RNA–Protein interactions for RNA: ENST00000553656.5

TUBB3-202, Transcript of tubulin beta 3 class III, humanhuman

TSL 4

Gene TUBB3, Length 550 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TUBB3-202ENST00000553656 PLA2G12BQ9BX93 195 aa17.42■□□□□ 0.38
TUBB3-202ENST00000553656 TMX4Q9H1E5 349 aaPredicted RBP17.42■□□□□ 0.38
TUBB3-202ENST00000553656 TNNQ9UQP3 1299 aa17.42■□□□□ 0.38
TUBB3-202ENST00000553656 NBPF7P0C2Y1 421 aaPredicted RBP17.41■□□□□ 0.38
TUBB3-202ENST00000553656 UBTFL1P0CB47 393 aaPredicted RBP17.41■□□□□ 0.38
TUBB3-202ENST00000553656 TMEM57Q8N5G2 664 aa17.41■□□□□ 0.38
TUBB3-202ENST00000553656 CCDC85AQ96PX6 553 aaPredicted RBP17.41■□□□□ 0.38
TUBB3-202ENST00000553656 UTYO14607 1347 aa17.41■□□□□ 0.38
TUBB3-202ENST00000553656 CACNA1SQ13698 1873 aa17.4■□□□□ 0.38
TUBB3-202ENST00000553656 GRAPQ13588 217 aa17.4■□□□□ 0.38
TUBB3-202ENST00000553656 SOGA3Q5TF21 947 aa17.4■□□□□ 0.38
TUBB3-202ENST00000553656 ITPRIPQ8IWB1 547 aa17.4■□□□□ 0.38
TUBB3-202ENST00000553656 GRAPLQ8TC17 118 aaPredicted RBP17.4■□□□□ 0.38
TUBB3-202ENST00000553656 USP44Q9H0E7 712 aa17.4■□□□□ 0.38
TUBB3-202ENST00000553656 ZNF219Q9P2Y4 722 aaPredicted RBP17.4■□□□□ 0.38
TUBB3-202ENST00000553656 CHMP3Q9Y3E7 222 aa17.4■□□□□ 0.38
TUBB3-202ENST00000553656 MYH3P11055 1940 aa17.39■□□□□ 0.37
TUBB3-202ENST00000553656 PPEF1O14829 653 aaPredicted RBP17.39■□□□□ 0.37
TUBB3-202ENST00000553656 GNAI3P08754 354 aa17.39■□□□□ 0.37
TUBB3-202ENST00000553656 TTLL11Q8NHH1 800 aa17.39■□□□□ 0.37
TUBB3-202ENST00000553656 CDC5LQ99459 802 aaKnown RBP17.39■□□□□ 0.37
TUBB3-202ENST00000553656 ARFGEF1Q9Y6D6 1849 aa17.39■□□□□ 0.37
TUBB3-202ENST00000553656 C21orf2O43822 256 aa17.38■□□□□ 0.37
TUBB3-202ENST00000553656 PLIN1O60240 522 aa17.38■□□□□ 0.37
TUBB3-202ENST00000553656 BBOX1O75936 387 aa17.38■□□□□ 0.37
TUBB3-202ENST00000553656 ARHGAP27Q6ZUM4 889 aa17.38■□□□□ 0.37
TUBB3-202ENST00000553656 SUCLG2Q96I99 432 aa17.38■□□□□ 0.37
TUBB3-202ENST00000553656 GREM2Q9H772 168 aa17.38■□□□□ 0.37
TUBB3-202ENST00000553656 RTL9Q8NET4 1388 aa17.38■□□□□ 0.37
TUBB3-202ENST00000553656 RLBP1P12271 317 aa17.37■□□□□ 0.37
TUBB3-202ENST00000553656 FOXO4P98177 505 aa17.37■□□□□ 0.37
TUBB3-202ENST00000553656 FAM161AQ3B820 660 aa17.37■□□□□ 0.37
