RNA–Protein interactions for RNA: ENST00000555914.5

HNRNPC-222, Transcript of heterogeneous nuclear ribonucleoprotein C (C1/C2), human

APPRIS ALT1 TSL 5 BASIC

Gene HNRNPC, Length 1,658 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
HNRNPC-222	ENST00000555914	EPS15	P42566	896 aa		11.55	□□□□□ -0.56
HNRNPC-222	ENST00000555914	EIF6	P56537	245 aa	Known RBP	11.55	□□□□□ -0.56
HNRNPC-222	ENST00000555914	FMR1	Q06787	632 aa	Known RBP eCLIP	11.55	□□□□□ -0.56
HNRNPC-222	ENST00000555914	MBIP	Q9NS73	344 aa		11.55	□□□□□ -0.56
HNRNPC-222	ENST00000555914	ATP6V0A2	Q9Y487	856 aa		11.55	□□□□□ -0.56
HNRNPC-222	ENST00000555914	ATP5J2-PTCD1	G3V325	749 aa		11.54	□□□□□ -0.56
HNRNPC-222	ENST00000555914	PPIP5K2	O43314	1243 aa		11.54	□□□□□ -0.56
HNRNPC-222	ENST00000555914	HSP90AB3P	Q58FF7	597 aa		11.54	□□□□□ -0.56
HNRNPC-222	ENST00000555914	CNTROB	Q8N137	903 aa		11.54	□□□□□ -0.56
HNRNPC-222	ENST00000555914	CFAP44	Q96MT7	982 aa		11.54	□□□□□ -0.56
HNRNPC-222	ENST00000555914	SH3TC1	Q8TE82	1336 aa		11.54	□□□□□ -0.56
HNRNPC-222	ENST00000555914	COL4A1	P02462	1669 aa		11.54	□□□□□ -0.56
HNRNPC-222	ENST00000555914	DDX60	Q8IY21	1712 aa	Known RBP	11.53	□□□□□ -0.56
HNRNPC-222	ENST00000555914	APAF1	O14727	1248 aa		11.53	□□□□□ -0.56
HNRNPC-222	ENST00000555914	RTL5	Q5HYW3	569 aa	Predicted RBP	11.53	□□□□□ -0.56
HNRNPC-222	ENST00000555914	DUSP27	Q5VZP5	1158 aa		11.53	□□□□□ -0.56
HNRNPC-222	ENST00000555914	ANKRD13D	Q6ZTN6	518 aa		11.53	□□□□□ -0.56
HNRNPC-222	ENST00000555914	PNMA8A	Q86V59	439 aa	Predicted RBP	11.53	□□□□□ -0.56
HNRNPC-222	ENST00000555914	FAM89A	Q96GI7	184 aa		11.53	□□□□□ -0.56
HNRNPC-222	ENST00000555914	CNTNAP1	P78357	1384 aa		11.53	□□□□□ -0.56
HNRNPC-222	ENST00000555914	TMEM88B	A6NKF7	163 aa		11.52	□□□□□ -0.56
HNRNPC-222	ENST00000555914	ELL2	O00472	640 aa	Predicted RBP	11.52	□□□□□ -0.56
HNRNPC-222	ENST00000555914	ZNF853	P0CG23	659 aa		11.52	□□□□□ -0.56
HNRNPC-222	ENST00000555914	GRIPAP1	Q4V328	841 aa		11.52	□□□□□ -0.56
HNRNPC-222	ENST00000555914	POTEH	Q6S545	545 aa		11.52	□□□□□ -0.56
HNRNPC-222	ENST00000555914	PLBD2	Q8NHP8	589 aa		11.52	□□□□□ -0.56
HNRNPC-222	ENST00000555914	DBF4	Q9UBU7	674 aa	Predicted RBP	11.52	□□□□□ -0.56
HNRNPC-222	ENST00000555914	BBOX1	O75936	387 aa		11.52	□□□□□ -0.57
HNRNPC-222	ENST00000555914	HOXB7	P09629	217 aa		11.52	□□□□□ -0.57
HNRNPC-222	ENST00000555914	VEGFB	P49765	207 aa		11.52	□□□□□ -0.57
HNRNPC-222	ENST00000555914	SP8	Q8IXZ3	490 aa		11.52	□□□□□ -0.57
HNRNPC-222	ENST00000555914	NIM1K	Q8IY84	436 aa		11.52	□□□□□ -0.57
