RNA–Protein interactions for RNA: ENST00000554026.5

IFT43-206, Transcript of intraflagellar transport 43, humanhuman

TSL 2

Gene IFT43, Length 1,102 nt, Biotype retained intron, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IFT43-206ENST00000554026 BBOX1O75936 387 aa14.2□□□□□ -0.14
IFT43-206ENST00000554026 TRIM27P14373 513 aa14.2□□□□□ -0.14
IFT43-206ENST00000554026 INTS3Q68E01 1043 aaKnown RBP14.2□□□□□ -0.14
IFT43-206ENST00000554026 FTSJ3Q8IY81 847 aaKnown RBP14.2□□□□□ -0.14
IFT43-206ENST00000554026 SYNE4Q8N205 404 aa14.2□□□□□ -0.14
IFT43-206ENST00000554026 COL11A2P13942 1736 aaPredicted RBP14.2□□□□□ -0.14
IFT43-206ENST00000554026 DDX60Q8IY21 1712 aaKnown RBP14.2□□□□□ -0.14
IFT43-206ENST00000554026 TNRC6CQ9HCJ0 1690 aaKnown RBP14.2□□□□□ -0.14
IFT43-206ENST00000554026 CTSWP56202 376 aa14.19□□□□□ -0.14
IFT43-206ENST00000554026 PRPF40BQ6NWY9 871 aaKnown RBP14.19□□□□□ -0.14
IFT43-206ENST00000554026 RTL9Q8NET4 1388 aa14.19□□□□□ -0.14
IFT43-206ENST00000554026 CASP7P55210 303 aa14.18□□□□□ -0.14
IFT43-206ENST00000554026 GRAPQ13588 217 aa14.18□□□□□ -0.14
IFT43-206ENST00000554026 DZIP1LQ8IYY4 767 aaKnown RBP14.18□□□□□ -0.14
IFT43-206ENST00000554026 GRAPLQ8TC17 118 aaPredicted RBP14.18□□□□□ -0.14
IFT43-206ENST00000554026 CDC5LQ99459 802 aaKnown RBP14.18□□□□□ -0.14
IFT43-206ENST00000554026 MYH3P11055 1940 aa14.17□□□□□ -0.14
IFT43-206ENST00000554026 GNAI3P08754 354 aa14.17□□□□□ -0.14
IFT43-206ENST00000554026 TTLL11Q8NHH1 800 aa14.17□□□□□ -0.14
IFT43-206ENST00000554026 CHMP4BQ9H444 224 aaKnown RBP14.17□□□□□ -0.14
IFT43-206ENST00000554026 GPBP1L1Q9HC44 474 aaPredicted RBP14.17□□□□□ -0.14
IFT43-206ENST00000554026 PPEF1O14829 653 aaPredicted RBP14.16□□□□□ -0.14
IFT43-206ENST00000554026 CSF1RP07333 972 aa14.16□□□□□ -0.14
IFT43-206ENST00000554026 UBTFL1P0CB47 393 aaPredicted RBP14.16□□□□□ -0.14
IFT43-206ENST00000554026 CCDC93Q567U6 631 aa14.16□□□□□ -0.14
IFT43-206ENST00000554026 C3orf67Q6ZVT6 689 aa14.16□□□□□ -0.14
IFT43-206ENST00000554026 RTKN2Q8IZC4 609 aa14.16□□□□□ -0.14
IFT43-206ENST00000554026 JARID2Q92833 1246 aaPredicted RBP14.16□□□□□ -0.14
IFT43-206ENST00000554026 USP44Q9H0E7 712 aa14.16□□□□□ -0.14
IFT43-206ENST00000554026 RPS8P62241 208 aaKnown RBP14.15□□□□□ -0.14
