RNA–Protein interactions for RNA: ENST00000553683.1

VRK1-202, Transcript of vaccinia related kinase 1, humanhuman

TSL 3

Gene VRK1, Length 247 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VRK1-202ENST00000553683 CMTR1Q8N1G2 835 aaKnown RBP6.38□□□□□ -1.39
VRK1-202ENST00000553683 CCER1Q8TC90 406 aaPredicted RBP6.38□□□□□ -1.39
VRK1-202ENST00000553683 TRPM4Q8TD43 1214 aa6.38□□□□□ -1.39
VRK1-202ENST00000553683 GNEQ9Y223 722 aaKnown RBP6.38□□□□□ -1.39
VRK1-202ENST00000553683 GNB5O14775 395 aa6.37□□□□□ -1.39
VRK1-202ENST00000553683 NFKB1P19838 968 aa6.37□□□□□ -1.39
VRK1-202ENST00000553683 MZF1P28698 734 aaPredicted RBP6.37□□□□□ -1.39
VRK1-202ENST00000553683 NRLP54845 237 aa6.37□□□□□ -1.39
VRK1-202ENST00000553683 GPLD1P80108 840 aa6.37□□□□□ -1.39
VRK1-202ENST00000553683 LINC00114Q6XXX2 140 aa6.37□□□□□ -1.39
VRK1-202ENST00000553683 TLR7Q9NYK1 1049 aaKnown RBP6.37□□□□□ -1.39
VRK1-202ENST00000553683 FRRS1LQ9P0K9 344 aa6.37□□□□□ -1.39
VRK1-202ENST00000553683 CARNS1A5YM72 827 aa6.36□□□□□ -1.39
VRK1-202ENST00000553683 PATL2C9JE40 543 aaKnown RBP6.36□□□□□ -1.39
VRK1-202ENST00000553683 ZBTB39O15060 712 aa6.36□□□□□ -1.39
VRK1-202ENST00000553683 ICMTO60725 284 aa6.36□□□□□ -1.39
VRK1-202ENST00000553683 RARAP10276 462 aa6.36□□□□□ -1.39
VRK1-202ENST00000553683 EIF1AXP47813 144 aaKnown RBP6.36□□□□□ -1.39
VRK1-202ENST00000553683 EHHADHQ08426 723 aa6.36□□□□□ -1.39
VRK1-202ENST00000553683 DHX32Q7L7V1 743 aaKnown RBP6.36□□□□□ -1.39
VRK1-202ENST00000553683 TTC9Q92623 222 aa6.36□□□□□ -1.39
VRK1-202ENST00000553683 UBE2OQ9C0C9 1292 aaKnown RBP6.36□□□□□ -1.39
VRK1-202ENST00000553683 NOP53Q9NZM5 478 aaKnown RBP6.36□□□□□ -1.39
VRK1-202ENST00000553683 ZFATQ9P243 1243 aa6.36□□□□□ -1.39
VRK1-202ENST00000553683 UBAP1LF5GYI3 381 aa6.35□□□□□ -1.39
VRK1-202ENST00000553683 SASH3O75995 380 aa6.35□□□□□ -1.39
VRK1-202ENST00000553683 MPSTP25325 297 aa6.35□□□□□ -1.39
VRK1-202ENST00000553683 TARSP26639 723 aaKnown RBP6.35□□□□□ -1.39
VRK1-202ENST00000553683 PLAURQ03405 335 aa6.35□□□□□ -1.39
VRK1-202ENST00000553683 TRIP4Q15650 581 aaPredicted RBP6.35□□□□□ -1.39
VRK1-202ENST00000553683 C20orf204Q6ZNR8 217 aa6.35□□□□□ -1.39
VRK1-202ENST00000553683 RAB44Q7Z6P3 723 aaPredicted RBP6.35□□□□□ -1.39
VRK1-202ENST00000553683 TRAIPQ9BWF2 469 aa6.35□□□□□ -1.39
VRK1-202ENST00000553683 RRAGCQ9HB90 399 aa6.35□□□□□ -1.39
VRK1-202ENST00000553683 DNAJB12Q9NXW2 375 aaKnown RBP6.35□□□□□ -1.39
VRK1-202ENST00000553683 SLC6A14Q9UN76 642 aa6.35□□□□□ -1.39
VRK1-202ENST00000553683 STARD13Q9Y3M8 1113 aa6.35□□□□□ -1.39
VRK1-202ENST00000553683 SPDYE3A6NKU9 549 aa6.34□□□□□ -1.39
VRK1-202ENST00000553683 PSAPP07602 524 aa6.34□□□□□ -1.39
VRK1-202ENST00000553683 SNRPNP63162 240 aaKnown RBP6.34□□□□□ -1.39
VRK1-202ENST00000553683 MICALL1Q8N3F8 863 aa6.34□□□□□ -1.39
VRK1-202ENST00000553683 GPR152Q8TDT2 470 aa6.34□□□□□ -1.39
VRK1-202ENST00000553683 CNTNAP5Q8WYK1 1306 aa6.33□□□□□ -1.4
VRK1-202ENST00000553683 PDGFAP04085 211 aa6.33□□□□□ -1.4
VRK1-202ENST00000553683 SCNN1AP37088 669 aa6.33□□□□□ -1.4
VRK1-202ENST00000553683 GSK3AP49840 483 aa6.33□□□□□ -1.4
VRK1-202ENST00000553683 RASSF7Q02833 373 aa6.33□□□□□ -1.4
VRK1-202ENST00000553683 CACTIN-AS1Q8N1I8 211 aa6.33□□□□□ -1.4