HNRNPC-222	ENST00000555914	ISCA1	Q9BUE6	129 aa		11.52	□□□□□ -0.57
HNRNPC-222	ENST00000555914	RTFDC1	Q9BY42	306 aa	Predicted RBP	11.52	□□□□□ -0.57
HNRNPC-222	ENST00000555914	PHAX	Q9H814	394 aa	Known RBP	11.52	□□□□□ -0.57
HNRNPC-222	ENST00000555914	ANP32A	P39687	249 aa	Known RBP	11.51	□□□□□ -0.57
HNRNPC-222	ENST00000555914	CXCL9	Q07325	125 aa		11.51	□□□□□ -0.57
HNRNPC-222	ENST00000555914	GRAP	Q13588	217 aa		11.51	□□□□□ -0.57
HNRNPC-222	ENST00000555914	DPP8	Q6V1X1	898 aa	Predicted RBP	11.51	□□□□□ -0.57
HNRNPC-222	ENST00000555914	DDX46	Q7L014	1031 aa	Known RBP	11.51	□□□□□ -0.57
HNRNPC-222	ENST00000555914	MPND	Q8N594	471 aa		11.51	□□□□□ -0.57
HNRNPC-222	ENST00000555914	GRAPL	Q8TC17	118 aa	Predicted RBP	11.51	□□□□□ -0.57
HNRNPC-222	ENST00000555914	CELF1	Q92879	486 aa	Known RBP	11.51	□□□□□ -0.57
HNRNPC-222	ENST00000555914	DUOX1	Q9NRD9	1551 aa		11.5	□□□□□ -0.57
HNRNPC-222	ENST00000555914	LMOD1	P29536	600 aa	Predicted RBP	11.5	□□□□□ -0.57
HNRNPC-222	ENST00000555914	TNS4	Q8IZW8	715 aa		11.5	□□□□□ -0.57
HNRNPC-222	ENST00000555914	CCDC136	Q96JN2	1154 aa		11.5	□□□□□ -0.57
HNRNPC-222	ENST00000555914	TMX4	Q9H1E5	349 aa	Predicted RBP	11.5	□□□□□ -0.57
HNRNPC-222	ENST00000555914	YDJC	A8MPS7	323 aa		11.49	□□□□□ -0.57
HNRNPC-222	ENST00000555914	TRAF5	O00463	557 aa		11.49	□□□□□ -0.57
HNRNPC-222	ENST00000555914	FOXN1	O15353	648 aa		11.49	□□□□□ -0.57
HNRNPC-222	ENST00000555914	CAPN15	O75808	1086 aa		11.49	□□□□□ -0.57
HNRNPC-222	ENST00000555914	RAD17	O75943	681 aa		11.49	□□□□□ -0.57
HNRNPC-222	ENST00000555914	RRP1	P56182	461 aa	Known RBP	11.49	□□□□□ -0.57
HNRNPC-222	ENST00000555914	KIAA2012	Q0VF49	1180 aa		11.49	□□□□□ -0.57
HNRNPC-222	ENST00000555914	C8orf58	Q8NAV2	365 aa		11.49	□□□□□ -0.57
HNRNPC-222	ENST00000555914	HYPK	Q9NX55	129 aa		11.49	□□□□□ -0.57
HNRNPC-222	ENST00000555914	GPRC5D	Q9NZD1	345 aa		11.49	□□□□□ -0.57
HNRNPC-222	ENST00000555914	ZNRF3	Q9ULT6	936 aa		11.49	□□□□□ -0.57
HNRNPC-222	ENST00000555914	NOP58	Q9Y2X3	529 aa	Known RBP	11.49	□□□□□ -0.57
HNRNPC-222	ENST00000555914	SHTN1	A0MZ66	631 aa		11.49	□□□□□ -0.57
HNRNPC-222	ENST00000555914	VPS33B	Q9H267	617 aa		11.49	□□□□□ -0.57
HNRNPC-222	ENST00000555914	IFT57	Q9NWB7	429 aa		11.49	□□□□□ -0.57
HNRNPC-222	ENST00000555914	LRRC37A	A6NMS7	1700 aa		11.48	□□□□□ -0.57
HNRNPC-222	ENST00000555914	RASSF10	A6NK89	507 aa		11.48	□□□□□ -0.57
HNRNPC-222	ENST00000555914	GMPS	P49915	693 aa	Predicted RBP	11.48	□□□□□ -0.57
