RNA–Protein interactions for RNA: ENST00000554756.1

RIPK3-204, Transcript of receptor interacting serine/threonine kinase 3, humanhuman

TSL 1 (best)

Gene RIPK3, Length 1,758 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RIPK3-204ENST00000554756 HSP90B1P14625 803 aaKnown RBP15.25■□□□□ 0.03
RIPK3-204ENST00000554756 CASP7P55210 303 aa15.25■□□□□ 0.03
RIPK3-204ENST00000554756 ZKSCAN2Q63HK3 967 aa15.25■□□□□ 0.03
RIPK3-204ENST00000554756 ATF7IPQ6VMQ6 1270 aa15.25■□□□□ 0.03
RIPK3-204ENST00000554756 CENPQQ7L2Z9 268 aaPredicted RBP15.25■□□□□ 0.03
RIPK3-204ENST00000554756 GRIN3BO60391 1043 aa15.24■□□□□ 0.03
RIPK3-204ENST00000554756 ALDH1B1P30837 517 aa15.24■□□□□ 0.03
RIPK3-204ENST00000554756 HOXA10P31260 410 aaPredicted RBP15.24■□□□□ 0.03
RIPK3-204ENST00000554756 SF3B3Q15393 1217 aaKnown RBP15.24■□□□□ 0.03
RIPK3-204ENST00000554756 ARHGAP27Q6ZUM4 889 aa15.24■□□□□ 0.03
RIPK3-204ENST00000554756 CCT4P50991 539 aaKnown RBP15.24■□□□□ 0.03
RIPK3-204ENST00000554756 DDX46Q7L014 1031 aaKnown RBP15.24■□□□□ 0.03
RIPK3-204ENST00000554756 CRAMP1Q96RY5 1269 aa15.24■□□□□ 0.03
RIPK3-204ENST00000554756 CTSWP56202 376 aa15.23■□□□□ 0.03
RIPK3-204ENST00000554756 ABCC4O15439 1325 aa15.23■□□□□ 0.03
RIPK3-204ENST00000554756 KDM2BQ8NHM5 1336 aa15.23■□□□□ 0.03
RIPK3-204ENST00000554756 NBPF7P0C2Y1 421 aaPredicted RBP15.22■□□□□ 0.03
RIPK3-204ENST00000554756 OLFM4Q6UX06 510 aa15.22■□□□□ 0.03
RIPK3-204ENST00000554756 SLC51AQ86UW1 340 aa15.22■□□□□ 0.03
RIPK3-204ENST00000554756 DDX60Q8IY21 1712 aaKnown RBP15.22■□□□□ 0.03
RIPK3-204ENST00000554756 DLEC1Q9Y238 1755 aa15.22■□□□□ 0.03
RIPK3-204ENST00000554756 CCDC152Q4G0S7 254 aa15.21■□□□□ 0.03
RIPK3-204ENST00000554756 C20orf194Q5TEA3 1177 aa15.21■□□□□ 0.03
RIPK3-204ENST00000554756 SUCLG2Q96I99 432 aa15.21■□□□□ 0.03
RIPK3-204ENST00000554756 USP44Q9H0E7 712 aa15.21■□□□□ 0.03
RIPK3-204ENST00000554756 SEC31BQ9NQW1 1179 aa15.21■□□□□ 0.03
RIPK3-204ENST00000554756 PPEF1O14829 653 aaPredicted RBP15.21■□□□□ 0.02
RIPK3-204ENST00000554756 GRAPQ13588 217 aa15.21■□□□□ 0.02
RIPK3-204ENST00000554756 EPHA10Q5JZY3 1008 aa15.21■□□□□ 0.02
RIPK3-204ENST00000554756 TTLL11Q8NHH1 800 aa15.21■□□□□ 0.02
RIPK3-204ENST00000554756 GRAPLQ8TC17 118 aaPredicted RBP15.21■□□□□ 0.02
