556054 PSDA5PKW4 1024 aaPredicted RBP14.84□□□□□ -0.03
APEX1-212ENST00000556054 BBOX1O75936 387 aa14.84□□□□□ -0.03
APEX1-212ENST00000556054 SRGNP10124 158 aa14.84□□□□□ -0.03
APEX1-212ENST00000556054 NPR1P16066 1061 aa14.84□□□□□ -0.03
APEX1-212ENST00000556054 TAF7LQ5H9L4 462 aa14.84□□□□□ -0.03
APEX1-212ENST00000556054 RBM17Q96I25 401 aaKnown RBP14.84□□□□□ -0.03
APEX1-212ENST00000556054 LRRCC1Q9C099 1032 aa14.84□□□□□ -0.03
APEX1-212ENST00000556054 GPR108Q9NPR9 543 aa14.84□□□□□ -0.03
APEX1-212ENST00000556054 BSDC1Q9NW68 430 aaPredicted RBP14.84□□□□□ -0.03
APEX1-212ENST00000556054 PA2G4Q9UQ80 394 aaKnown RBP14.84□□□□□ -0.03
APEX1-212ENST00000556054 EXOC6BQ9Y2D4 811 aa14.84□□□□□ -0.03
APEX1-212ENST00000556054 RIPOR2Q9Y4F9 1068 aa14.84□□□□□ -0.03
APEX1-212ENST00000556054 DLEC1Q9Y238 1755 aa14.83□□□□□ -0.03
APEX1-212ENST00000556054 ALDH1B1P30837 517 aa14.83□□□□□ -0.04
APEX1-212ENST00000556054 IGHMBP2P38935 993 aaKnown RBP14.83□□□□□ -0.04
APEX1-212ENST00000556054 PTGER2P43116 358 aa14.83□□□□□ -0.04
APEX1-212ENST00000556054 RPS8P62241 208 aaKnown RBP14.83□□□□□ -0.04
APEX1-212ENST00000556054 GRAPQ13588 217 aa14.83□□□□□ -0.04
APEX1-212ENST00000556054 STYK1Q6J9G0 422 aa14.83□□□□□ -0.04
APEX1-212ENST00000556054 LDHAL6AQ6ZMR3 332 aa14.83□□□□□ -0.04
APEX1-212ENST00000556054 ATG9AQ7Z3C6 839 aa14.83□□□□□ -0.04
APEX1-212ENST00000556054 ANKRD18AQ8IVF6 992 aa14.83□□□□□ -0.04
APEX1-212ENST00000556054 CCDC24Q8N4L8 307 aa14.83□□□□□ -0.04
APEX1-212ENST00000556054 GRAPLQ8TC17 118 aaPredicted RBP14.83□□□□□ -0.04
APEX1-212ENST00000556054 RHPN1Q8TCX5 695 aa14.83□□□□□ -0.04
APEX1-212ENST00000556054 RPGRQ92834 1020 aaKnown RBP14.83□□□□□ -0.04
APEX1-212ENST00000556054 MASTLQ96GX5 879 aa14.83□□□□□ -0.04
APEX1-212ENST00000556054 SPON1Q9HCB6 807 aa14.83□□□□□ -0.04
APEX1-212ENST00000556054 SEC31BQ9NQW1 1179 aa14.83□□□□□ -0.04
APEX1-212ENST00000556054 ATF5Q9Y2D1 282 aaPredicted RBP14.83□□□□□ -0.04
APEX1-212ENST00000556054 H0YIN7 160 aa14.82□□□□□ -0.04
APEX1-212ENST00000556054 SASH1O94885 1247 aa14.82□□□□□ -0.04
APEX1-212ENST00000556054 TGFB2P61812 414 aa14.82□□□□□ -0.04
APEX1-212ENST00000556054 CHD1LQ86WJ1 897 aa14.82□□□□□ -0.04
APEX1-212ENST00000556054 KLHDC4Q8TBB5 520 aa14.82□□□□□ -0.04
APEX1-212ENST00000556054 ZNF594Q96JF6 807 aaPredicted RBP14.82□□□□□ -0.04
APEX1-212ENST00000556054 MPHOSPH8Q99549 860 aa14.82□□□□□ -0.04
APEX1-212ENST00000556054 ZBTB47Q9UFB7 747 aaPredicted RBP14.82□□□□□ -0.04
APEX1-212ENST00000556054 CD2APQ9Y5K6 639 aa14.82□□□□□ -0.04
APEX1-212ENST00000556054 MROH5Q6ZUA9 1318 aa14.82□□□□□ -0.04
APEX1-212ENST00000556054 TAF1P21675 1872 aa14.82□□□□□ -0.04
APEX1-212ENST00000556054 COL11A2P13942 1736 aaPredicted RBP14.81□□□□□ -0.04
APEX1-212ENST00000556054 OS9Q13438 667 aaPredicted RBP14.81□□□□□ -0.04
APEX1-212ENST00000556054 ANKRD45Q5TZF3 282 aa14.81□□□□□ -0.04
APEX1-212ENST00000556054 CCDC85AQ96PX6 553 aaPredicted RBP14.81□□□□□ -0.04
APEX1-212ENST00000556054 C2CD5Q86YS7 1000 aa14.8□□□□□ -0.04
APEX1-212ENST00000556054 CELF1Q92879 486 aaKnown RBP14.8□□□□□ -0.04
APEX1-212ENST00000556054 CNNM1Q9NRU3 951 aa14.8□□□□□ -0.04
APEX1-212ENST00000556054 CEP126Q9P2H0 1117 aa14.8□□□□□ -0.04
APEX1-212ENST00000556054 SPEF2Q9C093 1822 aa14.8□□□□□ -0.04
Retrieved 100 of 20,778 RNA–protein pairs in 54.9 ms