RNA–Protein interactions for RNA: ENST00000553870.1

CHD8-206, Transcript of chromodomain helicase DNA binding protein 8, humanhuman

TSL 5

Gene CHD8, Length 679 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD8-206ENST00000553870 ATP6V0A2Q9Y487 856 aa11.82□□□□□ -0.52
CHD8-206ENST00000553870 CHD4Q14839 1912 aa11.82□□□□□ -0.52
CHD8-206ENST00000553870 GRM8O00222 908 aa11.81□□□□□ -0.52
CHD8-206ENST00000553870 LMNB1P20700 586 aa11.81□□□□□ -0.52
CHD8-206ENST00000553870 CCT4P50991 539 aaKnown RBP11.81□□□□□ -0.52
CHD8-206ENST00000553870 CASP7P55210 303 aa11.81□□□□□ -0.52
CHD8-206ENST00000553870 UBE3BQ7Z3V4 1068 aa11.81□□□□□ -0.52
CHD8-206ENST00000553870 COL11A2P13942 1736 aaPredicted RBP11.8□□□□□ -0.52
CHD8-206ENST00000553870 PPEF1O14829 653 aaPredicted RBP11.8□□□□□ -0.52
CHD8-206ENST00000553870 CSF1RP07333 972 aa11.8□□□□□ -0.52
CHD8-206ENST00000553870 CTSWP56202 376 aa11.8□□□□□ -0.52
CHD8-206ENST00000553870 RPS8P62241 208 aaKnown RBP11.8□□□□□ -0.52
CHD8-206ENST00000553870 TTLL11Q8NHH1 800 aa11.8□□□□□ -0.52
CHD8-206ENST00000553870 JARID2Q92833 1246 aaPredicted RBP11.8□□□□□ -0.52
CHD8-206ENST00000553870 PSMD1Q99460 953 aa11.8□□□□□ -0.52
CHD8-206ENST00000553870 VPS33BQ9H267 617 aa11.8□□□□□ -0.52
CHD8-206ENST00000553870 TAOK3Q9H2K8 898 aa11.8□□□□□ -0.52
CHD8-206ENST00000553870 HDAC5Q9UQL6 1122 aa11.8□□□□□ -0.52
CHD8-206ENST00000553870 SLX4Q8IY92 1834 aa11.8□□□□□ -0.52
CHD8-206ENST00000553870 UTYO14607 1347 aa11.8□□□□□ -0.52
CHD8-206ENST00000553870 ABCC4O15439 1325 aa11.8□□□□□ -0.52
CHD8-206ENST00000553870 ZC3H4Q9UPT8 1303 aaKnown RBP11.8□□□□□ -0.52
CHD8-206ENST00000553870 RTL9Q8NET4 1388 aa11.79□□□□□ -0.52
CHD8-206ENST00000553870 TNRC6CQ9HCJ0 1690 aaKnown RBP11.79□□□□□ -0.52
CHD8-206ENST00000553870 NFKBIEO00221 500 aa11.79□□□□□ -0.52
CHD8-206ENST00000553870 FKBP4Q02790 459 aaKnown RBP eCLIP11.79□□□□□ -0.52
CHD8-206ENST00000553870 C9orf131Q5VYM1 1079 aa11.79□□□□□ -0.52
CHD8-206ENST00000553870 CDC5LQ99459 802 aaKnown RBP11.79□□□□□ -0.52
CHD8-206ENST00000553870 ZNF219Q9P2Y4 722 aaPredicted RBP11.79□□□□□ -0.52
CHD8-206ENST00000553870 UTRNP46939 3433 aa11.79□□□□□ -0.52
CHD8-206ENST00000553870 GOLGB1Q14789 3259 aaKnown RBP11.78□□□□□ -0.52
