RNA–Protein interactions for RNA: ENST00000554178.1

PTPN21-204, Transcript of protein tyrosine phosphatase, non-receptor type 21, human

TSL 3

Gene PTPN21, Length 822 nt, Biotype processed transcript.

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
PTPN21-204	ENST00000554178	PPIP5K2	O43314	1243 aa		12.92	□□□□□ -0.34
PTPN21-204	ENST00000554178	CLCN6	P51797	869 aa		12.92	□□□□□ -0.34
PTPN21-204	ENST00000554178	LHX8	Q68G74	356 aa		12.92	□□□□□ -0.34
PTPN21-204	ENST00000554178	KIF6	Q6ZMV9	814 aa		12.92	□□□□□ -0.34
PTPN21-204	ENST00000554178	NIM1K	Q8IY84	436 aa		12.92	□□□□□ -0.34
PTPN21-204	ENST00000554178	SCN9A	Q15858	1988 aa		12.91	□□□□□ -0.34
PTPN21-204	ENST00000554178	SLC34A2	O95436	690 aa		12.91	□□□□□ -0.34
PTPN21-204	ENST00000554178	PPP2R1A	P30153	589 aa		12.91	□□□□□ -0.34
PTPN21-204	ENST00000554178	SUSD4	Q5VX71	490 aa		12.91	□□□□□ -0.34
PTPN21-204	ENST00000554178	CST9	Q5W186	159 aa		12.91	□□□□□ -0.34
PTPN21-204	ENST00000554178	BEGAIN	Q9BUH8	593 aa		12.91	□□□□□ -0.34
PTPN21-204	ENST00000554178	NYX	Q9GZU5	481 aa		12.91	□□□□□ -0.34
PTPN21-204	ENST00000554178	NUDC	Q9Y266	331 aa		12.91	□□□□□ -0.34
PTPN21-204	ENST00000554178	PDE4DIP	Q5VU43	2346 aa		12.9	□□□□□ -0.34
PTPN21-204	ENST00000554178	NTSR2	O95665	410 aa		12.9	□□□□□ -0.34
PTPN21-204	ENST00000554178	GPR101	Q96P66	508 aa	Predicted RBP	12.9	□□□□□ -0.34
PTPN21-204	ENST00000554178	DCBLD2	Q96PD2	775 aa		12.9	□□□□□ -0.34
PTPN21-204	ENST00000554178	GLIS2	Q9BZE0	524 aa	Predicted RBP	12.9	□□□□□ -0.34
PTPN21-204	ENST00000554178	IBTK	Q9P2D0	1353 aa	Predicted RBP	12.9	□□□□□ -0.34
PTPN21-204	ENST00000554178	SHTN1	A0MZ66	631 aa		12.89	□□□□□ -0.35
PTPN21-204	ENST00000554178	CELF2	O95319	508 aa	Known RBP	12.89	□□□□□ -0.35
PTPN21-204	ENST00000554178	ANXA1	P04083	346 aa		12.89	□□□□□ -0.35
PTPN21-204	ENST00000554178	ECE1	P42892	770 aa		12.89	□□□□□ -0.35
PTPN21-204	ENST00000554178	TAF7	Q15545	349 aa	Predicted RBP	12.89	□□□□□ -0.35
PTPN21-204	ENST00000554178	TLL2	Q9Y6L7	1015 aa		12.89	□□□□□ -0.35
PTPN21-204	ENST00000554178	ABCC4	O15439	1325 aa		12.88	□□□□□ -0.35
PTPN21-204	ENST00000554178	GMPS	P49915	693 aa	Predicted RBP	12.88	□□□□□ -0.35
PTPN21-204	ENST00000554178	MLLT1	Q03111	559 aa	Predicted RBP	12.88	□□□□□ -0.35
PTPN21-204	ENST00000554178	DLK2	Q6UY11	383 aa		12.88	□□□□□ -0.35
PTPN21-204	ENST00000554178	RBM17	Q96I25	401 aa	Known RBP	12.88	□□□□□ -0.35
PTPN21-204	ENST00000554178	GPRC5D	Q9NZD1	345 aa		12.88	□□□□□ -0.35
