RNA–Protein interactions for RNA: ENST00000554170.1

XRCC3-206, Transcript of X-ray repair cross complementing 3, humanhuman

TSL 4

Gene XRCC3, Length 572 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
XRCC3-206ENST00000554170 TSPYL6Q8N831 410 aa16.5■□□□□ 0.23
XRCC3-206ENST00000554170 GPTP24298 496 aa16.49■□□□□ 0.23
XRCC3-206ENST00000554170 EXOSC9Q06265 439 aaKnown RBP16.49■□□□□ 0.23
XRCC3-206ENST00000554170 XAGE3Q8WTP9 111 aa16.49■□□□□ 0.23
XRCC3-206ENST00000554170 ABHD8Q96I13 439 aa16.49■□□□□ 0.23
XRCC3-206ENST00000554170 CRAMP1Q96RY5 1269 aa16.49■□□□□ 0.23
XRCC3-206ENST00000554170 STK31Q9BXU1 1019 aa16.49■□□□□ 0.23
XRCC3-206ENST00000554170 ZBTB3Q9H5J0 574 aa16.49■□□□□ 0.23
XRCC3-206ENST00000554170 SPINK5Q9NQ38 1064 aaPredicted RBP16.49■□□□□ 0.23
XRCC3-206ENST00000554170 PPEF1O14829 653 aaPredicted RBP16.48■□□□□ 0.23
XRCC3-206ENST00000554170 FMR1Q06787 632 aaKnown RBP eCLIP16.48■□□□□ 0.23
XRCC3-206ENST00000554170 SUSD4Q5VX71 490 aa16.48■□□□□ 0.23
XRCC3-206ENST00000554170 USP50Q70EL3 339 aaPredicted RBP16.48■□□□□ 0.23
XRCC3-206ENST00000554170 LRP10Q7Z4F1 713 aa16.48■□□□□ 0.23
XRCC3-206ENST00000554170 SLC51AQ86UW1 340 aa16.48■□□□□ 0.23
XRCC3-206ENST00000554170 RBM17Q96I25 401 aaKnown RBP16.48■□□□□ 0.23
XRCC3-206ENST00000554170 LAMB2P55268 1798 aa16.48■□□□□ 0.23
XRCC3-206ENST00000554170 ANKRD36CQ5JPF3 1778 aa16.47■□□□□ 0.23
XRCC3-206ENST00000554170 ECE1P42892 770 aa16.47■□□□□ 0.23
XRCC3-206ENST00000554170 NIM1KQ8IY84 436 aa16.47■□□□□ 0.23
XRCC3-206ENST00000554170 ZNF34Q8IZ26 560 aa16.47■□□□□ 0.23
XRCC3-206ENST00000554170 CAPNS2Q96L46 248 aa16.47■□□□□ 0.23
XRCC3-206ENST00000554170 TRAF5O00463 557 aa16.46■□□□□ 0.23
XRCC3-206ENST00000554170 NTSR2O95665 410 aa16.46■□□□□ 0.23
XRCC3-206ENST00000554170 HNRNPUQ00839 825 aaKnown RBP eCLIP16.46■□□□□ 0.23
XRCC3-206ENST00000554170 HSP90AB3PQ58FF7 597 aa16.46■□□□□ 0.23
XRCC3-206ENST00000554170 CST9Q5W186 159 aa16.46■□□□□ 0.23
XRCC3-206ENST00000554170 GIGYF2Q6Y7W6 1299 aaKnown RBP16.46■□□□□ 0.23
XRCC3-206ENST00000554170 PAXIP1Q6ZW49 1069 aaPredicted RBP16.46■□□□□ 0.23
XRCC3-206ENST00000554170 CASP8AP2Q9UKL3 1982 aa16.46■□□□□ 0.22
XRCC3-206ENST00000554170 TCERG1O14776 1098 aaKnown RBP16.45■□□□□ 0.22