CHD8-206ENST00000553870 BCAR3O75815 825 aa11.78□□□□□ -0.52
CHD8-206ENST00000553870 ATF7IPQ6VMQ6 1270 aa11.78□□□□□ -0.52
CHD8-206ENST00000553870 SUPT20HQ8NEM7 779 aa11.78□□□□□ -0.52
CHD8-206ENST00000553870 CELF1Q92879 486 aaKnown RBP11.78□□□□□ -0.52
CHD8-206ENST00000553870 DDX60Q8IY21 1712 aaKnown RBP11.77□□□□□ -0.52
CHD8-206ENST00000553870 ZKSCAN2Q63HK3 967 aa11.77□□□□□ -0.53
CHD8-206ENST00000553870 INTS3Q68E01 1043 aaKnown RBP11.77□□□□□ -0.53
CHD8-206ENST00000553870 ANKRD18AQ8IVF6 992 aa11.77□□□□□ -0.53
CHD8-206ENST00000553870 MPNDQ8N594 471 aa11.77□□□□□ -0.53
CHD8-206ENST00000553870 RTFDC1Q9BY42 306 aaPredicted RBP11.77□□□□□ -0.53
CHD8-206ENST00000553870 USP44Q9H0E7 712 aa11.77□□□□□ -0.53
CHD8-206ENST00000553870 RNF181Q9P0P0 153 aa11.77□□□□□ -0.53
CHD8-206ENST00000553870 NBPF7P0C2Y1 421 aaPredicted RBP11.76□□□□□ -0.53
CHD8-206ENST00000553870 TRIM27P14373 513 aa11.76□□□□□ -0.53
CHD8-206ENST00000553870 FOXO4P98177 505 aa11.76□□□□□ -0.53
CHD8-206ENST00000553870 SEC31BQ9NQW1 1179 aa11.76□□□□□ -0.53
CHD8-206ENST00000553870 BSDC1Q9NW68 430 aaPredicted RBP11.76□□□□□ -0.53
CHD8-206ENST00000553870 FER1L6Q2WGJ9 1857 aa11.76□□□□□ -0.53
CHD8-206ENST00000553870 LAMB2P55268 1798 aa11.75□□□□□ -0.53
CHD8-206ENST00000553870 ANKRD18BA2A2Z9 1011 aa11.75□□□□□ -0.53
CHD8-206ENST00000553870 MS4A1P11836 297 aa11.75□□□□□ -0.53
CHD8-206ENST00000553870 IGHMBP2P38935 993 aaKnown RBP11.75□□□□□ -0.53
CHD8-206ENST00000553870 RASSF7Q02833 373 aa11.75□□□□□ -0.53
CHD8-206ENST00000553870 IFIT5Q13325 482 aaKnown RBP11.75□□□□□ -0.53
CHD8-206ENST00000553870 DPY19L2Q6NUT2 758 aa11.75□□□□□ -0.53
CHD8-206ENST00000553870 DPP8Q6V1X1 898 aaPredicted RBP11.75□□□□□ -0.53
CHD8-206ENST00000553870 FRAT1Q92837 279 aaPredicted RBP11.75□□□□□ -0.53
CHD8-206ENST00000553870 GREM2Q9H772 168 aa11.75□□□□□ -0.53
CHD8-206ENST00000553870 PODXL2Q9NZ53 605 aa11.75□□□□□ -0.53
CHD8-206ENST00000553870 SNED1Q8TER0 1413 aa11.75□□□□□ -0.53
CHD8-206ENST00000553870 ITGA6P23229 1130 aa11.74□□□□□ -0.53
CHD8-206ENST00000553870 IARSP41252 1262 aaKnown RBP11.74□□□□□ -0.53
CHD8-206ENST00000553870 PRELPP51888 382 aa11.74□□□□□ -0.53
CHD8-206ENST00000553870 RABL6Q3YEC7 729 aaPredicted RBP11.74□□□□□ -0.53
CHD8-206ENST00000553870 LMBR1LQ6UX01 489 aa11.74□□□□□ -0.53
