RNA–Protein interactions for RNA: ENST00000555617.5

ABCD4-222, Transcript of ATP binding cassette subfamily D member 4, humanhuman

TSL 4

Gene ABCD4, Length 542 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ABCD4-222ENST00000555617 HSP90AB1P08238 724 aaKnown RBP16.06■□□□□ 0.16
ABCD4-222ENST00000555617 ZNF530Q6P9A1 599 aaPredicted RBP16.06■□□□□ 0.16
ABCD4-222ENST00000555617 EFCC1Q9HA90 598 aa16.06■□□□□ 0.16
ABCD4-222ENST00000555617 BDP1A6H8Y1 2624 aa16.06■□□□□ 0.16
ABCD4-222ENST00000555617 YDJCA8MPS7 323 aa16.05■□□□□ 0.16
ABCD4-222ENST00000555617 LRIT3Q3SXY7 679 aa16.05■□□□□ 0.16
ABCD4-222ENST00000555617 SLC9C1Q4G0N8 1177 aa16.05■□□□□ 0.16
ABCD4-222ENST00000555617 SH3TC2Q8TF17 1288 aa16.05■□□□□ 0.16
ABCD4-222ENST00000555617 FAM161BQ96MY7 647 aa16.05■□□□□ 0.16
ABCD4-222ENST00000555617 GDF15Q99988 308 aa16.05■□□□□ 0.16
ABCD4-222ENST00000555617 LAMB1P07942 1786 aa16.05■□□□□ 0.16
ABCD4-222ENST00000555617 TAF1P21675 1872 aa16.04■□□□□ 0.16
ABCD4-222ENST00000555617 ST20-MTHFSA0A0A6YYL1 179 aa16.04■□□□□ 0.16
ABCD4-222ENST00000555617 TCERG1O14776 1098 aaKnown RBP16.04■□□□□ 0.16
ABCD4-222ENST00000555617 MTHFSP49914 203 aa16.04■□□□□ 0.16
ABCD4-222ENST00000555617 ALYREFQ86V81 257 aaKnown RBP16.04■□□□□ 0.16
ABCD4-222ENST00000555617 NBPF5PQ86XG9 351 aaPredicted RBP16.04■□□□□ 0.16
ABCD4-222ENST00000555617 DCPSQ96C86 337 aaKnown RBP16.04■□□□□ 0.16
ABCD4-222ENST00000555617 GGA3Q9NZ52 723 aa16.04■□□□□ 0.16
ABCD4-222ENST00000555617 ZNF330Q9Y3S2 320 aaPredicted RBP16.04■□□□□ 0.16
ABCD4-222ENST00000555617 NR2E3Q9Y5X4 410 aa16.04■□□□□ 0.16
ABCD4-222ENST00000555617 IRS2Q9Y4H2 1338 aa16.03■□□□□ 0.16
ABCD4-222ENST00000555617 ALDH1B1P30837 517 aa16.03■□□□□ 0.16
ABCD4-222ENST00000555617 RBM26Q5T8P6 1007 aaKnown RBP16.03■□□□□ 0.16
ABCD4-222ENST00000555617 ERO1AQ96HE7 468 aa16.03■□□□□ 0.16
ABCD4-222ENST00000555617 SCAF8Q9UPN6 1271 aaKnown RBP16.03■□□□□ 0.16
ABCD4-222ENST00000555617 A0A087WZG4 1122 aa16.02■□□□□ 0.16
ABCD4-222ENST00000555617 PRAMEF22A3QJZ6 481 aa16.02■□□□□ 0.16
ABCD4-222ENST00000555617 H7C1D1 291 aa16.02■□□□□ 0.16
ABCD4-222ENST00000555617 ABCC12Q96J65 1359 aa16.01■□□□□ 0.15
ABCD4-222ENST00000555617 IGF2BP3O00425 579 aaKnown RBP eCLIP16.01■□□□□ 0.15
