RNA–Protein interactions for RNA: ENST00000555323.1

SYNE2-219, Transcript of spectrin repeat containing nuclear envelope protein 2, humanhuman

TSL 3

Gene SYNE2, Length 389 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE2-219ENST00000555323 ZBTB40Q9NUA8 1239 aa15.93■□□□□ 0.14
SYNE2-219ENST00000555323 RTL9Q8NET4 1388 aa15.92■□□□□ 0.14
SYNE2-219ENST00000555323 GNAI2P04899 355 aa15.92■□□□□ 0.14
SYNE2-219ENST00000555323 CHRNA5P30532 468 aa15.92■□□□□ 0.14
SYNE2-219ENST00000555323 CCDC152Q4G0S7 254 aa15.92■□□□□ 0.14
SYNE2-219ENST00000555323 ANKRD31Q8N7Z5 1873 aa15.92■□□□□ 0.14
SYNE2-219ENST00000555323 SRCAPQ6ZRS2 3230 aa15.91■□□□□ 0.14
SYNE2-219ENST00000555323 ALDH1B1P30837 517 aa15.91■□□□□ 0.14
SYNE2-219ENST00000555323 ANKRD44Q8N8A2 993 aa15.91■□□□□ 0.14
SYNE2-219ENST00000555323 NLGN2Q8NFZ4 835 aa15.91■□□□□ 0.14
SYNE2-219ENST00000555323 BICC1Q9H694 974 aaKnown RBP15.91■□□□□ 0.14
SYNE2-219ENST00000555323 PIM2Q9P1W9 311 aa15.91■□□□□ 0.14
SYNE2-219ENST00000555323 LRRFIP2Q9Y608 721 aaKnown RBP15.91■□□□□ 0.14
SYNE2-219ENST00000555323 DDX60Q8IY21 1712 aaKnown RBP15.91■□□□□ 0.14
SYNE2-219ENST00000555323 MTX1Q13505 466 aa15.9■□□□□ 0.14
SYNE2-219ENST00000555323 LMBR1LQ6UX01 489 aa15.9■□□□□ 0.14
SYNE2-219ENST00000555323 KLHL34Q8N239 644 aa15.9■□□□□ 0.14
SYNE2-219ENST00000555323 RPGRQ92834 1020 aaKnown RBP15.9■□□□□ 0.14
SYNE2-219ENST00000555323 CNKSR1Q969H4 720 aa15.9■□□□□ 0.14
SYNE2-219ENST00000555323 RBM17Q96I25 401 aaKnown RBP15.9■□□□□ 0.14
SYNE2-219ENST00000555323 GREM2Q9H772 168 aa15.9■□□□□ 0.14
SYNE2-219ENST00000555323 BBOX1O75936 387 aa15.89■□□□□ 0.13
SYNE2-219ENST00000555323 AAMPQ13685 434 aa15.89■□□□□ 0.13
SYNE2-219ENST00000555323 DDX46Q7L014 1031 aaKnown RBP15.89■□□□□ 0.13
SYNE2-219ENST00000555323 TNRC6CQ9HCJ0 1690 aaKnown RBP15.89■□□□□ 0.13
SYNE2-219ENST00000555323 GRAPQ13588 217 aa15.88■□□□□ 0.13
SYNE2-219ENST00000555323 TTLL6Q8N841 843 aa15.88■□□□□ 0.13
SYNE2-219ENST00000555323 GRAPLQ8TC17 118 aaPredicted RBP15.88■□□□□ 0.13
SYNE2-219ENST00000555323 ZNF622Q969S3 477 aaKnown RBP eCLIP15.88■□□□□ 0.13
SYNE2-219ENST00000555323 CRBNQ96SW2 442 aa15.88■□□□□ 0.13
SYNE2-219ENST00000555323 KIAA1551Q9HCM1 1747 aa15.88■□□□□ 0.13
SYNE2-219ENST00000555323 LAMB2P55268 1798 aa15.87■□□□□ 0.13