PTPN21-204	ENST00000554178	PSME4	Q14997	1843 aa		12.88	□□□□□ -0.35
PTPN21-204	ENST00000554178	RAD17	O75943	681 aa		12.87	□□□□□ -0.35
PTPN21-204	ENST00000554178	HOXA10	P31260	410 aa	Predicted RBP	12.87	□□□□□ -0.35
PTPN21-204	ENST00000554178	USP50	Q70EL3	339 aa	Predicted RBP	12.87	□□□□□ -0.35
PTPN21-204	ENST00000554178	MIER1	Q8N108	512 aa		12.87	□□□□□ -0.35
PTPN21-204	ENST00000554178	TRPM4	Q8TD43	1214 aa		12.87	□□□□□ -0.35
PTPN21-204	ENST00000554178	MCOLN1	Q9GZU1	580 aa		12.87	□□□□□ -0.35
PTPN21-204	ENST00000554178	ERVV-1	B6SEH8	477 aa		12.86	□□□□□ -0.35
PTPN21-204	ENST00000554178	RGL2	O15211	777 aa		12.86	□□□□□ -0.35
PTPN21-204	ENST00000554178	EIF4A1	P60842	406 aa	Known RBP	12.86	□□□□□ -0.35
PTPN21-204	ENST00000554178	CXCL9	Q07325	125 aa		12.86	□□□□□ -0.35
PTPN21-204	ENST00000554178	PROSER3	Q2NL68	480 aa		12.86	□□□□□ -0.35
PTPN21-204	ENST00000554178	CC2D2B	Q6DHV5	1058 aa		12.86	□□□□□ -0.35
PTPN21-204	ENST00000554178	NECTIN2	Q92692	538 aa		12.86	□□□□□ -0.35
PTPN21-204	ENST00000554178	ZIC5	Q96T25	663 aa		12.86	□□□□□ -0.35
PTPN21-204	ENST00000554178	ADARB2	Q9NS39	739 aa	Known RBP	12.86	□□□□□ -0.35
PTPN21-204	ENST00000554178	CIAPIN1	Q6FI81	312 aa		12.85	□□□□□ -0.35
PTPN21-204	ENST00000554178	SAPCD2	Q86UD0	394 aa		12.85	□□□□□ -0.35
PTPN21-204	ENST00000554178	ZNF34	Q8IZ26	560 aa		12.85	□□□□□ -0.35
PTPN21-204	ENST00000554178	CRAMP1	Q96RY5	1269 aa		12.85	□□□□□ -0.35
PTPN21-204	ENST00000554178	BCL2L13	Q9BXK5	485 aa		12.85	□□□□□ -0.35
PTPN21-204	ENST00000554178	TSPYL2	Q9H2G4	693 aa	Predicted RBP	12.85	□□□□□ -0.35
PTPN21-204	ENST00000554178	HCLS1	P14317	486 aa	Predicted RBP	12.84	□□□□□ -0.35
PTPN21-204	ENST00000554178	EIF2S2	P20042	333 aa	Known RBP	12.84	□□□□□ -0.35
PTPN21-204	ENST00000554178	DGKZ	Q13574	1117 aa		12.84	□□□□□ -0.35
PTPN21-204	ENST00000554178	DPP8	Q6V1X1	898 aa	Predicted RBP	12.84	□□□□□ -0.35
PTPN21-204	ENST00000554178	GIGYF2	Q6Y7W6	1299 aa	Known RBP	12.84	□□□□□ -0.35
PTPN21-204	ENST00000554178	ATP6V0A2	Q9Y487	856 aa		12.84	□□□□□ -0.35
PTPN21-204	ENST00000554178	HTATSF1	O43719	755 aa	Known RBP	12.83	□□□□□ -0.36
PTPN21-204	ENST00000554178	HIRA	P54198	1017 aa	Predicted RBP	12.83	□□□□□ -0.36
PTPN21-204	ENST00000554178	PPP1R42	Q7Z4L9	355 aa		12.83	□□□□□ -0.36
PTPN21-204	ENST00000554178	NLRP3	Q96P20	1036 aa		12.83	□□□□□ -0.36
PTPN21-204	ENST00000554178	TMX4	Q9H1E5	349 aa	Predicted RBP	12.83	□□□□□ -0.36
PTPN21-204	ENST00000554178	ZNRF3	Q9ULT6	936 aa		12.83	□□□□□ -0.36
PTPN21-204	ENST00000554178	YDJC	A8MPS7	323 aa		12.82	□□□□□ -0.36