ABCD4-222ENST00000555617 MTFR1Q15390 333 aa16.01■□□□□ 0.15
ABCD4-222ENST00000555617 CC2D2BQ6DHV5 1058 aa16.01■□□□□ 0.15
ABCD4-222ENST00000555617 SYMPKQ92797 1274 aaKnown RBP16.01■□□□□ 0.15
ABCD4-222ENST00000555617 BMP8BP34820 402 aa16■□□□□ 0.15
ABCD4-222ENST00000555617 SREBF2Q12772 1141 aa16■□□□□ 0.15
ABCD4-222ENST00000555617 MAFAQ8NHW3 353 aaPredicted RBP16■□□□□ 0.15
ABCD4-222ENST00000555617 HTATIP2Q9BUP3 242 aa16■□□□□ 0.15
ABCD4-222ENST00000555617 CRY2Q49AN0 593 aa15.99■□□□□ 0.15
ABCD4-222ENST00000555617 SSC5DA1L4H1 1573 aa15.99■□□□□ 0.15
ABCD4-222ENST00000555617 FAM177BA6PVY3 158 aa15.98■□□□□ 0.15
ABCD4-222ENST00000555617 POTEB2H3BUK9 544 aa15.98■□□□□ 0.15
ABCD4-222ENST00000555617 PPM1GO15355 546 aaPredicted RBP15.98■□□□□ 0.15
ABCD4-222ENST00000555617 ECM2O94769 699 aaPredicted RBP15.98■□□□□ 0.15
ABCD4-222ENST00000555617 PRAMEF18Q5VWM3 479 aa15.98■□□□□ 0.15
ABCD4-222ENST00000555617 SULF1Q8IWU6 871 aa15.98■□□□□ 0.15
ABCD4-222ENST00000555617 FKBP1BP68106 108 aa15.97■□□□□ 0.15
ABCD4-222ENST00000555617 CRHR2Q13324 411 aa15.97■□□□□ 0.15
ABCD4-222ENST00000555617 NBPF11Q86T75 865 aa15.97■□□□□ 0.15
ABCD4-222ENST00000555617 IFNL1Q8IU54 200 aa15.97■□□□□ 0.15
ABCD4-222ENST00000555617 RIC1Q4ADV7 1423 aa15.96■□□□□ 0.15
ABCD4-222ENST00000555617 WASHC2AQ641Q2 1341 aa15.95■□□□□ 0.14
ABCD4-222ENST00000555617 TNIP1Q15025 636 aa15.95■□□□□ 0.14
ABCD4-222ENST00000555617 DUOX1Q9NRD9 1551 aa15.95■□□□□ 0.14
ABCD4-222ENST00000555617 PSMD14O00487 310 aa15.94■□□□□ 0.14
ABCD4-222ENST00000555617 PPEF1O14829 653 aaPredicted RBP15.94■□□□□ 0.14
ABCD4-222ENST00000555617 EIF4A2Q14240 407 aaKnown RBP15.94■□□□□ 0.14
ABCD4-222ENST00000555617 KIF4BQ2VIQ3 1234 aa15.94■□□□□ 0.14
ABCD4-222ENST00000555617 PLEKHO1Q53GL0 409 aaPredicted RBP15.94■□□□□ 0.14
ABCD4-222ENST00000555617 DPF2Q92785 391 aa15.94■□□□□ 0.14
ABCD4-222ENST00000555617 SLC52A2Q9HAB3 445 aa15.94■□□□□ 0.14
ABCD4-222ENST00000555617 LGR6Q9HBX8 967 aa15.94■□□□□ 0.14
ABCD4-222ENST00000555617 SCN9AQ15858 1988 aa15.93■□□□□ 0.14
ABCD4-222ENST00000555617 ROCK2O75116 1388 aaKnown RBP15.93■□□□□ 0.14
ABCD4-222ENST00000555617 RAB3GAP2Q9H2M9 1393 aa15.93■□□□□ 0.14
ABCD4-222ENST00000555617 EVI5O60447 810 aa15.93■□□□□ 0.14
ABCD4-222ENST00000555617 ALDH1A1P00352 501 aa15.93■□□□□ 0.14