SYNE2-219ENST00000555323 ITGA6P23229 1130 aa15.87■□□□□ 0.13
SYNE2-219ENST00000555323 RPS8P62241 208 aaKnown RBP15.87■□□□□ 0.13
SYNE2-219ENST00000555323 ATP8B2P98198 1209 aa15.87■□□□□ 0.13
SYNE2-219ENST00000555323 C7orf43Q8WVR3 580 aa15.87■□□□□ 0.13
SYNE2-219ENST00000555323 SEC31BQ9NQW1 1179 aa15.87■□□□□ 0.13
SYNE2-219ENST00000555323 RFX5P48382 616 aaPredicted RBP15.86■□□□□ 0.13
SYNE2-219ENST00000555323 IFIT5Q13325 482 aaKnown RBP15.86■□□□□ 0.13
SYNE2-219ENST00000555323 CCDC57Q2TAC2 916 aa15.86■□□□□ 0.13
SYNE2-219ENST00000555323 FAM161AQ3B820 660 aa15.86■□□□□ 0.13
SYNE2-219ENST00000555323 DALRD3Q5D0E6 543 aaKnown RBP15.86■□□□□ 0.13
SYNE2-219ENST00000555323 RPAP2Q8IXW5 612 aaPredicted RBP15.86■□□□□ 0.13
SYNE2-219ENST00000555323 CELF1Q92879 486 aaKnown RBP15.86■□□□□ 0.13
SYNE2-219ENST00000555323 CCDC85AQ96PX6 553 aaPredicted RBP15.86■□□□□ 0.13
SYNE2-219ENST00000555323 CDC5LQ99459 802 aaKnown RBP15.86■□□□□ 0.13
SYNE2-219ENST00000555323 ANKRD18BA2A2Z9 1011 aa15.85■□□□□ 0.13
SYNE2-219ENST00000555323 TMC4Q7Z404 712 aa15.85■□□□□ 0.13
SYNE2-219ENST00000555323 POLA2Q14181 598 aa15.84■□□□□ 0.13
SYNE2-219ENST00000555323 PRPF40BQ6NWY9 871 aaKnown RBP15.84■□□□□ 0.13
SYNE2-219ENST00000555323 CEP85Q6P2H3 762 aa15.84■□□□□ 0.13
SYNE2-219ENST00000555323 ANKRD18AQ8IVF6 992 aa15.84■□□□□ 0.13
SYNE2-219ENST00000555323 SP8Q8IXZ3 490 aa15.84■□□□□ 0.13
SYNE2-219ENST00000555323 C1orf115Q9H7X2 142 aa15.84■□□□□ 0.13
SYNE2-219ENST00000555323 BSDC1Q9NW68 430 aaPredicted RBP15.84■□□□□ 0.13
SYNE2-219ENST00000555323 COL11A2P13942 1736 aaPredicted RBP15.83■□□□□ 0.13
SYNE2-219ENST00000555323 PNMA6EA0A0J9YXQ4 647 aa15.83■□□□□ 0.12
SYNE2-219ENST00000555323 PTPN12Q05209 780 aaKnown RBP15.83■□□□□ 0.12
SYNE2-219ENST00000555323 CC2D2BQ6DHV5 1058 aa15.83■□□□□ 0.12
SYNE2-219ENST00000555323 SSH3Q8TE77 659 aa15.83■□□□□ 0.12
SYNE2-219ENST00000555323 COPRSQ9NQ92 184 aa15.83■□□□□ 0.12
SYNE2-219ENST00000555323 FBXO3Q9UK99 471 aa15.83■□□□□ 0.12
SYNE2-219ENST00000555323 CHMP3Q9Y3E7 222 aa15.83■□□□□ 0.12
SYNE2-219ENST00000555323 ATP6V0A2Q9Y487 856 aa15.83■□□□□ 0.12
SYNE2-219ENST00000555323 MYH3P11055 1940 aa15.83■□□□□ 0.12
SYNE2-219ENST00000555323 DLEC1Q9Y238 1755 aa15.82■□□□□ 0.12
