RNA–Protein interactions for RNA: ENST00000555616.5

ACTN1-215, Transcript of actinin alpha 1, humanhuman

TSL 3

Gene ACTN1, Length 919 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ACTN1-215ENST00000555616 COL4A1P02462 1669 aa12.29□□□□□ -0.44
ACTN1-215ENST00000555616 IRS4O14654 1257 aaPredicted RBP12.29□□□□□ -0.44
ACTN1-215ENST00000555616 BBOX1O75936 387 aa12.29□□□□□ -0.44
ACTN1-215ENST00000555616 SLC4A2P04920 1241 aa12.29□□□□□ -0.44
ACTN1-215ENST00000555616 IGKV5-2P06315 115 aa12.29□□□□□ -0.44
ACTN1-215ENST00000555616 HSP90B1P14625 803 aaKnown RBP12.29□□□□□ -0.44
ACTN1-215ENST00000555616 FLIIQ13045 1269 aa12.29□□□□□ -0.44
ACTN1-215ENST00000555616 DPY19L2Q6NUT2 758 aa12.29□□□□□ -0.44
ACTN1-215ENST00000555616 G2E3Q7L622 706 aa12.29□□□□□ -0.44
ACTN1-215ENST00000555616 TMC4Q7Z404 712 aa12.29□□□□□ -0.44
ACTN1-215ENST00000555616 RRAGCQ9HB90 399 aa12.29□□□□□ -0.44
ACTN1-215ENST00000555616 DUOX1Q9NRD9 1551 aa12.29□□□□□ -0.44
ACTN1-215ENST00000555616 VEGFAP15692 232 aaPredicted RBP12.28□□□□□ -0.44
ACTN1-215ENST00000555616 L3MBTL3Q96JM7 780 aaPredicted RBP12.28□□□□□ -0.44
ACTN1-215ENST00000555616 RTFDC1Q9BY42 306 aaPredicted RBP12.28□□□□□ -0.44
ACTN1-215ENST00000555616 CDHR2Q9BYE9 1310 aa12.28□□□□□ -0.44
ACTN1-215ENST00000555616 ZNF541Q9H0D2 1346 aa12.28□□□□□ -0.44
ACTN1-215ENST00000555616 POTECB2RU33 542 aa12.27□□□□□ -0.45
ACTN1-215ENST00000555616 FZD9O00144 591 aa12.27□□□□□ -0.45
ACTN1-215ENST00000555616 NEXNQ0ZGT2 675 aa12.27□□□□□ -0.45
ACTN1-215ENST00000555616 RTL5Q5HYW3 569 aaPredicted RBP12.27□□□□□ -0.45
ACTN1-215ENST00000555616 SP8Q8IXZ3 490 aa12.27□□□□□ -0.45
ACTN1-215ENST00000555616 C16orf71Q8IYS4 520 aaPredicted RBP12.27□□□□□ -0.45
ACTN1-215ENST00000555616 TMX4Q9H1E5 349 aaPredicted RBP12.27□□□□□ -0.45
ACTN1-215ENST00000555616 LTBP1Q14766 1721 aa12.26□□□□□ -0.45
ACTN1-215ENST00000555616 NEURL1BA8MQ27 555 aa12.26□□□□□ -0.45
ACTN1-215ENST00000555616 DDNO94850 711 aaPredicted RBP12.26□□□□□ -0.45
ACTN1-215ENST00000555616 CT47B1P0C2W7 299 aaPredicted RBP12.26□□□□□ -0.45
ACTN1-215ENST00000555616 FSTL1Q12841 308 aa12.26□□□□□ -0.45
ACTN1-215ENST00000555616 FKBP5Q13451 457 aaPredicted RBP12.26□□□□□ -0.45
ACTN1-215ENST00000555616 JDP2Q8WYK2 163 aa12.26□□□□□ -0.45