VRK1-202ENST00000553683 TTC16Q8NEE8 873 aa6.33□□□□□ -1.4
VRK1-202ENST00000553683 OR13H1Q8NG92 308 aa6.33□□□□□ -1.4
VRK1-202ENST00000553683 PMEPA1Q969W9 287 aa6.33□□□□□ -1.4
VRK1-202ENST00000553683 NUDT16Q96DE0 195 aaKnown RBP6.33□□□□□ -1.4
VRK1-202ENST00000553683 CITED4Q96RK1 184 aa6.33□□□□□ -1.4
VRK1-202ENST00000553683 M0R082 166 aa6.32□□□□□ -1.4
VRK1-202ENST00000553683 MMP20O60882 483 aa6.32□□□□□ -1.4
VRK1-202ENST00000553683 LILRB5O75023 590 aa6.32□□□□□ -1.4
VRK1-202ENST00000553683 ABL1P00519 1130 aa6.32□□□□□ -1.4
VRK1-202ENST00000553683 KCNA1Q09470 495 aa6.32□□□□□ -1.4
VRK1-202ENST00000553683 TTC39BQ5VTQ0 682 aaPredicted RBP6.32□□□□□ -1.4
VRK1-202ENST00000553683 TMEM151AQ8N4L1 468 aa6.32□□□□□ -1.4
VRK1-202ENST00000553683 ZNF417Q8TAU3 575 aa6.32□□□□□ -1.4
VRK1-202ENST00000553683 EDEM1Q92611 657 aa6.32□□□□□ -1.4
VRK1-202ENST00000553683 ZNF587Q96SQ5 575 aaPredicted RBP6.32□□□□□ -1.4
VRK1-202ENST00000553683 ABI2Q9NYB9 513 aaPredicted RBP6.32□□□□□ -1.4
VRK1-202ENST00000553683 USP20Q9Y2K6 914 aa6.32□□□□□ -1.4
VRK1-202ENST00000553683 ZBTB42B2RXF5 422 aa6.31□□□□□ -1.4
VRK1-202ENST00000553683 FZD6O60353 706 aa6.31□□□□□ -1.4
VRK1-202ENST00000553683 ALBP02768 609 aa6.31□□□□□ -1.4
VRK1-202ENST00000553683 IRS1P35568 1242 aa6.31□□□□□ -1.4
VRK1-202ENST00000553683 ECM1Q16610 540 aa6.31□□□□□ -1.4
VRK1-202ENST00000553683 KRT25Q7Z3Z0 450 aa6.31□□□□□ -1.4
VRK1-202ENST00000553683 FAM35AQ86V20 835 aa6.31□□□□□ -1.4
VRK1-202ENST00000553683 GLYCTKQ8IVS8 523 aa6.31□□□□□ -1.4
VRK1-202ENST00000553683 ELP3Q9H9T3 547 aa6.31□□□□□ -1.4
VRK1-202ENST00000553683 LOC102724428A0A0B4J2F2 783 aa6.3□□□□□ -1.4
VRK1-202ENST00000553683 RGS9O75916 674 aaPredicted RBP6.3□□□□□ -1.4
VRK1-202ENST00000553683 KIF4AO95239 1232 aa6.3□□□□□ -1.4
VRK1-202ENST00000553683 GDF11O95390 407 aa6.3□□□□□ -1.4
VRK1-202ENST00000553683 SERPINB4P48594 390 aa6.3□□□□□ -1.4
VRK1-202ENST00000553683 SIK1P57059 783 aa6.3□□□□□ -1.4
VRK1-202ENST00000553683 DNM1Q05193 864 aaKnown RBP6.3□□□□□ -1.4
VRK1-202ENST00000553683 MTMR3Q13615 1198 aa6.3□□□□□ -1.4
VRK1-202ENST00000553683 COL9A3Q14050 684 aaPredicted RBP6.3□□□□□ -1.4
VRK1-202ENST00000553683 PSAPL1Q6NUJ1 521 aa6.3□□□□□ -1.4
VRK1-202ENST00000553683 ILDR2Q71H61 639 aa6.3□□□□□ -1.4
VRK1-202ENST00000553683 ZNF438Q7Z4V0 828 aa6.3□□□□□ -1.4
VRK1-202ENST00000553683 ATCAYQ86WG3 371 aa6.3□□□□□ -1.4
VRK1-202ENST00000553683 GJD3Q8N144 294 aa6.3□□□□□ -1.4
VRK1-202ENST00000553683 RBSNQ9H1K0 784 aa6.3□□□□□ -1.4
VRK1-202ENST00000553683 H3BRB1 525 aa6.29□□□□□ -1.4
VRK1-202ENST00000553683 NID1P14543 1247 aa6.29□□□□□ -1.4
VRK1-202ENST00000553683 ARHGAP4P98171 946 aa6.29□□□□□ -1.4
VRK1-202ENST00000553683 HYAL2Q12891 473 aa6.29□□□□□ -1.4
VRK1-202ENST00000553683 PDE3BQ13370 1112 aa6.29□□□□□ -1.4
VRK1-202ENST00000553683 ZNF211Q13398 564 aaPredicted RBP6.29□□□□□ -1.4
VRK1-202ENST00000553683 AAMPQ13685 434 aa6.29□□□□□ -1.4
VRK1-202ENST00000553683 LPIN3Q9BQK8 851 aa6.29□□□□□ -1.4
VRK1-202ENST00000553683 IGFLR1Q9H665 355 aa6.29□□□□□ -1.4
VRK1-202ENST00000553683 TUT1Q9H6E5 874 aaKnown RBP6.29□□□□□ -1.4
VRK1-202ENST00000553683 NAGPAQ9UK23 515 aa6.29□□□□□ -1.4
Retrieved 100 of 20,778 RNA–protein pairs in 11.5 ms