RNA–Protein interactions for RNA: ENST00000555961.1

NEK9-208, Transcript of NIMA related kinase 9, humanhuman

TSL 3

Gene NEK9, Length 288 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEK9-208ENST00000555961 DYRK3O43781 588 aa3.47□□□□□ -1.85
NEK9-208ENST00000555961 RARAP10276 462 aa3.47□□□□□ -1.85
NEK9-208ENST00000555961 CPB1P15086 417 aa3.47□□□□□ -1.85
NEK9-208ENST00000555961 LMOD1P29536 600 aaPredicted RBP3.47□□□□□ -1.85
NEK9-208ENST00000555961 IDH3AP50213 366 aa3.47□□□□□ -1.85
NEK9-208ENST00000555961 DGKZQ13574 1117 aa3.47□□□□□ -1.85
NEK9-208ENST00000555961 ELMSAN1Q6PJG2 1045 aa3.47□□□□□ -1.85
NEK9-208ENST00000555961 KRT25Q7Z3Z0 450 aa3.47□□□□□ -1.85
NEK9-208ENST00000555961 TXNRD3Q86VQ6 643 aa3.47□□□□□ -1.85
NEK9-208ENST00000555961 WFDC8Q8IUA0 241 aa3.47□□□□□ -1.85
NEK9-208ENST00000555961 CCER1Q8TC90 406 aaPredicted RBP3.47□□□□□ -1.85
NEK9-208ENST00000555961 GSX2Q9BZM3 304 aa3.47□□□□□ -1.85
NEK9-208ENST00000555961 LGR5O75473 907 aa3.46□□□□□ -1.86
NEK9-208ENST00000555961 DKK1O94907 266 aa3.46□□□□□ -1.86
NEK9-208ENST00000555961 MAP3K6O95382 1288 aa3.46□□□□□ -1.86
NEK9-208ENST00000555961 RFX1P22670 979 aa3.46□□□□□ -1.86
NEK9-208ENST00000555961 PDE4CQ08493 712 aa3.46□□□□□ -1.86
NEK9-208ENST00000555961 PTK7Q13308 1070 aa3.46□□□□□ -1.86
NEK9-208ENST00000555961 COL9A3Q14050 684 aaPredicted RBP3.46□□□□□ -1.86
NEK9-208ENST00000555961 ADGRE1Q14246 886 aa3.46□□□□□ -1.86
NEK9-208ENST00000555961 MBTPS1Q14703 1052 aa3.46□□□□□ -1.86
NEK9-208ENST00000555961 CRTC2Q53ET0 693 aaPredicted RBP3.46□□□□□ -1.86
NEK9-208ENST00000555961 NKAPLQ5M9Q1 402 aa3.46□□□□□ -1.86
NEK9-208ENST00000555961 DMRTC2Q8IXT2 367 aaPredicted RBP3.46□□□□□ -1.86
NEK9-208ENST00000555961 DTWD1Q8N5C7 304 aa3.46□□□□□ -1.86
NEK9-208ENST00000555961 FAM200AQ8TCP9 573 aa3.46□□□□□ -1.86
NEK9-208ENST00000555961 DCAF11Q8TEB1 546 aa3.46□□□□□ -1.86
NEK9-208ENST00000555961 TP53INP1Q96A56 240 aa3.46□□□□□ -1.86
NEK9-208ENST00000555961 LENG1Q96BZ8 264 aaPredicted RBP3.46□□□□□ -1.86
NEK9-208ENST00000555961 RBSNQ9H1K0 784 aa3.46□□□□□ -1.86
NEK9-208ENST00000555961 C11orf16Q9NQ32 467 aa3.46□□□□□ -1.86
NEK9-208ENST00000555961 KLK14Q9P0G3 267 aa3.46□□□□□ -1.86
NEK9-208ENST00000555961 FRRS1LQ9P0K9 344 aa3.46□□□□□ -1.86
NEK9-208ENST00000555961 SERPINA10Q9UK55 444 aa3.46□□□□□ -1.86
NEK9-208ENST00000555961 MICAL2O94851 1124 aa3.45□□□□□ -1.86
NEK9-208ENST00000555961 GHRHP01286 108 aa3.45□□□□□ -1.86
NEK9-208ENST00000555961 PSAPP07602 524 aa3.45□□□□□ -1.86
NEK9-208ENST00000555961 H2AFB1P0C5Y9 115 aa3.45□□□□□ -1.86
NEK9-208ENST00000555961 H2AFB2P0C5Z0 115 aa3.45□□□□□ -1.86
NEK9-208ENST00000555961 EIF2AK2P19525 551 aaKnown RBP3.45□□□□□ -1.86
NEK9-208ENST00000555961 AFF1P51825 1210 aaKnown RBP3.45□□□□□ -1.86
NEK9-208ENST00000555961 KRTAP1-1Q07627 177 aa3.45□□□□□ -1.86
NEK9-208ENST00000555961 C11orf91Q3C1V1 193 aa3.45□□□□□ -1.86
NEK9-208ENST00000555961 MSL1Q68DK7 614 aa3.45□□□□□ -1.86
NEK9-208ENST00000555961 DHX32Q7L7V1 743 aaKnown RBP3.45□□□□□ -1.86
NEK9-208ENST00000555961 FMR1NBQ8N0W7 255 aaPredicted RBP3.45□□□□□ -1.86
NEK9-208ENST00000555961 FNBP4Q8N3X1 1017 aaPredicted RBP3.45□□□□□ -1.86
NEK9-208ENST00000555961 ZFP64Q9NPA5 681 aa3.45□□□□□ -1.86
NEK9-208ENST00000555961 SELPP16109 830 aa3.44□□□□□ -1.86
