RNA–Protein interactions for RNA: ENST00000554928.1

SYNE2-214, Transcript of spectrin repeat containing nuclear envelope protein 2, humanhuman

TSL 3

Gene SYNE2, Length 1,048 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE2-214ENST00000554928 UBE3BQ7Z3V4 1068 aa15.73■□□□□ 0.11
SYNE2-214ENST00000554928 SEC31BQ9NQW1 1179 aa15.73■□□□□ 0.11
SYNE2-214ENST00000554928 NOB1Q9ULX3 412 aaKnown RBP15.73■□□□□ 0.11
SYNE2-214ENST00000554928 TNNQ9UQP3 1299 aa15.73■□□□□ 0.11
SYNE2-214ENST00000554928 CHD4Q14839 1912 aa15.72■□□□□ 0.11
SYNE2-214ENST00000554928 CDHR2Q9BYE9 1310 aa15.72■□□□□ 0.11
SYNE2-214ENST00000554928 PPEF1O14829 653 aaPredicted RBP15.72■□□□□ 0.11
SYNE2-214ENST00000554928 BCAR3O75815 825 aa15.72■□□□□ 0.11
SYNE2-214ENST00000554928 CT47B1P0C2W7 299 aaPredicted RBP15.72■□□□□ 0.11
SYNE2-214ENST00000554928 ALDH1B1P30837 517 aa15.72■□□□□ 0.11
SYNE2-214ENST00000554928 CELF1Q92879 486 aaKnown RBP15.72■□□□□ 0.11
SYNE2-214ENST00000554928 CACNA1FO60840 1977 aa15.72■□□□□ 0.11
SYNE2-214ENST00000554928 TAF1P21675 1872 aa15.71■□□□□ 0.11
SYNE2-214ENST00000554928 ZNF784Q8NCA9 323 aaPredicted RBP15.71■□□□□ 0.11
SYNE2-214ENST00000554928 RNF181Q9P0P0 153 aa15.71■□□□□ 0.11
SYNE2-214ENST00000554928 PTPRCP08575 1304 aa15.7■□□□□ 0.1
SYNE2-214ENST00000554928 PDE8AO60658 829 aa15.7■□□□□ 0.1
SYNE2-214ENST00000554928 GRAPQ13588 217 aa15.7■□□□□ 0.1
SYNE2-214ENST00000554928 CCDC93Q567U6 631 aa15.7■□□□□ 0.1
SYNE2-214ENST00000554928 EPHA10Q5JZY3 1008 aa15.7■□□□□ 0.1
SYNE2-214ENST00000554928 DDX46Q7L014 1031 aaKnown RBP15.7■□□□□ 0.1
SYNE2-214ENST00000554928 GRAPLQ8TC17 118 aaPredicted RBP15.7■□□□□ 0.1
SYNE2-214ENST00000554928 CTSWP56202 376 aa15.69■□□□□ 0.1
SYNE2-214ENST00000554928 SRCIN1Q9C0H9 1055 aa15.69■□□□□ 0.1
SYNE2-214ENST00000554928 FER1L6Q2WGJ9 1857 aa15.68■□□□□ 0.1
SYNE2-214ENST00000554928 BRPF1P55201 1214 aaPredicted RBP15.68■□□□□ 0.1
SYNE2-214ENST00000554928 TTLL11Q8NHH1 800 aa15.68■□□□□ 0.1
SYNE2-214ENST00000554928 ZNF526Q8TF50 670 aaPredicted RBP15.68■□□□□ 0.1
SYNE2-214ENST00000554928 TAOK3Q9H2K8 898 aa15.68■□□□□ 0.1
SYNE2-214ENST00000554928 GREM2Q9H772 168 aa15.68■□□□□ 0.1
SYNE2-214ENST00000554928 ZNF277Q9NRM2 450 aaPredicted RBP15.68■□□□□ 0.1
