RNA–Protein interactions for RNA: ENST00000553855.5

PSEN1-209, Transcript of presenilin 1, humanhuman

TSL 1 (best)

Gene PSEN1, Length 1,254 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PSEN1-209ENST00000553855 TSR2Q969E8 191 aaKnown RBP10.71□□□□□ -0.69
PSEN1-209ENST00000553855 CHPF2Q9P2E5 772 aa10.71□□□□□ -0.69
PSEN1-209ENST00000553855 C10orf71Q711Q0 1435 aa10.7□□□□□ -0.7
PSEN1-209ENST00000553855 FAM177BA6PVY3 158 aa10.7□□□□□ -0.7
PSEN1-209ENST00000553855 H0YIN7 160 aa10.7□□□□□ -0.7
PSEN1-209ENST00000553855 TRIM66O15016 1216 aa10.7□□□□□ -0.7
PSEN1-209ENST00000553855 DDX58O95786 925 aaKnown RBP10.7□□□□□ -0.7
PSEN1-209ENST00000553855 TWISTNBQ3B726 338 aaPredicted RBP10.7□□□□□ -0.7
PSEN1-209ENST00000553855 TTLL7Q6ZT98 887 aa10.7□□□□□ -0.7
PSEN1-209ENST00000553855 COPS6Q7L5N1 327 aa10.7□□□□□ -0.7
PSEN1-209ENST00000553855 PPP1R42Q7Z4L9 355 aa10.7□□□□□ -0.7
PSEN1-209ENST00000553855 XAGE3Q8WTP9 111 aa10.7□□□□□ -0.7
PSEN1-209ENST00000553855 PIM2Q9P1W9 311 aa10.7□□□□□ -0.7
PSEN1-209ENST00000553855 A0A0G2JLW4 131 aa10.69□□□□□ -0.7
PSEN1-209ENST00000553855 GPR37O15354 613 aa10.69□□□□□ -0.7
PSEN1-209ENST00000553855 ANXA1P04083 346 aa10.69□□□□□ -0.7
PSEN1-209ENST00000553855 DPEP1P16444 411 aa10.69□□□□□ -0.7
PSEN1-209ENST00000553855 PARP10Q53GL7 1025 aa10.69□□□□□ -0.7
PSEN1-209ENST00000553855 GIGYF2Q6Y7W6 1299 aaKnown RBP10.69□□□□□ -0.7
PSEN1-209ENST00000553855 C8orf58Q8NAV2 365 aa10.69□□□□□ -0.7
PSEN1-209ENST00000553855 BRIP1Q9BX63 1249 aa10.69□□□□□ -0.7
PSEN1-209ENST00000553855 TMEM121BQ9BXQ6 578 aaPredicted RBP10.69□□□□□ -0.7
PSEN1-209ENST00000553855 KDM4CQ9H3R0 1056 aa10.69□□□□□ -0.7
PSEN1-209ENST00000553855 BCS1LQ9Y276 419 aa10.69□□□□□ -0.7
PSEN1-209ENST00000553855 FANCIQ9NVI1 1328 aa10.68□□□□□ -0.7
PSEN1-209ENST00000553855 C2orf72A6NCS6 295 aa10.68□□□□□ -0.7
PSEN1-209ENST00000553855 E9PSI1 815 aa10.68□□□□□ -0.7
PSEN1-209ENST00000553855 KIF3CO14782 793 aa10.68□□□□□ -0.7
PSEN1-209ENST00000553855 GPTP24298 496 aa10.68□□□□□ -0.7
PSEN1-209ENST00000553855 PDE4DQ08499 809 aa10.68□□□□□ -0.7
PSEN1-209ENST00000553855 HLFQ16534 295 aa10.68□□□□□ -0.7
PSEN1-209ENST00000553855 DALRD3Q5D0E6 543 aaKnown RBP10.68□□□□□ -0.7