NEK9-208ENST00000555961 INPP5BP32019 993 aa3.44□□□□□ -1.86
NEK9-208ENST00000555961 NRLP54845 237 aa3.44□□□□□ -1.86
NEK9-208ENST00000555961 GPLD1P80108 840 aa3.44□□□□□ -1.86
NEK9-208ENST00000555961 MLLT1Q03111 559 aaPredicted RBP3.44□□□□□ -1.86
NEK9-208ENST00000555961 PRSS36Q5K4E3 855 aa3.44□□□□□ -1.86
NEK9-208ENST00000555961 KANK4Q5T7N3 995 aaPredicted RBP3.44□□□□□ -1.86
NEK9-208ENST00000555961 SHISA2Q6UWI4 295 aa3.44□□□□□ -1.86
NEK9-208ENST00000555961 CCDC97Q96F63 343 aaPredicted RBP3.44□□□□□ -1.86
NEK9-208ENST00000555961 IFT43Q96FT9 208 aa3.44□□□□□ -1.86
NEK9-208ENST00000555961 MYO19Q96H55 970 aa3.44□□□□□ -1.86
NEK9-208ENST00000555961 FAM13BQ9NYF5 915 aa3.44□□□□□ -1.86
NEK9-208ENST00000555961 DMGDHQ9UI17 866 aaKnown RBP3.44□□□□□ -1.86
NEK9-208ENST00000555961 NAGPAQ9UK23 515 aa3.44□□□□□ -1.86
NEK9-208ENST00000555961 PAX4O43316 350 aa3.43□□□□□ -1.86
NEK9-208ENST00000555961 XYLBO75191 536 aa3.43□□□□□ -1.86
NEK9-208ENST00000555961 PPP1R15AO75807 674 aaPredicted RBP3.43□□□□□ -1.86
NEK9-208ENST00000555961 SASH3O75995 380 aa3.43□□□□□ -1.86
NEK9-208ENST00000555961 TARSP26639 723 aaKnown RBP3.43□□□□□ -1.86
NEK9-208ENST00000555961 WEE1P30291 646 aa3.43□□□□□ -1.86
NEK9-208ENST00000555961 PLAURQ03405 335 aa3.43□□□□□ -1.86
NEK9-208ENST00000555961 PERM1Q5SV97 790 aa3.43□□□□□ -1.86
NEK9-208ENST00000555961 ARTNQ5T4W7 220 aa3.43□□□□□ -1.86
NEK9-208ENST00000555961 FBXO11Q86XK2 927 aa3.43□□□□□ -1.86
NEK9-208ENST00000555961 TREML1Q86YW5 311 aa3.43□□□□□ -1.86
NEK9-208ENST00000555961 HOMEZQ8IX15 550 aa3.43□□□□□ -1.86
NEK9-208ENST00000555961 RGL4Q8IZJ4 473 aa3.43□□□□□ -1.86
NEK9-208ENST00000555961 CMTR1Q8N1G2 835 aaKnown RBP3.43□□□□□ -1.86
NEK9-208ENST00000555961 TRPM4Q8TD43 1214 aa3.43□□□□□ -1.86
NEK9-208ENST00000555961 TTC9Q92623 222 aa3.43□□□□□ -1.86
NEK9-208ENST00000555961 LPIN3Q9BQK8 851 aa3.43□□□□□ -1.86
NEK9-208ENST00000555961 SMG9Q9H0W8 520 aaKnown RBP3.43□□□□□ -1.86
NEK9-208ENST00000555961 QTRT2Q9H974 415 aaKnown RBP3.43□□□□□ -1.86
NEK9-208ENST00000555961 SRA1Q9HD15 236 aaKnown RBP3.43□□□□□ -1.86
NEK9-208ENST00000555961 BCS1LQ9Y276 419 aa3.43□□□□□ -1.86
NEK9-208ENST00000555961 RTCBQ9Y3I0 505 aaKnown RBP3.43□□□□□ -1.86
NEK9-208ENST00000555961 FAM177BA6PVY3 158 aa3.42□□□□□ -1.86
NEK9-208ENST00000555961 ITGB7P26010 798 aa3.42□□□□□ -1.86
NEK9-208ENST00000555961 IREB2P48200 963 aaKnown RBP3.42□□□□□ -1.86
NEK9-208ENST00000555961 LRP8Q14114 963 aa3.42□□□□□ -1.86
NEK9-208ENST00000555961 SWI5Q1ZZU3 235 aa3.42□□□□□ -1.86
NEK9-208ENST00000555961 IGF2-ASQ6U949 168 aa3.42□□□□□ -1.86
NEK9-208ENST00000555961 HFE2Q6ZVN8 426 aa3.42□□□□□ -1.86
NEK9-208ENST00000555961 MAP4K3Q8IVH8 894 aa3.42□□□□□ -1.86
NEK9-208ENST00000555961 CACTIN-AS1Q8N1I8 211 aa3.42□□□□□ -1.86
NEK9-208ENST00000555961 WFDC12Q8WWY7 111 aa3.42□□□□□ -1.86
NEK9-208ENST00000555961 PLD4Q96BZ4 506 aa3.42□□□□□ -1.86
NEK9-208ENST00000555961 TLR7Q9NYK1 1049 aaKnown RBP3.42□□□□□ -1.86
NEK9-208ENST00000555961 NOVA2Q9UNW9 492 aaKnown RBP3.42□□□□□ -1.86
NEK9-208ENST00000555961 LOC102724428A0A0B4J2F2 783 aa3.41□□□□□ -1.86
NEK9-208ENST00000555961 EGFRP00533 1210 aa3.41□□□□□ -1.86
NEK9-208ENST00000555961 BRD2P25440 801 aaKnown RBP3.41□□□□□ -1.86
Retrieved 100 of 20,778 RNA–protein pairs in 19.6 ms