HNRNPC-222	ENST00000555914	SF3B3	Q15393	1217 aa	Known RBP	11.48	□□□□□ -0.57
HNRNPC-222	ENST00000555914	CST9	Q5W186	159 aa		11.48	□□□□□ -0.57
HNRNPC-222	ENST00000555914	USP50	Q70EL3	339 aa	Predicted RBP	11.48	□□□□□ -0.57
HNRNPC-222	ENST00000555914	SUPT20H	Q8NEM7	779 aa		11.48	□□□□□ -0.57
HNRNPC-222	ENST00000555914	JARID2	Q92833	1246 aa	Predicted RBP	11.48	□□□□□ -0.57
HNRNPC-222	ENST00000555914	IRS4	O14654	1257 aa	Predicted RBP	11.47	□□□□□ -0.57
HNRNPC-222	ENST00000555914	HIRA	P54198	1017 aa	Predicted RBP	11.47	□□□□□ -0.57
HNRNPC-222	ENST00000555914	GNAI1	P63096	354 aa		11.47	□□□□□ -0.57
HNRNPC-222	ENST00000555914	TRIM28	Q13263	835 aa	Known RBP	11.47	□□□□□ -0.57
HNRNPC-222	ENST00000555914	DEFB115	Q30KQ5	88 aa		11.47	□□□□□ -0.57
HNRNPC-222	ENST00000555914	CIAPIN1	Q6FI81	312 aa		11.47	□□□□□ -0.57
HNRNPC-222	ENST00000555914	RIC3	Q7Z5B4	369 aa		11.47	□□□□□ -0.57
HNRNPC-222	ENST00000555914	TSPYL6	Q8N831	410 aa		11.47	□□□□□ -0.57
HNRNPC-222	ENST00000555914	GPR101	Q96P66	508 aa	Predicted RBP	11.47	□□□□□ -0.57
HNRNPC-222	ENST00000555914	SEC31B	Q9NQW1	1179 aa		11.47	□□□□□ -0.57
HNRNPC-222	ENST00000555914	POLL	Q9UGP5	575 aa		11.47	□□□□□ -0.57
HNRNPC-222	ENST00000555914	ABT1	Q9ULW3	272 aa	Known RBP	11.47	□□□□□ -0.57
HNRNPC-222	ENST00000555914	NSFL1C	Q9UNZ2	370 aa	Known RBP	11.47	□□□□□ -0.57
HNRNPC-222	ENST00000555914	GPSM2	P81274	684 aa		11.46	□□□□□ -0.57
HNRNPC-222	ENST00000555914	MYD88	Q99836	296 aa		11.46	□□□□□ -0.57
HNRNPC-222	ENST00000555914	DBNDD1	Q9H9R9	158 aa		11.46	□□□□□ -0.57
HNRNPC-222	ENST00000555914	KCNQ5	Q9NR82	932 aa		11.46	□□□□□ -0.57
HNRNPC-222	ENST00000555914	ADARB2	Q9NS39	739 aa	Known RBP	11.46	□□□□□ -0.57
HNRNPC-222	ENST00000555914	RCAN3	Q9UKA8	241 aa		11.46	□□□□□ -0.57
HNRNPC-222	ENST00000555914	ZBTB12	Q9Y330	459 aa	Predicted RBP	11.46	□□□□□ -0.57
HNRNPC-222	ENST00000555914	RIMBP2	O15034	1052 aa		11.46	□□□□□ -0.58
HNRNPC-222	ENST00000555914	WASHC4	Q2M389	1173 aa		11.46	□□□□□ -0.58
HNRNPC-222	ENST00000555914	ZBTB38	Q8NAP3	1195 aa	Predicted RBP	11.46	□□□□□ -0.58
HNRNPC-222	ENST00000555914	TRPM4	Q8TD43	1214 aa		11.46	□□□□□ -0.58
HNRNPC-222	ENST00000555914	TSR2	Q969E8	191 aa	Known RBP	11.46	□□□□□ -0.58
HNRNPC-222	ENST00000555914	WBP1L	Q9NX94	342 aa		11.46	□□□□□ -0.58
HNRNPC-222	ENST00000555914	WDR33	Q9C0J8	1336 aa	Known RBP	11.46	□□□□□ -0.58
HNRNPC-222	ENST00000555914	TRPM7	Q96QT4	1865 aa		11.45	□□□□□ -0.58
HNRNPC-222	ENST00000555914	GOLGA2	Q08379	1002 aa		11.45	□□□□□ -0.58

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