RNA–Protein interactions for RNA: ENST00000553649.2

SMARCE1P3-201, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily e, member 1 pseudogene 3, humanhuman

BASIC

Gene SMARCE1P3, Length 1,231 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCE1P3-201ENST00000553649 SLC27A3Q5K4L6 730 aa8.17□□□□□ -1.1
SMARCE1P3-201ENST00000553649 TOM1L2Q6ZVM7 507 aa8.17□□□□□ -1.1
SMARCE1P3-201ENST00000553649 SPIRE2Q8WWL2 714 aa8.17□□□□□ -1.1
SMARCE1P3-201ENST00000553649 TRPM1Q7Z4N2 1603 aa8.17□□□□□ -1.1
SMARCE1P3-201ENST00000553649 GCP02774 474 aa8.16□□□□□ -1.1
SMARCE1P3-201ENST00000553649 KCNQ4P56696 695 aa8.16□□□□□ -1.1
SMARCE1P3-201ENST00000553649 SMC1BQ8NDV3 1235 aa8.16□□□□□ -1.1
SMARCE1P3-201ENST00000553649 PRR7Q8TB68 274 aa8.16□□□□□ -1.1
SMARCE1P3-201ENST00000553649 ITPKCQ96DU7 683 aa8.16□□□□□ -1.1
SMARCE1P3-201ENST00000553649 WNK3Q9BYP7 1800 aa8.16□□□□□ -1.1
SMARCE1P3-201ENST00000553649 SLIT3O75094 1523 aa8.15□□□□□ -1.1
SMARCE1P3-201ENST00000553649 PXDNLA1KZ92 1463 aa8.15□□□□□ -1.1
SMARCE1P3-201ENST00000553649 WDR17Q8IZU2 1322 aa8.15□□□□□ -1.1
SMARCE1P3-201ENST00000553649 MOXD2PA6NHM9 499 aa8.15□□□□□ -1.1
SMARCE1P3-201ENST00000553649 EXOC5O00471 708 aa8.15□□□□□ -1.1
SMARCE1P3-201ENST00000553649 NR3C2P08235 984 aa8.15□□□□□ -1.1
SMARCE1P3-201ENST00000553649 C6orf118Q5T5N4 469 aa8.15□□□□□ -1.1
SMARCE1P3-201ENST00000553649 GPR161Q8N6U8 529 aaKnown RBP8.15□□□□□ -1.1
SMARCE1P3-201ENST00000553649 CDK15Q96Q40 435 aa8.15□□□□□ -1.1
SMARCE1P3-201ENST00000553649 KCPQ6ZWJ8 1503 aa8.14□□□□□ -1.11
SMARCE1P3-201ENST00000553649 ZIC2O95409 532 aaPredicted RBP8.14□□□□□ -1.11
SMARCE1P3-201ENST00000553649 PRKCSHP14314 528 aaPredicted RBP8.14□□□□□ -1.11
SMARCE1P3-201ENST00000553649 FOXJ1Q92949 421 aa8.14□□□□□ -1.11
SMARCE1P3-201ENST00000553649 TUBGCP6Q96RT7 1819 aa8.14□□□□□ -1.11
SMARCE1P3-201ENST00000553649 AKAP12Q02952 1782 aa8.14□□□□□ -1.11
SMARCE1P3-201ENST00000553649 ABCC6O95255 1503 aa8.13□□□□□ -1.11
SMARCE1P3-201ENST00000553649 COL18A1P39060 1754 aa8.13□□□□□ -1.11
SMARCE1P3-201ENST00000553649 ITSN1Q15811 1721 aa8.13□□□□□ -1.11
SMARCE1P3-201ENST00000553649 CCDC85CA6NKD9 419 aa8.13□□□□□ -1.11
SMARCE1P3-201ENST00000553649 MAN1A2O60476 641 aa8.13□□□□□ -1.11
SMARCE1P3-201ENST00000553649 CTCFP49711 727 aaPredicted RBP8.13□□□□□ -1.11
SMARCE1P3-201ENST00000553649 RRAGCQ9HB90 399 aa8.13□□□□□ -1.11
SMARCE1P3-201ENST00000553649 GRM5P41594 1212 aa8.12□□□□□ -1.11