ACTN1-215ENST00000555616 CELF1Q92879 486 aaKnown RBP12.26□□□□□ -0.45
ACTN1-215ENST00000555616 VPS33BQ9H267 617 aa12.26□□□□□ -0.45
ACTN1-215ENST00000555616 PDE8AO60658 829 aa12.25□□□□□ -0.45
ACTN1-215ENST00000555616 APLP1P51693 650 aa12.25□□□□□ -0.45
ACTN1-215ENST00000555616 CWF19L2Q2TBE0 894 aaKnown RBP12.25□□□□□ -0.45
ACTN1-215ENST00000555616 DPP8Q6V1X1 898 aaPredicted RBP12.25□□□□□ -0.45
ACTN1-215ENST00000555616 LARGE2Q8N3Y3 721 aa12.25□□□□□ -0.45
ACTN1-215ENST00000555616 SMC1BQ8NDV3 1235 aa12.25□□□□□ -0.45
ACTN1-215ENST00000555616 SUPT20HQ8NEM7 779 aa12.25□□□□□ -0.45
ACTN1-215ENST00000555616 DNAAF4Q8WXU2 420 aa12.25□□□□□ -0.45
ACTN1-215ENST00000555616 IQCA1LA6NCM1 817 aa12.24□□□□□ -0.45
ACTN1-215ENST00000555616 PPIP5K2O43314 1243 aa12.24□□□□□ -0.45
ACTN1-215ENST00000555616 CACNA1FO60840 1977 aa12.24□□□□□ -0.45
ACTN1-215ENST00000555616 CTSWP56202 376 aa12.24□□□□□ -0.45
ACTN1-215ENST00000555616 CCDC152Q4G0S7 254 aa12.24□□□□□ -0.45
ACTN1-215ENST00000555616 GPC2Q8N158 579 aa12.24□□□□□ -0.45
ACTN1-215ENST00000555616 MPNDQ8N594 471 aa12.24□□□□□ -0.45
ACTN1-215ENST00000555616 RTL9Q8NET4 1388 aa12.24□□□□□ -0.45
ACTN1-215ENST00000555616 LINS1Q8NG48 757 aa12.24□□□□□ -0.45
ACTN1-215ENST00000555616 H7C1W4 665 aa12.23□□□□□ -0.45
ACTN1-215ENST00000555616 KIAA2012Q0VF49 1180 aa12.23□□□□□ -0.45
ACTN1-215ENST00000555616 GCKRQ14397 625 aa12.23□□□□□ -0.45
ACTN1-215ENST00000555616 AOC3Q16853 763 aa12.23□□□□□ -0.45
ACTN1-215ENST00000555616 UBE3BQ7Z3V4 1068 aa12.23□□□□□ -0.45
ACTN1-215ENST00000555616 NIM1KQ8IY84 436 aa12.23□□□□□ -0.45
ACTN1-215ENST00000555616 JARID2Q92833 1246 aaPredicted RBP12.23□□□□□ -0.45
ACTN1-215ENST00000555616 RCAN3Q9UKA8 241 aa12.23□□□□□ -0.45
ACTN1-215ENST00000555616 SCN4AP35499 1836 aa12.23□□□□□ -0.45
ACTN1-215ENST00000555616 CASP7P55210 303 aa12.22□□□□□ -0.45
ACTN1-215ENST00000555616 EIF6P56537 245 aaKnown RBP12.22□□□□□ -0.45
ACTN1-215ENST00000555616 RPS8P62241 208 aaKnown RBP12.22□□□□□ -0.45
ACTN1-215ENST00000555616 PLA2G12BQ9BX93 195 aa12.22□□□□□ -0.45
ACTN1-215ENST00000555616 TAF1DQ9H5J8 278 aaPredicted RBP12.22□□□□□ -0.45
ACTN1-215ENST00000555616 SEC31BQ9NQW1 1179 aa12.22□□□□□ -0.45
ACTN1-215ENST00000555616 TAF1P21675 1872 aa12.22□□□□□ -0.45
