RNA–Protein interactions for RNA: ENST00000553744.1

TMEM253-202, Transcript of transmembrane protein 253, humanhuman

TSL 3

Gene TMEM253, Length 195 nt, Biotype retained intron.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM253-202ENST00000553744 NOB1Q9ULX3 412 aaKnown RBP15.06■□□□□ 0
TMEM253-202ENST00000553744 SNED1Q8TER0 1413 aa15.06■□□□□ 0
TMEM253-202ENST00000553744 CTSWP56202 376 aa15.05■□□□□ -0
TMEM253-202ENST00000553744 CCDC152Q4G0S7 254 aa15.05■□□□□ -0
TMEM253-202ENST00000553744 OLFM4Q6UX06 510 aa15.05■□□□□ -0
TMEM253-202ENST00000553744 PLA2G12BQ9BX93 195 aa15.05■□□□□ -0
TMEM253-202ENST00000553744 LTBP3Q9NS15 1303 aa15.05■□□□□ -0
TMEM253-202ENST00000553744 COL4A1P02462 1669 aa15.04■□□□□ -0
TMEM253-202ENST00000553744 GRM8O00222 908 aa15.04■□□□□ -0
TMEM253-202ENST00000553744 HSPA6P17066 643 aa15.04■□□□□ -0
TMEM253-202ENST00000553744 PRELPP51888 382 aa15.04■□□□□ -0
TMEM253-202ENST00000553744 C9orf131Q5VYM1 1079 aa15.04■□□□□ -0
TMEM253-202ENST00000553744 CC2D2BQ6DHV5 1058 aa15.04■□□□□ -0
TMEM253-202ENST00000553744 RTKN2Q8IZC4 609 aa15.04■□□□□ -0
TMEM253-202ENST00000553744 API5Q9BZZ5 524 aaKnown RBP15.04■□□□□ -0
TMEM253-202ENST00000553744 TAOK3Q9H2K8 898 aa15.04■□□□□ -0
TMEM253-202ENST00000553744 BCAR3O75815 825 aa15.03■□□□□ -0
TMEM253-202ENST00000553744 BBOX1O75936 387 aa15.03■□□□□ -0
TMEM253-202ENST00000553744 LMNB1P20700 586 aa15.03■□□□□ -0
TMEM253-202ENST00000553744 SLC51AQ86UW1 340 aa15.03■□□□□ -0
TMEM253-202ENST00000553744 ARHGAP45Q92619 1136 aa15.03■□□□□ -0
TMEM253-202ENST00000553744 CELF1Q92879 486 aaKnown RBP15.03■□□□□ -0
TMEM253-202ENST00000553744 RNF181Q9P0P0 153 aa15.03■□□□□ -0
TMEM253-202ENST00000553744 ATP6V0A2Q9Y487 856 aa15.03■□□□□ -0
TMEM253-202ENST00000553744 MYH3P11055 1940 aa15.03■□□□□ -0
TMEM253-202ENST00000553744 LRRC37AA6NMS7 1700 aa15.03■□□□□ -0
TMEM253-202ENST00000553744 RTL9Q8NET4 1388 aa15.02■□□□□ -0
TMEM253-202ENST00000553744 SBF1O95248 1867 aa15.02■□□□□ -0
TMEM253-202ENST00000553744 FKBP4Q02790 459 aaKnown RBP eCLIP15.02■□□□□ -0
TMEM253-202ENST00000553744 GRIPAP1Q4V328 841 aa15.02■□□□□ -0
TMEM253-202ENST00000553744 TMC4Q7Z404 712 aa15.02■□□□□ -0
TMEM253-202ENST00000553744 TTLL11Q8NHH1 800 aa15.02■□□□□ -0
TMEM253-202ENST00000553744 CCDC85AQ96PX6 553 aaPredicted RBP15.02■□□□□ -0