IFT43-206ENST00000554026 PDE3AQ14432 1141 aa14.15□□□□□ -0.14
IFT43-206ENST00000554026 ARHGAP27Q6ZUM4 889 aa14.15□□□□□ -0.14
IFT43-206ENST00000554026 CLUAP1Q96AJ1 413 aa14.15□□□□□ -0.14
IFT43-206ENST00000554026 WWC3Q9ULE0 1092 aa14.15□□□□□ -0.14
IFT43-206ENST00000554026 ATP6V0A2Q9Y487 856 aa14.15□□□□□ -0.14
IFT43-206ENST00000554026 SLX4Q8IY92 1834 aa14.14□□□□□ -0.15
IFT43-206ENST00000554026 C21orf2O43822 256 aa14.14□□□□□ -0.15
IFT43-206ENST00000554026 NBPF7P0C2Y1 421 aaPredicted RBP14.14□□□□□ -0.15
IFT43-206ENST00000554026 IFIT5Q13325 482 aaKnown RBP14.14□□□□□ -0.15
IFT43-206ENST00000554026 CCDC57Q2TAC2 916 aa14.14□□□□□ -0.15
IFT43-206ENST00000554026 ANKRD18AQ8IVF6 992 aa14.14□□□□□ -0.15
IFT43-206ENST00000554026 SP8Q8IXZ3 490 aa14.14□□□□□ -0.15
IFT43-206ENST00000554026 ZNF526Q8TF50 670 aaPredicted RBP14.14□□□□□ -0.15
IFT43-206ENST00000554026 C7orf43Q8WVR3 580 aa14.14□□□□□ -0.15
IFT43-206ENST00000554026 LTBP3Q9NS15 1303 aa14.14□□□□□ -0.15
IFT43-206ENST00000554026 CACNA1SQ13698 1873 aa14.13□□□□□ -0.15
IFT43-206ENST00000554026 ANKRD18BA2A2Z9 1011 aa14.13□□□□□ -0.15
IFT43-206ENST00000554026 IGHMBP2P38935 993 aaKnown RBP14.13□□□□□ -0.15
IFT43-206ENST00000554026 FOXO4P98177 505 aa14.13□□□□□ -0.15
IFT43-206ENST00000554026 TMEM57Q8N5G2 664 aa14.13□□□□□ -0.15
IFT43-206ENST00000554026 ITGA6P23229 1130 aa14.12□□□□□ -0.15
IFT43-206ENST00000554026 RABL6Q3YEC7 729 aaPredicted RBP14.12□□□□□ -0.15
IFT43-206ENST00000554026 LMBR1LQ6UX01 489 aa14.12□□□□□ -0.15
IFT43-206ENST00000554026 ITPRIPQ8IWB1 547 aa14.12□□□□□ -0.15
IFT43-206ENST00000554026 SUPT20HQ8NEM7 779 aa14.12□□□□□ -0.15
IFT43-206ENST00000554026 SUCLG2Q96I99 432 aa14.12□□□□□ -0.15
IFT43-206ENST00000554026 VPS33BQ9H267 617 aa14.12□□□□□ -0.15
IFT43-206ENST00000554026 GREM2Q9H772 168 aa14.12□□□□□ -0.15
IFT43-206ENST00000554026 CHMP3Q9Y3E7 222 aa14.12□□□□□ -0.15
IFT43-206ENST00000554026 GNAI2P04899 355 aa14.11□□□□□ -0.15
IFT43-206ENST00000554026 TAF7LQ5H9L4 462 aa14.11□□□□□ -0.15
IFT43-206ENST00000554026 CELF1Q92879 486 aaKnown RBP14.11□□□□□ -0.15
IFT43-206ENST00000554026 PSMD1Q99460 953 aa14.11□□□□□ -0.15
IFT43-206ENST00000554026 MPHOSPH8Q99549 860 aa14.11□□□□□ -0.15
IFT43-206ENST00000554026 TAOK3Q9H2K8 898 aa14.11□□□□□ -0.15
IFT43-206ENST00000554026 BICC1Q9H694 974 aaKnown RBP14.11□□□□□ -0.15