RIPK3-204ENST00000554756 CELF1Q92879 486 aaKnown RBP15.21■□□□□ 0.02
RIPK3-204ENST00000554756 PLA2G12BQ9BX93 195 aa15.21■□□□□ 0.02
RIPK3-204ENST00000554756 BRCA1P38398 1863 aaKnown RBP15.2■□□□□ 0.02
RIPK3-204ENST00000554756 FOXO4P98177 505 aa15.2■□□□□ 0.02
RIPK3-204ENST00000554756 INTS3Q68E01 1043 aaKnown RBP15.2■□□□□ 0.02
RIPK3-204ENST00000554756 TMEM57Q8N5G2 664 aa15.2■□□□□ 0.02
RIPK3-204ENST00000554756 C7orf43Q8WVR3 580 aa15.2■□□□□ 0.02
RIPK3-204ENST00000554756 GREM2Q9H772 168 aa15.2■□□□□ 0.02
RIPK3-204ENST00000554756 UTYO14607 1347 aa15.19■□□□□ 0.02
RIPK3-204ENST00000554756 RASSF7Q02833 373 aa15.19■□□□□ 0.02
RIPK3-204ENST00000554756 FTSJ3Q8IY81 847 aaKnown RBP15.19■□□□□ 0.02
RIPK3-204ENST00000554756 DZIP1LQ8IYY4 767 aaKnown RBP15.19■□□□□ 0.02
RIPK3-204ENST00000554756 CHMP3Q9Y3E7 222 aa15.19■□□□□ 0.02
RIPK3-204ENST00000554756 BBOX1O75936 387 aa15.19■□□□□ 0.02
RIPK3-204ENST00000554756 RLBP1P12271 317 aa15.19■□□□□ 0.02
RIPK3-204ENST00000554756 LMBR1LQ6UX01 489 aa15.19■□□□□ 0.02
RIPK3-204ENST00000554756 LAMB2P55268 1798 aa15.19■□□□□ 0.02
RIPK3-204ENST00000554756 SLX4Q8IY92 1834 aa15.18■□□□□ 0.02
RIPK3-204ENST00000554756 CSF1RP07333 972 aa15.18■□□□□ 0.02
RIPK3-204ENST00000554756 FAM161AQ3B820 660 aa15.18■□□□□ 0.02
RIPK3-204ENST00000554756 CCDC93Q567U6 631 aa15.18■□□□□ 0.02
RIPK3-204ENST00000554756 PANK1Q8TE04 598 aa15.18■□□□□ 0.02
RIPK3-204ENST00000554756 KAZALD1Q96I82 304 aa15.18■□□□□ 0.02
RIPK3-204ENST00000554756 MEIS3Q99687 375 aa15.18■□□□□ 0.02
RIPK3-204ENST00000554756 UBTFL1P0CB47 393 aaPredicted RBP15.17■□□□□ 0.02
RIPK3-204ENST00000554756 RPS8P62241 208 aaKnown RBP15.17■□□□□ 0.02
RIPK3-204ENST00000554756 SOGA3Q5TF21 947 aa15.17■□□□□ 0.02
RIPK3-204ENST00000554756 ATP6V0A2Q9Y487 856 aa15.17■□□□□ 0.02
RIPK3-204ENST00000554756 NFKBIEO00221 500 aa15.16■□□□□ 0.02
RIPK3-204ENST00000554756 ITGA6P23229 1130 aa15.16■□□□□ 0.02
RIPK3-204ENST00000554756 ANKRD18AQ8IVF6 992 aa15.16■□□□□ 0.02
RIPK3-204ENST00000554756 ANP32EQ9BTT0 268 aa15.16■□□□□ 0.02
RIPK3-204ENST00000554756 TMX4Q9H1E5 349 aaPredicted RBP15.16■□□□□ 0.02
RIPK3-204ENST00000554756 BICC1Q9H694 974 aaKnown RBP15.16■□□□□ 0.02
RIPK3-204ENST00000554756 COL4A1P02462 1669 aa15.16■□□□□ 0.02