TUBB3-202ENST00000553656 CCDC93Q567U6 631 aa17.37■□□□□ 0.37
TUBB3-202ENST00000553656 CC2D2BQ6DHV5 1058 aa17.37■□□□□ 0.37
TUBB3-202ENST00000553656 LMBR1LQ6UX01 489 aa17.37■□□□□ 0.37
TUBB3-202ENST00000553656 TMC4Q7Z404 712 aa17.37■□□□□ 0.37
TUBB3-202ENST00000553656 PANK1Q8TE04 598 aa17.37■□□□□ 0.37
TUBB3-202ENST00000553656 MEIS3Q99687 375 aa17.37■□□□□ 0.37
TUBB3-202ENST00000553656 SLX4Q8IY92 1834 aa17.37■□□□□ 0.37
TUBB3-202ENST00000553656 CSF1RP07333 972 aa17.36■□□□□ 0.37
TUBB3-202ENST00000553656 RPS8P62241 208 aaKnown RBP17.36■□□□□ 0.37
TUBB3-202ENST00000553656 IFIT5Q13325 482 aaKnown RBP17.36■□□□□ 0.37
TUBB3-202ENST00000553656 CCDC57Q2TAC2 916 aa17.36■□□□□ 0.37
TUBB3-202ENST00000553656 TAF7LQ5H9L4 462 aa17.36■□□□□ 0.37
TUBB3-202ENST00000553656 ANKRD18AQ8IVF6 992 aa17.36■□□□□ 0.37
TUBB3-202ENST00000553656 BICC1Q9H694 974 aaKnown RBP17.36■□□□□ 0.37
TUBB3-202ENST00000553656 SEC31BQ9NQW1 1179 aa17.36■□□□□ 0.37
TUBB3-202ENST00000553656 ANKRD18BA2A2Z9 1011 aa17.35■□□□□ 0.37
TUBB3-202ENST00000553656 ITGA6P23229 1130 aa17.35■□□□□ 0.37
TUBB3-202ENST00000553656 IGHMBP2P38935 993 aaKnown RBP17.35■□□□□ 0.37
TUBB3-202ENST00000553656 PDE3AQ14432 1141 aa17.35■□□□□ 0.37
TUBB3-202ENST00000553656 CELF1Q92879 486 aaKnown RBP17.35■□□□□ 0.37
TUBB3-202ENST00000553656 ATP6V0A2Q9Y487 856 aa17.35■□□□□ 0.37
TUBB3-202ENST00000553656 GNAI2P04899 355 aa17.34■□□□□ 0.37
TUBB3-202ENST00000553656 RRP1P56182 461 aaKnown RBP17.34■□□□□ 0.37
TUBB3-202ENST00000553656 GRIPAP1Q4V328 841 aa17.34■□□□□ 0.37
TUBB3-202ENST00000553656 EPHA10Q5JZY3 1008 aa17.34■□□□□ 0.37
TUBB3-202ENST00000553656 RTKN2Q8IZC4 609 aa17.34■□□□□ 0.37
TUBB3-202ENST00000553656 CHMP4BQ9H444 224 aaKnown RBP17.34■□□□□ 0.37
TUBB3-202ENST00000553656 LRRFIP2Q9Y608 721 aaKnown RBP17.34■□□□□ 0.37
TUBB3-202ENST00000553656 MVPQ14764 893 aaKnown RBP17.33■□□□□ 0.36
TUBB3-202ENST00000553656 RABL6Q3YEC7 729 aaPredicted RBP17.33■□□□□ 0.36
TUBB3-202ENST00000553656 SP8Q8IXZ3 490 aa17.33■□□□□ 0.36
TUBB3-202ENST00000553656 C7orf43Q8WVR3 580 aa17.33■□□□□ 0.36
TUBB3-202ENST00000553656 KAZALD1Q96I82 304 aa17.33■□□□□ 0.36
TUBB3-202ENST00000553656 MPHOSPH8Q99549 860 aa17.33■□□□□ 0.36