XRCC3-206ENST00000554170 PPIP5K2O43314 1243 aa16.45■□□□□ 0.22
XRCC3-206ENST00000554170 VAMP4O75379 141 aa16.45■□□□□ 0.22
XRCC3-206ENST00000554170 SLFN5Q08AF3 891 aa16.45■□□□□ 0.22
XRCC3-206ENST00000554170 CYP4F22Q6NT55 531 aa16.45■□□□□ 0.22
XRCC3-206ENST00000554170 ANKRD13DQ6ZTN6 518 aa16.45■□□□□ 0.22
XRCC3-206ENST00000554170 C3orf67Q6ZVT6 689 aa16.45■□□□□ 0.22
XRCC3-206ENST00000554170 GPR101Q96P66 508 aaPredicted RBP16.45■□□□□ 0.22
XRCC3-206ENST00000554170 BEGAINQ9BUH8 593 aa16.45■□□□□ 0.22
XRCC3-206ENST00000554170 GPRC5DQ9NZD1 345 aa16.45■□□□□ 0.22
XRCC3-206ENST00000554170 TLL2Q9Y6L7 1015 aa16.45■□□□□ 0.22
XRCC3-206ENST00000554170 DDX58O95786 925 aaKnown RBP16.44■□□□□ 0.22
XRCC3-206ENST00000554170 GRM1Q13255 1194 aa16.44■□□□□ 0.22
XRCC3-206ENST00000554170 AOC3Q16853 763 aa16.44■□□□□ 0.22
XRCC3-206ENST00000554170 PPP1R42Q7Z4L9 355 aa16.44■□□□□ 0.22
XRCC3-206ENST00000554170 PLBD2Q8NHP8 589 aa16.44■□□□□ 0.22
XRCC3-206ENST00000554170 VPS33BQ9H267 617 aa16.44■□□□□ 0.22
XRCC3-206ENST00000554170 TAF1P21675 1872 aa16.44■□□□□ 0.22
XRCC3-206ENST00000554170 SLC4A2P04920 1241 aa16.43■□□□□ 0.22
XRCC3-206ENST00000554170 FAM161AQ3B820 660 aa16.43■□□□□ 0.22
XRCC3-206ENST00000554170 PARP10Q53GL7 1025 aa16.43■□□□□ 0.22
XRCC3-206ENST00000554170 RIC3Q7Z5B4 369 aa16.43■□□□□ 0.22
XRCC3-206ENST00000554170 NLRP3Q96P20 1036 aa16.43■□□□□ 0.22
XRCC3-206ENST00000554170 TMX4Q9H1E5 349 aaPredicted RBP16.43■□□□□ 0.22
XRCC3-206ENST00000554170 PHAXQ9H814 394 aaKnown RBP16.43■□□□□ 0.22
XRCC3-206ENST00000554170 ADARB2Q9NS39 739 aaKnown RBP16.43■□□□□ 0.22
XRCC3-206ENST00000554170 ATP6V0A2Q9Y487 856 aa16.43■□□□□ 0.22
XRCC3-206ENST00000554170 CDCA7LQ96GN5 454 aa16.42■□□□□ 0.22
XRCC3-206ENST00000554170 POLR2AP24928 1970 aaKnown RBP16.42■□□□□ 0.22
XRCC3-206ENST00000554170 MAP2K2P36507 400 aa16.41■□□□□ 0.22
XRCC3-206ENST00000554170 CXCL9Q07325 125 aa16.41■□□□□ 0.22
XRCC3-206ENST00000554170 TCIRG1Q13488 830 aa16.41■□□□□ 0.22
XRCC3-206ENST00000554170 SLC10A5Q5PT55 438 aa16.41■□□□□ 0.22
XRCC3-206ENST00000554170 SAPCD2Q86UD0 394 aa16.41■□□□□ 0.22
XRCC3-206ENST00000554170 UTP14AQ9BVJ6 771 aaKnown RBP16.41■□□□□ 0.22
XRCC3-206ENST00000554170 RTFDC1Q9BY42 306 aaPredicted RBP16.41■□□□□ 0.22
