RNA–Protein interactions for RNA: ENST00000555046.1

TMEM260-206, Transcript of transmembrane protein 260, humanhuman

TSL 3

Gene TMEM260, Length 618 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM260-206ENST00000555046 CCDC24Q8N4L8 307 aa13.42□□□□□ -0.26
TMEM260-206ENST00000555046 RBM17Q96I25 401 aaKnown RBP13.42□□□□□ -0.26
TMEM260-206ENST00000555046 CREBZFQ9NS37 354 aa13.42□□□□□ -0.26
TMEM260-206ENST00000555046 HDAC5Q9UQL6 1122 aa13.42□□□□□ -0.26
TMEM260-206ENST00000555046 TIAM2Q8IVF5 1701 aa13.42□□□□□ -0.26
TMEM260-206ENST00000555046 KIF16BQ96L93 1317 aa13.41□□□□□ -0.26
TMEM260-206ENST00000555046 NEURL1BA8MQ27 555 aa13.41□□□□□ -0.26
TMEM260-206ENST00000555046 IRS4O14654 1257 aaPredicted RBP13.41□□□□□ -0.26
TMEM260-206ENST00000555046 CRY2Q49AN0 593 aa13.41□□□□□ -0.26
TMEM260-206ENST00000555046 GRIPAP1Q4V328 841 aa13.41□□□□□ -0.26
TMEM260-206ENST00000555046 SLC4A10Q6U841 1118 aa13.41□□□□□ -0.26
TMEM260-206ENST00000555046 FAM89AQ96GI7 184 aa13.41□□□□□ -0.26
TMEM260-206ENST00000555046 SRCIN1Q9C0H9 1055 aa13.41□□□□□ -0.26
TMEM260-206ENST00000555046 C4AP0C0L4 1744 aa13.4□□□□□ -0.26
TMEM260-206ENST00000555046 HOXA10P31260 410 aaPredicted RBP13.4□□□□□ -0.26
TMEM260-206ENST00000555046 GCKRQ14397 625 aa13.4□□□□□ -0.26
TMEM260-206ENST00000555046 BEND3Q5T5X7 828 aa13.4□□□□□ -0.26
TMEM260-206ENST00000555046 CRAMP1Q96RY5 1269 aa13.4□□□□□ -0.26
TMEM260-206ENST00000555046 BCL2L13Q9BXK5 485 aa13.4□□□□□ -0.26
TMEM260-206ENST00000555046 WBP1LQ9NX94 342 aa13.4□□□□□ -0.26
TMEM260-206ENST00000555046 NOB1Q9ULX3 412 aaKnown RBP13.4□□□□□ -0.26
TMEM260-206ENST00000555046 CUL9Q8IWT3 2517 aa13.4□□□□□ -0.26
TMEM260-206ENST00000555046 H7C1W4 665 aa13.39□□□□□ -0.27
TMEM260-206ENST00000555046 PDE8AO60658 829 aa13.39□□□□□ -0.27
TMEM260-206ENST00000555046 BBOX1O75936 387 aa13.39□□□□□ -0.27
TMEM260-206ENST00000555046 IGKV5-2P06315 115 aa13.39□□□□□ -0.27
TMEM260-206ENST00000555046 HCLS1P14317 486 aaPredicted RBP13.39□□□□□ -0.27
TMEM260-206ENST00000555046 SF3B3Q15393 1217 aaKnown RBP13.39□□□□□ -0.27
TMEM260-206ENST00000555046 CC2D2BQ6DHV5 1058 aa13.39□□□□□ -0.27
TMEM260-206ENST00000555046 DDX46Q7L014 1031 aaKnown RBP13.39□□□□□ -0.27
TMEM260-206ENST00000555046 C9orf78Q9NZ63 289 aaPredicted RBP13.39□□□□□ -0.27
TMEM260-206ENST00000555046 RNF181Q9P0P0 153 aa13.39□□□□□ -0.27