CHD8-206ENST00000553870 OLFM4Q6UX06 510 aa11.74□□□□□ -0.53
CHD8-206ENST00000553870 ZNF784Q8NCA9 323 aaPredicted RBP11.74□□□□□ -0.53
CHD8-206ENST00000553870 JDP2Q8WYK2 163 aa11.74□□□□□ -0.53
CHD8-206ENST00000553870 CCDC85AQ96PX6 553 aaPredicted RBP11.74□□□□□ -0.53
CHD8-206ENST00000553870 SBF1O95248 1867 aa11.73□□□□□ -0.53
CHD8-206ENST00000553870 GNAI3P08754 354 aa11.73□□□□□ -0.53
CHD8-206ENST00000553870 CCDC57Q2TAC2 916 aa11.73□□□□□ -0.53
CHD8-206ENST00000553870 KAZALD1Q96I82 304 aa11.73□□□□□ -0.53
CHD8-206ENST00000553870 SUCLG2Q96I99 432 aa11.73□□□□□ -0.53
CHD8-206ENST00000553870 MPHOSPH8Q99549 860 aa11.73□□□□□ -0.53
CHD8-206ENST00000553870 ZNF277Q9NRM2 450 aaPredicted RBP11.73□□□□□ -0.53
CHD8-206ENST00000553870 RCAN3Q9UKA8 241 aa11.73□□□□□ -0.53
CHD8-206ENST00000553870 NSFL1CQ9UNZ2 370 aaKnown RBP11.73□□□□□ -0.53
CHD8-206ENST00000553870 KDM2BQ8NHM5 1336 aa11.72□□□□□ -0.53
CHD8-206ENST00000553870 UBTFL1P0CB47 393 aaPredicted RBP11.72□□□□□ -0.53
CHD8-206ENST00000553870 FAM161AQ3B820 660 aa11.72□□□□□ -0.53
CHD8-206ENST00000553870 EPHA10Q5JZY3 1008 aa11.72□□□□□ -0.53
CHD8-206ENST00000553870 DZIP1LQ8IYY4 767 aaKnown RBP11.72□□□□□ -0.53
CHD8-206ENST00000553870 EYA3Q99504 573 aa11.72□□□□□ -0.53
CHD8-206ENST00000553870 ANKRD2Q9GZV1 360 aa11.72□□□□□ -0.53
CHD8-206ENST00000553870 ANKIB1Q9P2G1 1089 aa11.72□□□□□ -0.53
CHD8-206ENST00000553870 MINPP1Q9UNW1 487 aa11.72□□□□□ -0.53
CHD8-206ENST00000553870 CHMP3Q9Y3E7 222 aa11.72□□□□□ -0.53
CHD8-206ENST00000553870 CACNA1SQ13698 1873 aa11.72□□□□□ -0.53
CHD8-206ENST00000553870 XDHP47989 1333 aa11.71□□□□□ -0.53
CHD8-206ENST00000553870 MYH3P11055 1940 aa11.71□□□□□ -0.53
CHD8-206ENST00000553870 GLTPD2A6NH11 291 aa11.71□□□□□ -0.53
CHD8-206ENST00000553870 ATP2B4P23634 1241 aa11.71□□□□□ -0.53
CHD8-206ENST00000553870 GPSM2P81274 684 aa11.71□□□□□ -0.53
CHD8-206ENST00000553870 KIAA2012Q0VF49 1180 aa11.71□□□□□ -0.53
CHD8-206ENST00000553870 FTSJ3Q8IY81 847 aaKnown RBP11.71□□□□□ -0.53
CHD8-206ENST00000553870 LARGE2Q8N3Y3 721 aa11.71□□□□□ -0.53
CHD8-206ENST00000553870 BICC1Q9H694 974 aaKnown RBP11.71□□□□□ -0.53
CHD8-206ENST00000553870 GPBP1L1Q9HC44 474 aaPredicted RBP11.71□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 26.6 ms