RNA–Protein interactions for RNA: ENST00000554808.1

LINC01397-201, Transcript of long intergenic non-protein coding RNA 1397, humanhuman

TSL 4 BASIC

Gene LINC01397, Length 579 nt, Biotype antisense RNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01397-201ENST00000554808 CTSWP56202 376 aa10.1□□□□□ -0.79
LINC01397-201ENST00000554808 SF3B3Q15393 1217 aaKnown RBP10.1□□□□□ -0.79
LINC01397-201ENST00000554808 CCDC152Q4G0S7 254 aa10.1□□□□□ -0.79
LINC01397-201ENST00000554808 KLHL34Q8N239 644 aa10.1□□□□□ -0.79
LINC01397-201ENST00000554808 RPGRQ92834 1020 aaKnown RBP10.1□□□□□ -0.79
LINC01397-201ENST00000554808 SUPT16HQ9Y5B9 1047 aaKnown RBP10.1□□□□□ -0.79
LINC01397-201ENST00000554808 ARAP2Q8WZ64 1704 aa10.1□□□□□ -0.79
LINC01397-201ENST00000554808 PSME4Q14997 1843 aa10.1□□□□□ -0.79
LINC01397-201ENST00000554808 PLIN1O60240 522 aa10.09□□□□□ -0.79
LINC01397-201ENST00000554808 GNAI2P04899 355 aa10.09□□□□□ -0.79
LINC01397-201ENST00000554808 RLBP1P12271 317 aa10.09□□□□□ -0.79
LINC01397-201ENST00000554808 GPR162Q16538 588 aa10.09□□□□□ -0.79
LINC01397-201ENST00000554808 STYK1Q6J9G0 422 aa10.09□□□□□ -0.79
LINC01397-201ENST00000554808 TMC4Q7Z404 712 aa10.09□□□□□ -0.79
LINC01397-201ENST00000554808 PANK1Q8TE04 598 aa10.09□□□□□ -0.79
LINC01397-201ENST00000554808 MASTLQ96GX5 879 aa10.09□□□□□ -0.79
LINC01397-201ENST00000554808 RBM17Q96I25 401 aaKnown RBP10.09□□□□□ -0.79
LINC01397-201ENST00000554808 LTBP1Q14766 1721 aa10.09□□□□□ -0.79
LINC01397-201ENST00000554808 ZBTB7BO15156 539 aaPredicted RBP10.08□□□□□ -0.8
LINC01397-201ENST00000554808 NBPF7P0C2Y1 421 aaPredicted RBP10.08□□□□□ -0.8
LINC01397-201ENST00000554808 SRGNP10124 158 aa10.08□□□□□ -0.8
LINC01397-201ENST00000554808 YBX3P16989 372 aaKnown RBP eCLIP10.08□□□□□ -0.8
LINC01397-201ENST00000554808 RABL6Q3YEC7 729 aaPredicted RBP10.08□□□□□ -0.8
LINC01397-201ENST00000554808 DDX46Q7L014 1031 aaKnown RBP10.08□□□□□ -0.8
LINC01397-201ENST00000554808 CNKSR1Q969H4 720 aa10.08□□□□□ -0.8
LINC01397-201ENST00000554808 CRAMP1Q96RY5 1269 aa10.08□□□□□ -0.8
LINC01397-201ENST00000554808 CDC5LQ99459 802 aaKnown RBP10.08□□□□□ -0.8
LINC01397-201ENST00000554808 MEIS3Q99687 375 aa10.08□□□□□ -0.8
LINC01397-201ENST00000554808 COG6Q9Y2V7 657 aa10.08□□□□□ -0.8
LINC01397-201ENST00000554808 CSF1RP07333 972 aa10.07□□□□□ -0.8
LINC01397-201ENST00000554808 HCLS1P14317 486 aaPredicted RBP10.07□□□□□ -0.8