PTPN21-204	ENST00000554178	NEFM	P07197	916 aa		12.82	□□□□□ -0.36
PTPN21-204	ENST00000554178	AIMP1	Q12904	312 aa	Known RBP	12.82	□□□□□ -0.36
PTPN21-204	ENST00000554178	UTP14A	Q9BVJ6	771 aa	Known RBP	12.82	□□□□□ -0.36
PTPN21-204	ENST00000554178	ZNF646	O15015	1829 aa	Predicted RBP	12.81	□□□□□ -0.36
PTPN21-204	ENST00000554178	EGFR	P00533	1210 aa		12.81	□□□□□ -0.36
PTPN21-204	ENST00000554178	SOX10	P56693	466 aa		12.81	□□□□□ -0.36
PTPN21-204	ENST00000554178	NFE2L2	Q16236	605 aa		12.81	□□□□□ -0.36
PTPN21-204	ENST00000554178	MICALL2	Q8IY33	904 aa		12.81	□□□□□ -0.36
PTPN21-204	ENST00000554178	MPND	Q8N594	471 aa		12.81	□□□□□ -0.36
PTPN21-204	ENST00000554178	PNISR	Q8TF01	805 aa	Known RBP	12.81	□□□□□ -0.36
PTPN21-204	ENST00000554178	TSPYL4	Q9UJ04	414 aa		12.81	□□□□□ -0.36
PTPN21-204	ENST00000554178	MYH3	P11055	1940 aa		12.81	□□□□□ -0.36
PTPN21-204	ENST00000554178	MAPK8IP3	Q9UPT6	1336 aa		12.81	□□□□□ -0.36
PTPN21-204	ENST00000554178	ADM5	C9JUS6	153 aa		12.8	□□□□□ -0.36
PTPN21-204	ENST00000554178	MAP2K2	P36507	400 aa		12.8	□□□□□ -0.36
PTPN21-204	ENST00000554178	BRPF1	P55201	1214 aa	Predicted RBP	12.8	□□□□□ -0.36
PTPN21-204	ENST00000554178	HUNK	P57058	714 aa		12.8	□□□□□ -0.36
PTPN21-204	ENST00000554178	KIAA2012	Q0VF49	1180 aa		12.8	□□□□□ -0.36
PTPN21-204	ENST00000554178	TBC1D10B	Q4KMP7	808 aa	Predicted RBP	12.8	□□□□□ -0.36
PTPN21-204	ENST00000554178	PARP10	Q53GL7	1025 aa		12.8	□□□□□ -0.36
PTPN21-204	ENST00000554178	SAMD7	Q7Z3H4	446 aa		12.8	□□□□□ -0.36
PTPN21-204	ENST00000554178	LRP10	Q7Z4F1	713 aa		12.8	□□□□□ -0.36
PTPN21-204	ENST00000554178	USP48	Q86UV5	1035 aa		12.8	□□□□□ -0.36
PTPN21-204	ENST00000554178	SUPT20H	Q8NEM7	779 aa		12.8	□□□□□ -0.36
PTPN21-204	ENST00000554178	DBNDD1	Q9H9R9	158 aa		12.8	□□□□□ -0.36
PTPN21-204	ENST00000554178	RIMBP2	O15034	1052 aa		12.79	□□□□□ -0.36
PTPN21-204	ENST00000554178	PDIA6	Q15084	440 aa		12.79	□□□□□ -0.36
PTPN21-204	ENST00000554178	KRT24	Q2M2I5	525 aa		12.79	□□□□□ -0.36
PTPN21-204	ENST00000554178	GRIPAP1	Q4V328	841 aa		12.79	□□□□□ -0.36
PTPN21-204	ENST00000554178	PLEKHF1	Q96S99	279 aa		12.79	□□□□□ -0.36
PTPN21-204	ENST00000554178	RTFDC1	Q9BY42	306 aa	Predicted RBP	12.79	□□□□□ -0.36
PTPN21-204	ENST00000554178	CNOT7	Q9UIV1	285 aa	Known RBP	12.79	□□□□□ -0.36
PTPN21-204	ENST00000554178	PSMD14	O00487	310 aa		12.78	□□□□□ -0.36
PTPN21-204	ENST00000554178	GRAP	Q13588	217 aa		12.78	□□□□□ -0.36

Retrieved 100 of 20,778 RNA–protein pairs in 26 ms