TMEM260-206ENST00000555046 F6X3S4 739 aa13.38□□□□□ -0.27
TMEM260-206ENST00000555046 CCT4P50991 539 aaKnown RBP13.38□□□□□ -0.27
TMEM260-206ENST00000555046 CWF19L2Q2TBE0 894 aaKnown RBP13.38□□□□□ -0.27
TMEM260-206ENST00000555046 RIC1Q4ADV7 1423 aa13.38□□□□□ -0.27
TMEM260-206ENST00000555046 CDHR2Q9BYE9 1310 aa13.38□□□□□ -0.27
TMEM260-206ENST00000555046 MS4A1P11836 297 aa13.37□□□□□ -0.27
TMEM260-206ENST00000555046 CCDC152Q4G0S7 254 aa13.37□□□□□ -0.27
TMEM260-206ENST00000555046 RTL5Q5HYW3 569 aaPredicted RBP13.37□□□□□ -0.27
TMEM260-206ENST00000555046 TMC4Q7Z404 712 aa13.37□□□□□ -0.27
TMEM260-206ENST00000555046 RTKN2Q8IZC4 609 aa13.37□□□□□ -0.27
TMEM260-206ENST00000555046 PRPF38BQ5VTL8 546 aaKnown RBP13.36□□□□□ -0.27
TMEM260-206ENST00000555046 ZKSCAN2Q63HK3 967 aa13.36□□□□□ -0.27
TMEM260-206ENST00000555046 PRPF40BQ6NWY9 871 aaKnown RBP13.36□□□□□ -0.27
TMEM260-206ENST00000555046 FRAT1Q92837 279 aaPredicted RBP13.36□□□□□ -0.27
TMEM260-206ENST00000555046 SCN7AQ01118 1682 aa13.36□□□□□ -0.27
TMEM260-206ENST00000555046 THSD7BQ9C0I4 1608 aa13.35□□□□□ -0.27
TMEM260-206ENST00000555046 GRM8O00222 908 aa13.35□□□□□ -0.27
TMEM260-206ENST00000555046 ATF7IPQ6VMQ6 1270 aa13.35□□□□□ -0.27
TMEM260-206ENST00000555046 UBE3BQ7Z3V4 1068 aa13.35□□□□□ -0.27
TMEM260-206ENST00000555046 SYNE4Q8N205 404 aa13.35□□□□□ -0.27
TMEM260-206ENST00000555046 YTHDC1Q96MU7 727 aaKnown RBP13.35□□□□□ -0.27
TMEM260-206ENST00000555046 PLA2G12BQ9BX93 195 aa13.35□□□□□ -0.27
TMEM260-206ENST00000555046 CCDC88AQ3V6T2 1871 aa13.34□□□□□ -0.27
TMEM260-206ENST00000555046 C21orf2O43822 256 aa13.34□□□□□ -0.27
TMEM260-206ENST00000555046 BCAR3O75815 825 aa13.34□□□□□ -0.27
TMEM260-206ENST00000555046 VEGFBP49765 207 aa13.34□□□□□ -0.27
TMEM260-206ENST00000555046 GRAPQ13588 217 aa13.34□□□□□ -0.27
TMEM260-206ENST00000555046 CCDC93Q567U6 631 aa13.34□□□□□ -0.27
TMEM260-206ENST00000555046 GOLGA6L2Q8N9W4 650 aaPredicted RBP13.34□□□□□ -0.27
TMEM260-206ENST00000555046 GRAPLQ8TC17 118 aaPredicted RBP13.34□□□□□ -0.27
TMEM260-206ENST00000555046 CDC5LQ99459 802 aaKnown RBP13.34□□□□□ -0.27
TMEM260-206ENST00000555046 RCAN3Q9UKA8 241 aa13.34□□□□□ -0.27
TMEM260-206ENST00000555046 ABCC12Q96J65 1359 aa13.33□□□□□ -0.27
TMEM260-206ENST00000555046 VEGFAP15692 232 aaPredicted RBP13.33□□□□□ -0.28