SYNE2-214ENST00000554928 ATP6V0A2Q9Y487 856 aa15.68■□□□□ 0.1
SYNE2-214ENST00000554928 GRM8O00222 908 aa15.67■□□□□ 0.1
SYNE2-214ENST00000554928 ALDH1L1O75891 902 aa15.67■□□□□ 0.1
SYNE2-214ENST00000554928 NBPF7P0C2Y1 421 aaPredicted RBP15.67■□□□□ 0.1
SYNE2-214ENST00000554928 LMNB1P20700 586 aa15.67■□□□□ 0.1
SYNE2-214ENST00000554928 FOXO4P98177 505 aa15.67■□□□□ 0.1
SYNE2-214ENST00000554928 FKBP4Q02790 459 aaKnown RBP eCLIP15.67■□□□□ 0.1
SYNE2-214ENST00000554928 KAZALD1Q96I82 304 aa15.67■□□□□ 0.1
SYNE2-214ENST00000554928 PLA2G12BQ9BX93 195 aa15.67■□□□□ 0.1
SYNE2-214ENST00000554928 LTBP3Q9NS15 1303 aa15.67■□□□□ 0.1
SYNE2-214ENST00000554928 COL4A5P29400 1685 aa15.67■□□□□ 0.1
SYNE2-214ENST00000554928 SBF1O95248 1867 aa15.66■□□□□ 0.1
SYNE2-214ENST00000554928 BBOX1O75936 387 aa15.66■□□□□ 0.1
SYNE2-214ENST00000554928 FAM161AQ3B820 660 aa15.66■□□□□ 0.1
SYNE2-214ENST00000554928 CCDC152Q4G0S7 254 aa15.66■□□□□ 0.1
SYNE2-214ENST00000554928 SOGA3Q5TF21 947 aa15.66■□□□□ 0.1
SYNE2-214ENST00000554928 SUCLG2Q96I99 432 aa15.66■□□□□ 0.1
SYNE2-214ENST00000554928 SP8Q8IXZ3 490 aa15.65■□□□□ 0.1
SYNE2-214ENST00000554928 RTKN2Q8IZC4 609 aa15.65■□□□□ 0.1
SYNE2-214ENST00000554928 YTHDC1Q96MU7 727 aaKnown RBP15.65■□□□□ 0.1
SYNE2-214ENST00000554928 CSF1RP07333 972 aa15.64■□□□□ 0.09
SYNE2-214ENST00000554928 RPS8P62241 208 aaKnown RBP15.64■□□□□ 0.09
SYNE2-214ENST00000554928 FRAT1Q92837 279 aaPredicted RBP15.64■□□□□ 0.09
SYNE2-214ENST00000554928 USP44Q9H0E7 712 aa15.64■□□□□ 0.09
SYNE2-214ENST00000554928 C9orf78Q9NZ63 289 aaPredicted RBP15.64■□□□□ 0.09
SYNE2-214ENST00000554928 UTYO14607 1347 aa15.64■□□□□ 0.09
SYNE2-214ENST00000554928 DUOX1Q9NRD9 1551 aa15.63■□□□□ 0.09
SYNE2-214ENST00000554928 WTIPA6NIX2 430 aaPredicted RBP15.63■□□□□ 0.09
SYNE2-214ENST00000554928 TRIM27P14373 513 aa15.63■□□□□ 0.09
SYNE2-214ENST00000554928 GPSM2P81274 684 aa15.63■□□□□ 0.09
SYNE2-214ENST00000554928 CC2D2BQ6DHV5 1058 aa15.63■□□□□ 0.09
SYNE2-214ENST00000554928 GPR101Q96P66 508 aaPredicted RBP15.63■□□□□ 0.09
SYNE2-214ENST00000554928 PSMD1Q99460 953 aa15.63■□□□□ 0.09
SYNE2-214ENST00000554928 API5Q9BZZ5 524 aaKnown RBP15.63■□□□□ 0.09
SYNE2-214ENST00000554928 HSP90B1P14625 803 aaKnown RBP15.62■□□□□ 0.09