ABCD4-222ENST00000555617 SP3Q02447 781 aa15.93■□□□□ 0.14
ABCD4-222ENST00000555617 PTPN12Q05209 780 aaKnown RBP15.93■□□□□ 0.14
ABCD4-222ENST00000555617 TJAP1Q5JTD0 557 aa15.93■□□□□ 0.14
ABCD4-222ENST00000555617 SPRYD7Q5W111 196 aa15.93■□□□□ 0.14
ABCD4-222ENST00000555617 TDHQ8IZJ6 230 aa15.93■□□□□ 0.14
ABCD4-222ENST00000555617 ANGEL2Q5VTE6 544 aaKnown RBP15.92■□□□□ 0.14
ABCD4-222ENST00000555617 VSIG10Q8N0Z9 540 aa15.92■□□□□ 0.14
ABCD4-222ENST00000555617 CDX2Q99626 313 aaPredicted RBP15.92■□□□□ 0.14
ABCD4-222ENST00000555617 ZMYND8Q9ULU4 1186 aaPredicted RBP15.92■□□□□ 0.14
ABCD4-222ENST00000555617 COL2A1P02458 1487 aaPredicted RBP15.91■□□□□ 0.14
ABCD4-222ENST00000555617 A1BGP04217 495 aa15.91■□□□□ 0.14
ABCD4-222ENST00000555617 HOXA10P31260 410 aaPredicted RBP15.91■□□□□ 0.14
ABCD4-222ENST00000555617 IL6STP40189 918 aaPredicted RBP15.91■□□□□ 0.14
ABCD4-222ENST00000555617 PIP4K2AP48426 406 aaPredicted RBP15.91■□□□□ 0.14
ABCD4-222ENST00000555617 KIAA2012Q0VF49 1180 aa15.91■□□□□ 0.14
ABCD4-222ENST00000555617 NUTM1Q86Y26 1132 aa15.91■□□□□ 0.14
ABCD4-222ENST00000555617 RTFDC1Q9BY42 306 aaPredicted RBP15.91■□□□□ 0.14
ABCD4-222ENST00000555617 ARIH1Q9Y4X5 557 aaPredicted RBP15.91■□□□□ 0.14
ABCD4-222ENST00000555617 FARP2O94887 1054 aaPredicted RBP15.9■□□□□ 0.14
ABCD4-222ENST00000555617 GJA8P48165 433 aa15.9■□□□□ 0.14
ABCD4-222ENST00000555617 FAM109BQ6ICB4 259 aaPredicted RBP15.9■□□□□ 0.14
ABCD4-222ENST00000555617 C3orf67Q6ZVT6 689 aa15.9■□□□□ 0.14
ABCD4-222ENST00000555617 DZIP3Q86Y13 1208 aaKnown RBP15.9■□□□□ 0.14
ABCD4-222ENST00000555617 AEBP1Q8IUX7 1158 aa15.9■□□□□ 0.14
ABCD4-222ENST00000555617 KCNQ5Q9NR82 932 aa15.9■□□□□ 0.14
ABCD4-222ENST00000555617 CACNA1GO43497 2377 aa15.89■□□□□ 0.13
ABCD4-222ENST00000555617 GRIPAP1Q4V328 841 aa15.89■□□□□ 0.13
ABCD4-222ENST00000555617 C1orf141Q5JVX7 400 aa15.89■□□□□ 0.13
ABCD4-222ENST00000555617 TPTE2Q6XPS3 522 aa15.89■□□□□ 0.13
ABCD4-222ENST00000555617 USP38Q8NB14 1042 aa15.89■□□□□ 0.13
ABCD4-222ENST00000555617 ARHGAP39Q9C0H5 1083 aa15.89■□□□□ 0.13
ABCD4-222ENST00000555617 VPS33BQ9H267 617 aa15.89■□□□□ 0.13
ABCD4-222ENST00000555617 RTL9Q8NET4 1388 aa15.88■□□□□ 0.13
Retrieved 100 of 20,778 RNA–protein pairs in 11.6 ms