TMEM260-206ENST00000555046 RPS8P62241 208 aaKnown RBP13.33□□□□□ -0.28
TMEM260-206ENST00000555046 PPEF1O14829 653 aaPredicted RBP13.32□□□□□ -0.28
TMEM260-206ENST00000555046 CTSWP56202 376 aa13.32□□□□□ -0.28
TMEM260-206ENST00000555046 INTS3Q68E01 1043 aaKnown RBP13.32□□□□□ -0.28
TMEM260-206ENST00000555046 SP8Q8IXZ3 490 aa13.32□□□□□ -0.28
TMEM260-206ENST00000555046 FTSJ3Q8IY81 847 aaKnown RBP13.32□□□□□ -0.28
TMEM260-206ENST00000555046 TTLL11Q8NHH1 800 aa13.32□□□□□ -0.28
TMEM260-206ENST00000555046 C7orf43Q8WVR3 580 aa13.32□□□□□ -0.28
TMEM260-206ENST00000555046 ATP6V0A2Q9Y487 856 aa13.32□□□□□ -0.28
TMEM260-206ENST00000555046 BCORQ6W2J9 1755 aa13.32□□□□□ -0.28
TMEM260-206ENST00000555046 LTBP1Q14766 1721 aa13.31□□□□□ -0.28
TMEM260-206ENST00000555046 NRXN2Q9P2S2 1712 aa13.31□□□□□ -0.28
TMEM260-206ENST00000555046 CSF1RP07333 972 aa13.31□□□□□ -0.28
TMEM260-206ENST00000555046 GNAI3P08754 354 aa13.31□□□□□ -0.28
TMEM260-206ENST00000555046 CASP7P55210 303 aa13.31□□□□□ -0.28
TMEM260-206ENST00000555046 C3orf67Q6ZVT6 689 aa13.31□□□□□ -0.28
TMEM260-206ENST00000555046 ANKRD18AQ8IVF6 992 aa13.31□□□□□ -0.28
TMEM260-206ENST00000555046 SUPT20HQ8NEM7 779 aa13.31□□□□□ -0.28
TMEM260-206ENST00000555046 JARID2Q92833 1246 aaPredicted RBP13.31□□□□□ -0.28
TMEM260-206ENST00000555046 VPS33BQ9H267 617 aa13.31□□□□□ -0.28
TMEM260-206ENST00000555046 CHMP4BQ9H444 224 aaKnown RBP13.31□□□□□ -0.28
TMEM260-206ENST00000555046 UTYO14607 1347 aa13.31□□□□□ -0.28
TMEM260-206ENST00000555046 ZC3H4Q9UPT8 1303 aaKnown RBP13.31□□□□□ -0.28
TMEM260-206ENST00000555046 NUP98P52948 1817 aa13.3□□□□□ -0.28
TMEM260-206ENST00000555046 TRIM27P14373 513 aa13.3□□□□□ -0.28
TMEM260-206ENST00000555046 LMNB1P20700 586 aa13.3□□□□□ -0.28
TMEM260-206ENST00000555046 IGHMBP2P38935 993 aaKnown RBP13.3□□□□□ -0.28
TMEM260-206ENST00000555046 IFIT5Q13325 482 aaKnown RBP13.3□□□□□ -0.28
TMEM260-206ENST00000555046 CCDC57Q2TAC2 916 aa13.3□□□□□ -0.28
TMEM260-206ENST00000555046 DZIP1LQ8IYY4 767 aaKnown RBP13.3□□□□□ -0.28
TMEM260-206ENST00000555046 USP44Q9H0E7 712 aa13.3□□□□□ -0.28
TMEM260-206ENST00000555046 TAOK3Q9H2K8 898 aa13.3□□□□□ -0.28
TMEM260-206ENST00000555046 ZNF219Q9P2Y4 722 aaPredicted RBP13.3□□□□□ -0.28
TMEM260-206ENST00000555046 CACNA1FO60840 1977 aa13.3□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 52.3 ms