SYNE2-214ENST00000554928 ITGA6P23229 1130 aa15.62■□□□□ 0.09
SYNE2-214ENST00000554928 IARSP41252 1262 aaKnown RBP15.62■□□□□ 0.09
SYNE2-214ENST00000554928 LMBR1LQ6UX01 489 aa15.62■□□□□ 0.09
SYNE2-214ENST00000554928 CLUAP1Q96AJ1 413 aa15.62■□□□□ 0.09
SYNE2-214ENST00000554928 LRRC37AA6NMS7 1700 aa15.62■□□□□ 0.09
SYNE2-214ENST00000554928 KIF16BQ96L93 1317 aa15.62■□□□□ 0.09
SYNE2-214ENST00000554928 RTL9Q8NET4 1388 aa15.62■□□□□ 0.09
SYNE2-214ENST00000554928 ABCB7O75027 752 aa15.61■□□□□ 0.09
SYNE2-214ENST00000554928 DPP8Q6V1X1 898 aaPredicted RBP15.61■□□□□ 0.09
SYNE2-214ENST00000554928 ANKRD18AQ8IVF6 992 aa15.61■□□□□ 0.09
SYNE2-214ENST00000554928 MPNDQ8N594 471 aa15.61■□□□□ 0.09
SYNE2-214ENST00000554928 ANKRD44Q8N8A2 993 aa15.61■□□□□ 0.09
SYNE2-214ENST00000554928 ARHGAP45Q92619 1136 aa15.61■□□□□ 0.09
SYNE2-214ENST00000554928 RTFDC1Q9BY42 306 aaPredicted RBP15.61■□□□□ 0.09
SYNE2-214ENST00000554928 FOXD4L1Q9NU39 408 aa15.61■□□□□ 0.09
SYNE2-214ENST00000554928 POLLQ9UGP5 575 aa15.61■□□□□ 0.09
SYNE2-214ENST00000554928 CCDC88AQ3V6T2 1871 aa15.61■□□□□ 0.09
SYNE2-214ENST00000554928 TIAM2Q8IVF5 1701 aa15.6■□□□□ 0.09
SYNE2-214ENST00000554928 AOC3Q16853 763 aa15.6■□□□□ 0.09
SYNE2-214ENST00000554928 ATF7IPQ6VMQ6 1270 aa15.6■□□□□ 0.09
SYNE2-214ENST00000554928 ZNF594Q96JF6 807 aaPredicted RBP15.6■□□□□ 0.09
SYNE2-214ENST00000554928 BICC1Q9H694 974 aaKnown RBP15.6■□□□□ 0.09
SYNE2-214ENST00000554928 NMRK2Q9NPI5 230 aa15.6■□□□□ 0.09
SYNE2-214ENST00000554928 NSFL1CQ9UNZ2 370 aaKnown RBP15.6■□□□□ 0.09
SYNE2-214ENST00000554928 CHMP3Q9Y3E7 222 aa15.6■□□□□ 0.09
SYNE2-214ENST00000554928 ZNF541Q9H0D2 1346 aa15.6■□□□□ 0.09
SYNE2-214ENST00000554928 RLBP1P12271 317 aa15.59■□□□□ 0.09
SYNE2-214ENST00000554928 CCT4P50991 539 aaKnown RBP15.59■□□□□ 0.09
SYNE2-214ENST00000554928 INTS3Q68E01 1043 aaKnown RBP15.59■□□□□ 0.09
SYNE2-214ENST00000554928 MEIS3Q99687 375 aa15.59■□□□□ 0.09
SYNE2-214ENST00000554928 LTBP1Q14766 1721 aa15.59■□□□□ 0.09
SYNE2-214ENST00000554928 MYH3P11055 1940 aa15.58■□□□□ 0.09
SYNE2-214ENST00000554928 PPIP5K2O43314 1243 aa15.58■□□□□ 0.08
SYNE2-214ENST00000554928 TMC4Q7Z404 712 aa15.58■□□□□ 0.08
Retrieved 100 of 20,778 RNA–protein pairs in 17.4 ms