LINC01397-201ENST00000554808 HOXA10P31260 410 aaPredicted RBP10.07□□□□□ -0.8
LINC01397-201ENST00000554808 MTX1Q13505 466 aa10.07□□□□□ -0.8
LINC01397-201ENST00000554808 GRIPAP1Q4V328 841 aa10.07□□□□□ -0.8
LINC01397-201ENST00000554808 RTL5Q5HYW3 569 aaPredicted RBP10.07□□□□□ -0.8
LINC01397-201ENST00000554808 SOGA3Q5TF21 947 aa10.07□□□□□ -0.8
LINC01397-201ENST00000554808 C2CD5Q86YS7 1000 aa10.07□□□□□ -0.8
LINC01397-201ENST00000554808 PELP1Q8IZL8 1130 aaKnown RBP10.07□□□□□ -0.8
LINC01397-201ENST00000554808 TTLL11Q8NHH1 800 aa10.07□□□□□ -0.8
LINC01397-201ENST00000554808 SUCLG2Q96I99 432 aa10.07□□□□□ -0.8
LINC01397-201ENST00000554808 PIM2Q9P1W9 311 aa10.07□□□□□ -0.8
LINC01397-201ENST00000554808 FBXO3Q9UK99 471 aa10.07□□□□□ -0.8
LINC01397-201ENST00000554808 TNNQ9UQP3 1299 aa10.07□□□□□ -0.8
LINC01397-201ENST00000554808 ANKRD18BA2A2Z9 1011 aa10.06□□□□□ -0.8
LINC01397-201ENST00000554808 NEFLP07196 543 aa10.06□□□□□ -0.8
LINC01397-201ENST00000554808 IFIT5Q13325 482 aaKnown RBP10.06□□□□□ -0.8
LINC01397-201ENST00000554808 GRAPQ13588 217 aa10.06□□□□□ -0.8
LINC01397-201ENST00000554808 CCDC57Q2TAC2 916 aa10.06□□□□□ -0.8
LINC01397-201ENST00000554808 TTLL6Q8N841 843 aa10.06□□□□□ -0.8
LINC01397-201ENST00000554808 GRAPLQ8TC17 118 aaPredicted RBP10.06□□□□□ -0.8
LINC01397-201ENST00000554808 TMX4Q9H1E5 349 aaPredicted RBP10.06□□□□□ -0.8
LINC01397-201ENST00000554808 BICC1Q9H694 974 aaKnown RBP10.06□□□□□ -0.8
LINC01397-201ENST00000554808 ZBTB40Q9NUA8 1239 aa10.06□□□□□ -0.8
LINC01397-201ENST00000554808 TIAM2Q8IVF5 1701 aa10.05□□□□□ -0.8
LINC01397-201ENST00000554808 HMMRO75330 724 aa10.05□□□□□ -0.8
LINC01397-201ENST00000554808 BBOX1O75936 387 aa10.05□□□□□ -0.8
LINC01397-201ENST00000554808 IGHMBP2P38935 993 aaKnown RBP10.05□□□□□ -0.8
LINC01397-201ENST00000554808 FOXO4P98177 505 aa10.05□□□□□ -0.8
LINC01397-201ENST00000554808 C20orf194Q5TEA3 1177 aa10.05□□□□□ -0.8
LINC01397-201ENST00000554808 CC2D2BQ6DHV5 1058 aa10.05□□□□□ -0.8
LINC01397-201ENST00000554808 LMBR1LQ6UX01 489 aa10.05□□□□□ -0.8
LINC01397-201ENST00000554808 ANKRD18AQ8IVF6 992 aa10.05□□□□□ -0.8
LINC01397-201ENST00000554808 RPAP2Q8IXW5 612 aaPredicted RBP10.05□□□□□ -0.8
LINC01397-201ENST00000554808 SYNE4Q8N205 404 aa10.05□□□□□ -0.8
LINC01397-201ENST00000554808 LRRFIP2Q9Y608 721 aaKnown RBP10.05□□□□□ -0.8
LINC01397-201ENST00000554808 AK9Q5TCS8 1911 aa10.05□□□□□ -0.8