XRCC3-206ENST00000554170 ZNRF3Q9ULT6 936 aa16.41■□□□□ 0.22
XRCC3-206ENST00000554170 ABCC4O15439 1325 aa16.41■□□□□ 0.22
XRCC3-206ENST00000554170 CELF2O95319 508 aaKnown RBP16.4■□□□□ 0.22
XRCC3-206ENST00000554170 SUPT20HQ8NEM7 779 aa16.4■□□□□ 0.22
XRCC3-206ENST00000554170 CDHR2Q9BYE9 1310 aa16.4■□□□□ 0.22
XRCC3-206ENST00000554170 AOC2O75106 756 aa16.39■□□□□ 0.21
XRCC3-206ENST00000554170 SLC34A2O95436 690 aa16.39■□□□□ 0.21
XRCC3-206ENST00000554170 GMPSP49915 693 aaPredicted RBP16.39■□□□□ 0.21
XRCC3-206ENST00000554170 TRMT2AQ8IZ69 625 aaKnown RBP16.39■□□□□ 0.21
XRCC3-206ENST00000554170 HHIPL1Q96JK4 782 aa16.39■□□□□ 0.21
XRCC3-206ENST00000554170 TSKSQ9UJT2 592 aa16.39■□□□□ 0.21
XRCC3-206ENST00000554170 PDE4DIPQ5VU43 2346 aa16.39■□□□□ 0.21
XRCC3-206ENST00000554170 CCDC85CA6NKD9 419 aa16.38■□□□□ 0.21
XRCC3-206ENST00000554170 CA12O43570 354 aa16.38■□□□□ 0.21
XRCC3-206ENST00000554170 DPP8Q6V1X1 898 aaPredicted RBP16.38■□□□□ 0.21
XRCC3-206ENST00000554170 ZNF428Q96B54 188 aa16.38■□□□□ 0.21
XRCC3-206ENST00000554170 PGAP2Q9UHJ9 254 aa16.38■□□□□ 0.21
XRCC3-206ENST00000554170 LRRC37AA6NMS7 1700 aa16.38■□□□□ 0.21
XRCC3-206ENST00000554170 BBOX1O75936 387 aa16.37■□□□□ 0.21
XRCC3-206ENST00000554170 KIAA2012Q0VF49 1180 aa16.37■□□□□ 0.21
XRCC3-206ENST00000554170 FLIIQ13045 1269 aa16.37■□□□□ 0.21
XRCC3-206ENST00000554170 CIAPIN1Q6FI81 312 aa16.37■□□□□ 0.21
XRCC3-206ENST00000554170 KSR2Q6VAB6 950 aa16.37■□□□□ 0.21
XRCC3-206ENST00000554170 SP8Q8IXZ3 490 aa16.37■□□□□ 0.21
XRCC3-206ENST00000554170 ZC3H15Q8WU90 426 aaKnown RBP16.37■□□□□ 0.21
XRCC3-206ENST00000554170 GLIS2Q9BZE0 524 aaPredicted RBP16.37■□□□□ 0.21
XRCC3-206ENST00000554170 DUOX1Q9NRD9 1551 aa16.36■□□□□ 0.21
XRCC3-206ENST00000554170 PI4KAP2A4QPH2 592 aa16.36■□□□□ 0.21
XRCC3-206ENST00000554170 CT47B1P0C2W7 299 aaPredicted RBP16.36■□□□□ 0.21
XRCC3-206ENST00000554170 RGS19P49795 217 aa16.36■□□□□ 0.21
XRCC3-206ENST00000554170 BRPF1P55201 1214 aaPredicted RBP16.36■□□□□ 0.21
XRCC3-206ENST00000554170 MLLT1Q03111 559 aaPredicted RBP16.36■□□□□ 0.21
XRCC3-206ENST00000554170 NEXNQ0ZGT2 675 aa16.36■□□□□ 0.21
XRCC3-206ENST00000554170 FKBP5Q13451 457 aaPredicted RBP16.36■□□□□ 0.21
Retrieved 100 of 20,778 RNA–protein pairs in 29.7 ms