TMEM253-202ENST00000553744 SEC31BQ9NQW1 1179 aa15.02■□□□□ -0
TMEM253-202ENST00000553744 C9orf78Q9NZ63 289 aaPredicted RBP15.02■□□□□ -0
TMEM253-202ENST00000553744 UTYO14607 1347 aa15.01□□□□□ -0.01
TMEM253-202ENST00000553744 SP8Q8IXZ3 490 aa15.01□□□□□ -0.01
TMEM253-202ENST00000553744 PSMD1Q99460 953 aa15.01□□□□□ -0.01
TMEM253-202ENST00000553744 TMX4Q9H1E5 349 aaPredicted RBP15.01□□□□□ -0.01
TMEM253-202ENST00000553744 TAF1P21675 1872 aa15.01□□□□□ -0.01
TMEM253-202ENST00000553744 TIAM2Q8IVF5 1701 aa15□□□□□ -0.01
TMEM253-202ENST00000553744 IPO8O15397 1037 aaKnown RBP15□□□□□ -0.01
TMEM253-202ENST00000553744 CCT4P50991 539 aaKnown RBP15□□□□□ -0.01
TMEM253-202ENST00000553744 GREM2Q9H772 168 aa15□□□□□ -0.01
TMEM253-202ENST00000553744 ZC3H4Q9UPT8 1303 aaKnown RBP14.99□□□□□ -0.01
TMEM253-202ENST00000553744 CSF1RP07333 972 aa14.99□□□□□ -0.01
TMEM253-202ENST00000553744 NBPF7P0C2Y1 421 aaPredicted RBP14.99□□□□□ -0.01
TMEM253-202ENST00000553744 TRIM27P14373 513 aa14.99□□□□□ -0.01
TMEM253-202ENST00000553744 RPS8P62241 208 aaKnown RBP14.99□□□□□ -0.01
TMEM253-202ENST00000553744 FOXO4P98177 505 aa14.99□□□□□ -0.01
TMEM253-202ENST00000553744 ATF7IPQ6VMQ6 1270 aa14.99□□□□□ -0.01
TMEM253-202ENST00000553744 FRAT1Q92837 279 aaPredicted RBP14.99□□□□□ -0.01
TMEM253-202ENST00000553744 CDC5LQ99459 802 aaKnown RBP14.99□□□□□ -0.01
TMEM253-202ENST00000553744 FAM161AQ3B820 660 aa14.98□□□□□ -0.01
TMEM253-202ENST00000553744 ANKRD18AQ8IVF6 992 aa14.98□□□□□ -0.01
TMEM253-202ENST00000553744 SUCLG2Q96I99 432 aa14.98□□□□□ -0.01
TMEM253-202ENST00000553744 GPBP1L1Q9HC44 474 aaPredicted RBP14.98□□□□□ -0.01
TMEM253-202ENST00000553744 ZNF277Q9NRM2 450 aaPredicted RBP14.98□□□□□ -0.01
TMEM253-202ENST00000553744 DUOX1Q9NRD9 1551 aa14.98□□□□□ -0.01
TMEM253-202ENST00000553744 ITGA6P23229 1130 aa14.97□□□□□ -0.01
TMEM253-202ENST00000553744 EPHA10Q5JZY3 1008 aa14.97□□□□□ -0.01
TMEM253-202ENST00000553744 ZKSCAN2Q63HK3 967 aa14.97□□□□□ -0.01
TMEM253-202ENST00000553744 DPP8Q6V1X1 898 aaPredicted RBP14.97□□□□□ -0.01
TMEM253-202ENST00000553744 MPNDQ8N594 471 aa14.97□□□□□ -0.01
TMEM253-202ENST00000553744 YTHDC1Q96MU7 727 aaKnown RBP14.97□□□□□ -0.01
TMEM253-202ENST00000553744 RTFDC1Q9BY42 306 aaPredicted RBP14.97□□□□□ -0.01
TMEM253-202ENST00000553744 USP44Q9H0E7 712 aa14.97□□□□□ -0.01