PSEN1-209ENST00000553855 PRR5LQ6MZQ0 368 aa10.68□□□□□ -0.7
PSEN1-209ENST00000553855 ANKRD13DQ6ZTN6 518 aa10.68□□□□□ -0.7
PSEN1-209ENST00000553855 RIC3Q7Z5B4 369 aa10.68□□□□□ -0.7
PSEN1-209ENST00000553855 C2CD5Q86YS7 1000 aa10.68□□□□□ -0.7
PSEN1-209ENST00000553855 PLBD2Q8NHP8 589 aa10.68□□□□□ -0.7
PSEN1-209ENST00000553855 WWC3Q9ULE0 1092 aa10.68□□□□□ -0.7
PSEN1-209ENST00000553855 SCN7AQ01118 1682 aa10.67□□□□□ -0.7
PSEN1-209ENST00000553855 PROSER3Q2NL68 480 aa10.67□□□□□ -0.7
PSEN1-209ENST00000553855 ZNF622Q969S3 477 aaKnown RBP eCLIP10.67□□□□□ -0.7
PSEN1-209ENST00000553855 CHRNA5P30532 468 aa10.66□□□□□ -0.7
PSEN1-209ENST00000553855 EXOSC9Q06265 439 aaKnown RBP10.66□□□□□ -0.7
PSEN1-209ENST00000553855 TTLL6Q8N841 843 aa10.66□□□□□ -0.7
PSEN1-209ENST00000553855 IL27Q8NEV9 243 aa10.66□□□□□ -0.7
PSEN1-209ENST00000553855 UTP14AQ9BVJ6 771 aaKnown RBP10.66□□□□□ -0.7
PSEN1-209ENST00000553855 PXDNLA1KZ92 1463 aa10.66□□□□□ -0.7
PSEN1-209ENST00000553855 ATP10DQ9P241 1426 aa10.66□□□□□ -0.7
PSEN1-209ENST00000553855 HSP90B1P14625 803 aaKnown RBP10.65□□□□□ -0.7
PSEN1-209ENST00000553855 MAP3K9P80192 1104 aa10.65□□□□□ -0.7
PSEN1-209ENST00000553855 NEXNQ0ZGT2 675 aa10.65□□□□□ -0.7
PSEN1-209ENST00000553855 TCIRG1Q13488 830 aa10.65□□□□□ -0.7
PSEN1-209ENST00000553855 ARHGAP27Q6ZUM4 889 aa10.65□□□□□ -0.7
PSEN1-209ENST00000553855 ZNF34Q8IZ26 560 aa10.65□□□□□ -0.7
PSEN1-209ENST00000553855 CCDC24Q8N4L8 307 aa10.65□□□□□ -0.7
PSEN1-209ENST00000553855 TSPYL6Q8N831 410 aa10.65□□□□□ -0.7
PSEN1-209ENST00000553855 CNKSR1Q969H4 720 aa10.65□□□□□ -0.7
PSEN1-209ENST00000553855 TMX4Q9H1E5 349 aaPredicted RBP10.65□□□□□ -0.7
PSEN1-209ENST00000553855 RNF123Q5XPI4 1314 aa10.64□□□□□ -0.71
PSEN1-209ENST00000553855 YBX3P16989 372 aaKnown RBP eCLIP10.64□□□□□ -0.71
PSEN1-209ENST00000553855 SUSD4Q5VX71 490 aa10.64□□□□□ -0.71
PSEN1-209ENST00000553855 LRP10Q7Z4F1 713 aa10.64□□□□□ -0.71
PSEN1-209ENST00000553855 MASTLQ96GX5 879 aa10.64□□□□□ -0.71
PSEN1-209ENST00000553855 NLRP3Q96P20 1036 aa10.64□□□□□ -0.71
PSEN1-209ENST00000553855 PHAXQ9H814 394 aaKnown RBP10.64□□□□□ -0.71
PSEN1-209ENST00000553855 TRMT112Q9UI30 125 aaKnown RBP10.64□□□□□ -0.71
PSEN1-209ENST00000553855 BCORQ6W2J9 1755 aa10.64□□□□□ -0.71