LINC01397-201ENST00000554808 DPEP1P16444 411 aa10.04□□□□□ -0.8
LINC01397-201ENST00000554808 ITGA6P23229 1130 aa10.04□□□□□ -0.8
LINC01397-201ENST00000554808 DALRD3Q5D0E6 543 aaKnown RBP10.04□□□□□ -0.8
LINC01397-201ENST00000554808 TAF7LQ5H9L4 462 aa10.04□□□□□ -0.8
LINC01397-201ENST00000554808 CCDC24Q8N4L8 307 aa10.04□□□□□ -0.8
LINC01397-201ENST00000554808 ZNF622Q969S3 477 aaKnown RBP eCLIP10.04□□□□□ -0.8
LINC01397-201ENST00000554808 MPHOSPH8Q99549 860 aa10.04□□□□□ -0.8
LINC01397-201ENST00000554808 CHMP3Q9Y3E7 222 aa10.04□□□□□ -0.8
LINC01397-201ENST00000554808 A0A0G2JLW4 131 aa10.03□□□□□ -0.8
LINC01397-201ENST00000554808 KCNA3P22001 575 aa10.03□□□□□ -0.8
LINC01397-201ENST00000554808 CHRNA5P30532 468 aa10.03□□□□□ -0.8
LINC01397-201ENST00000554808 RPS8P62241 208 aaKnown RBP10.03□□□□□ -0.8
LINC01397-201ENST00000554808 FAM161AQ3B820 660 aa10.03□□□□□ -0.8
LINC01397-201ENST00000554808 ERICH6BQ5W0A0 696 aa10.03□□□□□ -0.8
LINC01397-201ENST00000554808 PRPF40BQ6NWY9 871 aaKnown RBP10.03□□□□□ -0.8
LINC01397-201ENST00000554808 ANKRD44Q8N8A2 993 aa10.03□□□□□ -0.8
LINC01397-201ENST00000554808 JARID2Q92833 1246 aaPredicted RBP10.03□□□□□ -0.8
LINC01397-201ENST00000554808 KAZALD1Q96I82 304 aa10.03□□□□□ -0.8
LINC01397-201ENST00000554808 GREM2Q9H772 168 aa10.03□□□□□ -0.8
LINC01397-201ENST00000554808 BSDC1Q9NW68 430 aaPredicted RBP10.03□□□□□ -0.8
LINC01397-201ENST00000554808 MYH7P12883 1935 aa10.03□□□□□ -0.8
LINC01397-201ENST00000554808 PPEF1O14829 653 aaPredicted RBP10.02□□□□□ -0.81
LINC01397-201ENST00000554808 SRGAP3O43295 1099 aa10.02□□□□□ -0.81
LINC01397-201ENST00000554808 ATP8B2P98198 1209 aa10.02□□□□□ -0.81
LINC01397-201ENST00000554808 HSP90AB4PQ58FF6 505 aa10.02□□□□□ -0.81
LINC01397-201ENST00000554808 EPHA10Q5JZY3 1008 aa10.02□□□□□ -0.81
LINC01397-201ENST00000554808 IFFO2Q5TF58 517 aa10.02□□□□□ -0.81
LINC01397-201ENST00000554808 CEP85Q6P2H3 762 aa10.02□□□□□ -0.81
LINC01397-201ENST00000554808 SSH3Q8TE77 659 aa10.02□□□□□ -0.81
LINC01397-201ENST00000554808 CRBNQ96SW2 442 aa10.02□□□□□ -0.81
LINC01397-201ENST00000554808 CIAO1O76071 339 aa10.01□□□□□ -0.81
LINC01397-201ENST00000554808 POLA2Q14181 598 aa10.01□□□□□ -0.81
LINC01397-201ENST00000554808 CCDC93Q567U6 631 aa10.01□□□□□ -0.81
LINC01397-201ENST00000554808 C3orf67Q6ZVT6 689 aa10.01□□□□□ -0.81
Retrieved 100 of 20,778 RNA–protein pairs in 12.5 ms