TUBB3-202ENST00000553656 DDX19BQ9UMR2 479 aa17.33■□□□□ 0.36
TUBB3-202ENST00000553656 COG6Q9Y2V7 657 aa17.33■□□□□ 0.36
TUBB3-202ENST00000553656 TAOK3Q9H2K8 898 aa17.32■□□□□ 0.36
TUBB3-202ENST00000553656 ANKRD44Q8N8A2 993 aa17.31■□□□□ 0.36
TUBB3-202ENST00000553656 TAF1P21675 1872 aa17.31■□□□□ 0.36
TUBB3-202ENST00000553656 ZBTB7BO15156 539 aaPredicted RBP17.3■□□□□ 0.36
TUBB3-202ENST00000553656 OLFM4Q6UX06 510 aa17.3■□□□□ 0.36
TUBB3-202ENST00000553656 DPP8Q6V1X1 898 aaPredicted RBP17.3■□□□□ 0.36
TUBB3-202ENST00000553656 FKBP4Q02790 459 aaKnown RBP eCLIP17.29■□□□□ 0.362e-6■■■■□ 22.8
TUBB3-202ENST00000553656 RASSF7Q02833 373 aa17.29■□□□□ 0.36
TUBB3-202ENST00000553656 C20orf194Q5TEA3 1177 aa17.29■□□□□ 0.36
TUBB3-202ENST00000553656 MPNDQ8N594 471 aa17.29■□□□□ 0.36
TUBB3-202ENST00000553656 BSDC1Q9NW68 430 aaPredicted RBP17.29■□□□□ 0.36
TUBB3-202ENST00000553656 LTBP3Q9NS15 1303 aa17.28■□□□□ 0.36
TUBB3-202ENST00000553656 NFKBIEO00221 500 aa17.28■□□□□ 0.36
TUBB3-202ENST00000553656 SUPT20HQ8NEM7 779 aa17.28■□□□□ 0.36
TUBB3-202ENST00000553656 CNNM1Q9NRU3 951 aa17.28■□□□□ 0.36
TUBB3-202ENST00000553656 ANKIB1Q9P2G1 1089 aa17.28■□□□□ 0.36
TUBB3-202ENST00000553656 NSFL1CQ9UNZ2 370 aaKnown RBP17.28■□□□□ 0.36
TUBB3-202ENST00000553656 SPEF2Q9C093 1822 aa17.28■□□□□ 0.36
TUBB3-202ENST00000553656 LRRC37AA6NMS7 1700 aa17.27■□□□□ 0.36
TUBB3-202ENST00000553656 FER1L6Q2WGJ9 1857 aa17.27■□□□□ 0.36
TUBB3-202ENST00000553656 COL4A1P02462 1669 aa17.27■□□□□ 0.36
TUBB3-202ENST00000553656 LMNB1P20700 586 aa17.27■□□□□ 0.36
TUBB3-202ENST00000553656 LDHAL6AQ6ZMR3 332 aa17.27■□□□□ 0.36
TUBB3-202ENST00000553656 PSMD1Q99460 953 aa17.27■□□□□ 0.36
TUBB3-202ENST00000553656 C1orf115Q9H7X2 142 aa17.27■□□□□ 0.36
TUBB3-202ENST00000553656 SRGAP3O43295 1099 aa17.26■□□□□ 0.35
TUBB3-202ENST00000553656 ZNF594Q96JF6 807 aaPredicted RBP17.26■□□□□ 0.35
TUBB3-202ENST00000553656 ANKRD2Q9GZV1 360 aa17.26■□□□□ 0.35
TUBB3-202ENST00000553656 RNF181Q9P0P0 153 aa17.26■□□□□ 0.35
TUBB3-202ENST00000553656 SUPT16HQ9Y5B9 1047 aaKnown RBP17.26■□□□□ 0.35
TUBB3-202ENST00000553656 XDHP47989 1333 aa17.25■□□□□ 0.35
TUBB3-202ENST00000553656 C6orf229H3BNL8 230 aa17.25■□□□□ 0.35
Retrieved 100 of 20,778 RNA–protein pairs in 133.5 ms