PSEN1-209ENST00000553855 IBTKQ9P2D0 1353 aaPredicted RBP10.64□□□□□ -0.71
PSEN1-209ENST00000553855 GRXCR2A6NFK2 248 aa10.63□□□□□ -0.71
PSEN1-209ENST00000553855 TCERG1O14776 1098 aaKnown RBP10.63□□□□□ -0.71
PSEN1-209ENST00000553855 NPR1P16066 1061 aa10.63□□□□□ -0.71
PSEN1-209ENST00000553855 ALDH1B1P30837 517 aa10.63□□□□□ -0.71
PSEN1-209ENST00000553855 SOGA3Q5TF21 947 aa10.63□□□□□ -0.71
PSEN1-209ENST00000553855 STYK1Q6J9G0 422 aa10.63□□□□□ -0.71
PSEN1-209ENST00000553855 NUTM1Q86Y26 1132 aa10.63□□□□□ -0.71
PSEN1-209ENST00000553855 RPGRQ92834 1020 aaKnown RBP10.63□□□□□ -0.71
PSEN1-209ENST00000553855 SH3TC1Q8TE82 1336 aa10.62□□□□□ -0.71
PSEN1-209ENST00000553855 VAMP4O75379 141 aa10.62□□□□□ -0.71
PSEN1-209ENST00000553855 HNRNPUQ00839 825 aaKnown RBP eCLIP10.62□□□□□ -0.71
PSEN1-209ENST00000553855 FKBP5Q13451 457 aaPredicted RBP10.62□□□□□ -0.71
PSEN1-209ENST00000553855 ERFEQ4G0M1 354 aa10.62□□□□□ -0.71
PSEN1-209ENST00000553855 KSR2Q6VAB6 950 aa10.62□□□□□ -0.71
PSEN1-209ENST00000553855 NLRP10Q86W26 655 aa10.62□□□□□ -0.71
PSEN1-209ENST00000553855 HOMEZQ8IX15 550 aa10.62□□□□□ -0.71
PSEN1-209ENST00000553855 RBM17Q96I25 401 aaKnown RBP10.62□□□□□ -0.71
PSEN1-209ENST00000553855 MYD88Q99836 296 aa10.62□□□□□ -0.71
PSEN1-209ENST00000553855 UBN2Q6ZU65 1347 aa10.61□□□□□ -0.71
PSEN1-209ENST00000553855 ZNF521Q96K83 1311 aa10.61□□□□□ -0.71
PSEN1-209ENST00000553855 ATP5J2-PTCD1G3V325 749 aa10.61□□□□□ -0.71
PSEN1-209ENST00000553855 NTSR2O95665 410 aa10.61□□□□□ -0.71
PSEN1-209ENST00000553855 SRGNP10124 158 aa10.61□□□□□ -0.71
PSEN1-209ENST00000553855 KCNA3P22001 575 aa10.61□□□□□ -0.71
PSEN1-209ENST00000553855 SLFN5Q08AF3 891 aa10.61□□□□□ -0.71
PSEN1-209ENST00000553855 FLIIQ13045 1269 aa10.61□□□□□ -0.71
PSEN1-209ENST00000553855 ZNF428Q96B54 188 aa10.61□□□□□ -0.71
PSEN1-209ENST00000553855 MAP3K2Q9Y2U5 619 aa10.61□□□□□ -0.71
PSEN1-209ENST00000553855 KIF13BQ9NQT8 1826 aa10.61□□□□□ -0.71
PSEN1-209ENST00000553855 PI4KAP2A4QPH2 592 aa10.6□□□□□ -0.71
PSEN1-209ENST00000553855 MAP2K5Q13163 448 aa10.6□□□□□ -0.71
PSEN1-209ENST00000553855 TRIM28Q13263 835 aaKnown RBP10.6□□□□□ -0.71
Retrieved 100 of 20,778 RNA–protein pairs in 19.2 ms