IFT43-206ENST00000554026 SEC31BQ9NQW1 1179 aa14.11□□□□□ -0.15
IFT43-206ENST00000554026 BSDC1Q9NW68 430 aaPredicted RBP14.11□□□□□ -0.15
IFT43-206ENST00000554026 ZNF219Q9P2Y4 722 aaPredicted RBP14.11□□□□□ -0.15
IFT43-206ENST00000554026 DDX19BQ9UMR2 479 aa14.11□□□□□ -0.15
IFT43-206ENST00000554026 LMNB1P20700 586 aa14.1□□□□□ -0.15
IFT43-206ENST00000554026 FKBP4Q02790 459 aaKnown RBP eCLIP14.1□□□□□ -0.15
IFT43-206ENST00000554026 FAM161AQ3B820 660 aa14.1□□□□□ -0.15
IFT43-206ENST00000554026 CCDC85AQ96PX6 553 aaPredicted RBP14.1□□□□□ -0.15
IFT43-206ENST00000554026 MEIS3Q99687 375 aa14.1□□□□□ -0.15
IFT43-206ENST00000554026 FER1L6Q2WGJ9 1857 aa14.1□□□□□ -0.15
IFT43-206ENST00000554026 MVPQ14764 893 aaKnown RBP14.09□□□□□ -0.15
IFT43-206ENST00000554026 EPHA10Q5JZY3 1008 aa14.09□□□□□ -0.15
IFT43-206ENST00000554026 DPP8Q6V1X1 898 aaPredicted RBP14.09□□□□□ -0.15
IFT43-206ENST00000554026 MPNDQ8N594 471 aa14.09□□□□□ -0.15
IFT43-206ENST00000554026 KAZALD1Q96I82 304 aa14.09□□□□□ -0.15
IFT43-206ENST00000554026 ANKRD2Q9GZV1 360 aa14.09□□□□□ -0.15
IFT43-206ENST00000554026 TNNQ9UQP3 1299 aa14.09□□□□□ -0.15
IFT43-206ENST00000554026 ZC3H4Q9UPT8 1303 aaKnown RBP14.09□□□□□ -0.15
IFT43-206ENST00000554026 ZBTB7BO15156 539 aaPredicted RBP14.08□□□□□ -0.16
IFT43-206ENST00000554026 RLBP1P12271 317 aa14.08□□□□□ -0.16
IFT43-206ENST00000554026 HSPA6P17066 643 aa14.08□□□□□ -0.16
IFT43-206ENST00000554026 RRP1P56182 461 aaKnown RBP14.08□□□□□ -0.16
IFT43-206ENST00000554026 IFFO2Q5TF58 517 aa14.08□□□□□ -0.16
IFT43-206ENST00000554026 PANK1Q8TE04 598 aa14.08□□□□□ -0.16
IFT43-206ENST00000554026 PODXL2Q9NZ53 605 aa14.08□□□□□ -0.16
IFT43-206ENST00000554026 FBXO3Q9UK99 471 aa14.08□□□□□ -0.16
IFT43-206ENST00000554026 LRRFIP2Q9Y608 721 aaKnown RBP14.08□□□□□ -0.16
IFT43-206ENST00000554026 LRRC37AA6NMS7 1700 aa14.07□□□□□ -0.16
IFT43-206ENST00000554026 NFKBIEO00221 500 aa14.07□□□□□ -0.16
IFT43-206ENST00000554026 PLIN1O60240 522 aa14.07□□□□□ -0.16
IFT43-206ENST00000554026 MTX1Q13505 466 aa14.07□□□□□ -0.16
IFT43-206ENST00000554026 LDHAL6AQ6ZMR3 332 aa14.07□□□□□ -0.16
IFT43-206ENST00000554026 ANKRD44Q8N8A2 993 aa14.07□□□□□ -0.16
IFT43-206ENST00000554026 EYA3Q99504 573 aa14.07□□□□□ -0.16
Retrieved 100 of 20,778 RNA–protein pairs in 20.9 ms