RIPK3-204ENST00000554756 ITPRIPQ8IWB1 547 aa15.16■□□□□ 0.02
RIPK3-204ENST00000554756 SP8Q8IXZ3 490 aa15.16■□□□□ 0.02
RIPK3-204ENST00000554756 CDC5LQ99459 802 aaKnown RBP15.16■□□□□ 0.02
RIPK3-204ENST00000554756 CACNA1SQ13698 1873 aa15.15■□□□□ 0.02
RIPK3-204ENST00000554756 ANKRD18BA2A2Z9 1011 aa15.15■□□□□ 0.02
RIPK3-204ENST00000554756 ANP32AP39687 249 aaKnown RBP15.15■□□□□ 0.02
RIPK3-204ENST00000554756 RTKN2Q8IZC4 609 aa15.15■□□□□ 0.02
RIPK3-204ENST00000554756 ANKRD44Q8N8A2 993 aa15.15■□□□□ 0.02
RIPK3-204ENST00000554756 PRELPP51888 382 aa15.14■□□□□ 0.01
RIPK3-204ENST00000554756 IFIT5Q13325 482 aaKnown RBP15.14■□□□□ 0.01
RIPK3-204ENST00000554756 CC2D2BQ6DHV5 1058 aa15.14■□□□□ 0.01
RIPK3-204ENST00000554756 TAOK3Q9H2K8 898 aa15.14■□□□□ 0.01
RIPK3-204ENST00000554756 LRRFIP2Q9Y608 721 aaKnown RBP15.14■□□□□ 0.01
RIPK3-204ENST00000554756 ARFGEF1Q9Y6D6 1849 aa15.14■□□□□ 0.01
RIPK3-204ENST00000554756 RTL9Q8NET4 1388 aa15.14■□□□□ 0.01
RIPK3-204ENST00000554756 GNAI3P08754 354 aa15.13■□□□□ 0.01
RIPK3-204ENST00000554756 TMC4Q7Z404 712 aa15.13■□□□□ 0.01
RIPK3-204ENST00000554756 IGHMBP2P38935 993 aaKnown RBP15.13■□□□□ 0.01
RIPK3-204ENST00000554756 FKBP4Q02790 459 aaKnown RBP eCLIP15.13■□□□□ 0.01
RIPK3-204ENST00000554756 CCDC57Q2TAC2 916 aa15.13■□□□□ 0.01
RIPK3-204ENST00000554756 C9orf131Q5VYM1 1079 aa15.13■□□□□ 0.01
RIPK3-204ENST00000554756 MPNDQ8N594 471 aa15.13■□□□□ 0.01
RIPK3-204ENST00000554756 ZNF594Q96JF6 807 aaPredicted RBP15.13■□□□□ 0.01
RIPK3-204ENST00000554756 ZNF277Q9NRM2 450 aaPredicted RBP15.13■□□□□ 0.01
RIPK3-204ENST00000554756 RNF181Q9P0P0 153 aa15.13■□□□□ 0.01
RIPK3-204ENST00000554756 TAF1P21675 1872 aa15.12■□□□□ 0.01
RIPK3-204ENST00000554756 GPSM2P81274 684 aa15.12■□□□□ 0.01
RIPK3-204ENST00000554756 RABL6Q3YEC7 729 aaPredicted RBP15.12■□□□□ 0.01
RIPK3-204ENST00000554756 TAF7LQ5H9L4 462 aa15.12■□□□□ 0.01
RIPK3-204ENST00000554756 BACH2Q9BYV9 841 aa15.12■□□□□ 0.01
RIPK3-204ENST00000554756 COG6Q9Y2V7 657 aa15.12■□□□□ 0.01
RIPK3-204ENST00000554756 LMNB1P20700 586 aa15.11■□□□□ 0.01
RIPK3-204ENST00000554756 DPP8Q6V1X1 898 aaPredicted RBP15.11■□□□□ 0.01
RIPK3-204ENST00000554756 MPHOSPH8Q99549 860 aa15.11■□□□□ 0.01
Retrieved 100 of 20,778 RNA–protein pairs in 23 ms