SYNE2-219ENST00000555323 SRGAP3O43295 1099 aa15.82■□□□□ 0.12
SYNE2-219ENST00000555323 IGHMBP2P38935 993 aaKnown RBP15.82■□□□□ 0.12
SYNE2-219ENST00000555323 GRIPAP1Q4V328 841 aa15.82■□□□□ 0.12
SYNE2-219ENST00000555323 SIRT2Q8IXJ6 389 aa15.82■□□□□ 0.12
SYNE2-219ENST00000555323 EXOC6Q8TAG9 804 aa15.82■□□□□ 0.12
SYNE2-219ENST00000555323 BCS1LQ9Y276 419 aa15.82■□□□□ 0.12
SYNE2-219ENST00000555323 PPEF1O14829 653 aaPredicted RBP15.81■□□□□ 0.12
SYNE2-219ENST00000555323 BRCA1P38398 1863 aaKnown RBP15.81■□□□□ 0.12
SYNE2-219ENST00000555323 ZNF594Q96JF6 807 aaPredicted RBP15.81■□□□□ 0.12
SYNE2-219ENST00000555323 SOGA3Q5TF21 947 aa15.8■□□□□ 0.12
SYNE2-219ENST00000555323 LDHAL6AQ6ZMR3 332 aa15.8■□□□□ 0.12
SYNE2-219ENST00000555323 MPHOSPH8Q99549 860 aa15.8■□□□□ 0.12
SYNE2-219ENST00000555323 MINPP1Q9UNW1 487 aa15.8■□□□□ 0.12
SYNE2-219ENST00000555323 RIPOR2Q9Y4F9 1068 aa15.8■□□□□ 0.12
SYNE2-219ENST00000555323 PCDHB15Q9Y5E8 787 aa15.8■□□□□ 0.12
SYNE2-219ENST00000555323 C21orf2O43822 256 aa15.79■□□□□ 0.12
SYNE2-219ENST00000555323 CIAO1O76071 339 aa15.79■□□□□ 0.12
SYNE2-219ENST00000555323 YBX3P16989 372 aaKnown RBP eCLIP15.79■□□□□ 0.12
SYNE2-219ENST00000555323 TAF7LQ5H9L4 462 aa15.79■□□□□ 0.12
SYNE2-219ENST00000555323 NOP58Q9Y2X3 529 aaKnown RBP15.79■□□□□ 0.12
SYNE2-219ENST00000555323 SLX4Q8IY92 1834 aa15.79■□□□□ 0.12
SYNE2-219ENST00000555323 COL4A1P02462 1669 aa15.79■□□□□ 0.12
SYNE2-219ENST00000555323 SNED1Q8TER0 1413 aa15.78■□□□□ 0.12
SYNE2-219ENST00000555323 EYA2O00167 538 aa15.78■□□□□ 0.12
SYNE2-219ENST00000555323 HMMRO75330 724 aa15.78■□□□□ 0.12
SYNE2-219ENST00000555323 IRX6P78412 446 aaPredicted RBP15.78■□□□□ 0.12
SYNE2-219ENST00000555323 RTKN2Q8IZC4 609 aa15.78■□□□□ 0.12
SYNE2-219ENST00000555323 KLHDC4Q8TBB5 520 aa15.78■□□□□ 0.12
SYNE2-219ENST00000555323 PUS3Q9BZE2 481 aaKnown RBP15.78■□□□□ 0.12
SYNE2-219ENST00000555323 TMX4Q9H1E5 349 aaPredicted RBP15.78■□□□□ 0.12
SYNE2-219ENST00000555323 PODXL2Q9NZ53 605 aa15.78■□□□□ 0.12
SYNE2-219ENST00000555323 CCDC93Q567U6 631 aa15.77■□□□□ 0.12
SYNE2-219ENST00000555323 ATG9AQ7Z3C6 839 aa15.77■□□□□ 0.12
SYNE2-219ENST00000555323 RTFDC1Q9BY42 306 aaPredicted RBP15.77■□□□□ 0.12
Retrieved 100 of 20,778 RNA–protein pairs in 28.7 ms