TMEM253-202ENST00000553744 CCDC88AQ3V6T2 1871 aa14.97□□□□□ -0.01
TMEM253-202ENST00000553744 DICER1Q9UPY3 1922 aaKnown RBP14.96□□□□□ -0.01
TMEM253-202ENST00000553744 IARSP41252 1262 aaKnown RBP14.96□□□□□ -0.01
TMEM253-202ENST00000553744 LTBP1Q14766 1721 aa14.96□□□□□ -0.01
TMEM253-202ENST00000553744 INTS3Q68E01 1043 aaKnown RBP14.96□□□□□ -0.01
TMEM253-202ENST00000553744 LMBR1LQ6UX01 489 aa14.96□□□□□ -0.01
TMEM253-202ENST00000553744 KAZALD1Q96I82 304 aa14.96□□□□□ -0.01
TMEM253-202ENST00000553744 TNNQ9UQP3 1299 aa14.96□□□□□ -0.01
TMEM253-202ENST00000553744 SUPT20HQ8NEM7 779 aa14.95□□□□□ -0.02
TMEM253-202ENST00000553744 BICC1Q9H694 974 aaKnown RBP14.95□□□□□ -0.02
TMEM253-202ENST00000553744 BSDC1Q9NW68 430 aaPredicted RBP14.95□□□□□ -0.02
TMEM253-202ENST00000553744 CHMP3Q9Y3E7 222 aa14.95□□□□□ -0.02
TMEM253-202ENST00000553744 SPEF2Q9C093 1822 aa14.94□□□□□ -0.02
TMEM253-202ENST00000553744 COL4A5P29400 1685 aa14.94□□□□□ -0.02
TMEM253-202ENST00000553744 ANKRD18BA2A2Z9 1011 aa14.94□□□□□ -0.02
TMEM253-202ENST00000553744 IGHMBP2P38935 993 aaKnown RBP14.94□□□□□ -0.02
TMEM253-202ENST00000553744 GPSM2P81274 684 aa14.94□□□□□ -0.02
TMEM253-202ENST00000553744 IFIT5Q13325 482 aaKnown RBP14.94□□□□□ -0.02
TMEM253-202ENST00000553744 RABL6Q3YEC7 729 aaPredicted RBP14.94□□□□□ -0.02
TMEM253-202ENST00000553744 CLUAP1Q96AJ1 413 aa14.94□□□□□ -0.02
TMEM253-202ENST00000553744 NSFL1CQ9UNZ2 370 aaKnown RBP14.94□□□□□ -0.02
TMEM253-202ENST00000553744 UBTFL1P0CB47 393 aaPredicted RBP14.93□□□□□ -0.02
TMEM253-202ENST00000553744 DNAJC5GQ8N7S2 189 aa14.93□□□□□ -0.02
TMEM253-202ENST00000553744 ANKRD44Q8N8A2 993 aa14.93□□□□□ -0.02
TMEM253-202ENST00000553744 ZNF526Q8TF50 670 aaPredicted RBP14.93□□□□□ -0.02
TMEM253-202ENST00000553744 VPS33BQ9H267 617 aa14.93□□□□□ -0.02
TMEM253-202ENST00000553744 PODXL2Q9NZ53 605 aa14.93□□□□□ -0.02
TMEM253-202ENST00000553744 RCAN3Q9UKA8 241 aa14.93□□□□□ -0.02
TMEM253-202ENST00000553744 KIF3CO14782 793 aa14.92□□□□□ -0.02
TMEM253-202ENST00000553744 PPIP5K2O43314 1243 aa14.92□□□□□ -0.02
TMEM253-202ENST00000553744 AOC3Q16853 763 aa14.92□□□□□ -0.02
TMEM253-202ENST00000553744 CCDC57Q2TAC2 916 aa14.92□□□□□ -0.02
TMEM253-202ENST00000553744 FTSJ3Q8IY81 847 aaKnown RBP14.92□□□□□ -0.02
Retrieved 100 of 20,778 RNA–protein pairs in 23.5 ms