ACTN1-215ENST00000555616 ADAMTSL1Q8N6G6 1762 aa12.22□□□□□ -0.45
ACTN1-215ENST00000555616 BEND3Q5T5X7 828 aa12.21□□□□□ -0.45
ACTN1-215ENST00000555616 TTLL11Q8NHH1 800 aa12.21□□□□□ -0.45
ACTN1-215ENST00000555616 ZNRF3Q9ULT6 936 aa12.21□□□□□ -0.45
ACTN1-215ENST00000555616 F6X3S4 739 aa12.2□□□□□ -0.46
ACTN1-215ENST00000555616 GPSM2P81274 684 aa12.2□□□□□ -0.46
ACTN1-215ENST00000555616 DNAJC5GQ8N7S2 189 aa12.2□□□□□ -0.46
ACTN1-215ENST00000555616 CCDC85AQ96PX6 553 aaPredicted RBP12.2□□□□□ -0.46
ACTN1-215ENST00000555616 PODXL2Q9NZ53 605 aa12.2□□□□□ -0.46
ACTN1-215ENST00000555616 HACL1Q9UJ83 578 aa12.2□□□□□ -0.46
ACTN1-215ENST00000555616 NSFL1CQ9UNZ2 370 aaKnown RBP12.2□□□□□ -0.46
ACTN1-215ENST00000555616 POTEIP0CG38 1075 aa12.19□□□□□ -0.46
ACTN1-215ENST00000555616 POTEJP0CG39 1038 aa12.19□□□□□ -0.46
ACTN1-215ENST00000555616 EPHX2P34913 555 aa12.19□□□□□ -0.46
ACTN1-215ENST00000555616 SCNN1DP51172 638 aa12.19□□□□□ -0.46
ACTN1-215ENST00000555616 CHADLQ6NUI6 762 aa12.19□□□□□ -0.46
ACTN1-215ENST00000555616 LDHDQ86WU2 507 aa12.19□□□□□ -0.46
ACTN1-215ENST00000555616 ANKRD18AQ8IVF6 992 aa12.19□□□□□ -0.46
ACTN1-215ENST00000555616 TBC1D16Q8TBP0 767 aa12.19□□□□□ -0.46
ACTN1-215ENST00000555616 CDC5LQ99459 802 aaKnown RBP12.19□□□□□ -0.46
ACTN1-215ENST00000555616 GREM2Q9H772 168 aa12.19□□□□□ -0.46
ACTN1-215ENST00000555616 POLLQ9UGP5 575 aa12.19□□□□□ -0.46
ACTN1-215ENST00000555616 MYH3P11055 1940 aa12.19□□□□□ -0.46
ACTN1-215ENST00000555616 PTPRCP08575 1304 aa12.18□□□□□ -0.46
ACTN1-215ENST00000555616 CXCL9Q07325 125 aa12.18□□□□□ -0.46
ACTN1-215ENST00000555616 MRPL50Q8N5N7 158 aaKnown RBP12.18□□□□□ -0.46
ACTN1-215ENST00000555616 GJA3Q9Y6H8 435 aa12.18□□□□□ -0.46
ACTN1-215ENST00000555616 XDHP47989 1333 aa12.17□□□□□ -0.46
ACTN1-215ENST00000555616 YDJCA8MPS7 323 aa12.17□□□□□ -0.46
ACTN1-215ENST00000555616 GRM8O00222 908 aa12.17□□□□□ -0.46
ACTN1-215ENST00000555616 ALDH1L1O75891 902 aa12.17□□□□□ -0.46
ACTN1-215ENST00000555616 CSF1RP07333 972 aa12.17□□□□□ -0.46
ACTN1-215ENST00000555616 LMOD1P29536 600 aaPredicted RBP12.17□□□□□ -0.46
ACTN1-215ENST00000555616 RARSP54136 660 aaKnown RBP12.17□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 50.4 ms