SMARCE1P3-201ENST00000553649 LBX1P52954 281 aa8.12□□□□□ -1.11
SMARCE1P3-201ENST00000553649 RASSF7Q02833 373 aa8.12□□□□□ -1.11
SMARCE1P3-201ENST00000553649 C4orf48Q5BLP8 95 aa8.12□□□□□ -1.11
SMARCE1P3-201ENST00000553649 DESI1Q6ICB0 168 aa8.12□□□□□ -1.11
SMARCE1P3-201ENST00000553649 ABTB2Q8N961 1025 aa8.12□□□□□ -1.11
SMARCE1P3-201ENST00000553649 DCAF11Q8TEB1 546 aa8.12□□□□□ -1.11
SMARCE1P3-201ENST00000553649 NUDT16Q96DE0 195 aaKnown RBP8.12□□□□□ -1.11
SMARCE1P3-201ENST00000553649 CARD10Q9BWT7 1032 aa8.12□□□□□ -1.11
SMARCE1P3-201ENST00000553649 MKRN1Q9UHC7 482 aaKnown RBP8.12□□□□□ -1.11
SMARCE1P3-201ENST00000553649 BTAF1O14981 1849 aa8.12□□□□□ -1.11
SMARCE1P3-201ENST00000553649 PLEKHG2Q9H7P9 1386 aa8.11□□□□□ -1.11
SMARCE1P3-201ENST00000553649 ACEP12821 1306 aa8.11□□□□□ -1.11
SMARCE1P3-201ENST00000553649 ZBTB7CA1YPR0 619 aa8.11□□□□□ -1.11
SMARCE1P3-201ENST00000553649 C9orf131Q5VYM1 1079 aa8.11□□□□□ -1.11
SMARCE1P3-201ENST00000553649 NLRP13Q86W25 1043 aa8.11□□□□□ -1.11
SMARCE1P3-201ENST00000553649 TMEM151AQ8N4L1 468 aa8.11□□□□□ -1.11
SMARCE1P3-201ENST00000553649 FAM174AQ8TBP5 190 aa8.11□□□□□ -1.11
SMARCE1P3-201ENST00000553649 DNMT3LQ9UJW3 386 aa8.11□□□□□ -1.11
SMARCE1P3-201ENST00000553649 KDM2BQ8NHM5 1336 aa8.1□□□□□ -1.11
SMARCE1P3-201ENST00000553649 GDF11O95390 407 aa8.1□□□□□ -1.11
SMARCE1P3-201ENST00000553649 SSTR3P32745 418 aaPredicted RBP8.1□□□□□ -1.11
SMARCE1P3-201ENST00000553649 ARID5BQ14865 1188 aa8.1□□□□□ -1.11
SMARCE1P3-201ENST00000553649 DHX30Q7L2E3 1194 aaKnown RBP eCLIP8.1□□□□□ -1.11
SMARCE1P3-201ENST00000553649 ADAMTS8Q9UP79 889 aa8.1□□□□□ -1.11
SMARCE1P3-201ENST00000553649 CPSF1Q10570 1443 aaKnown RBP8.1□□□□□ -1.11
SMARCE1P3-201ENST00000553649 CCDC7Q96M83 1385 aa8.1□□□□□ -1.11
SMARCE1P3-201ENST00000553649 HSPA8P11142 646 aaKnown RBP8.09□□□□□ -1.11
SMARCE1P3-201ENST00000553649 MTMR2Q13614 643 aa8.09□□□□□ -1.11
SMARCE1P3-201ENST00000553649 LYPD8Q6UX82 237 aa8.09□□□□□ -1.11
SMARCE1P3-201ENST00000553649 ARHGAP27Q6ZUM4 889 aa8.09□□□□□ -1.11
SMARCE1P3-201ENST00000553649 PPIP5K1Q6PFW1 1433 aa8.09□□□□□ -1.11
SMARCE1P3-201ENST00000553649 TNRC18O15417 2968 aaPredicted RBP8.08□□□□□ -1.12
SMARCE1P3-201ENST00000553649 LINC00528Q8N1L1 170 aa8.08□□□□□ -1.12
SMARCE1P3-201ENST00000553649 MEIOBQ8N635 442 aa8.08□□□□□ -1.12
SMARCE1P3-201ENST00000553649 AIDAQ96BJ3 306 aa8.08□□□□□ -1.12
SMARCE1P3-201ENST00000553649 CNTNAP3BQ96NU0 1288 aa8.08□□□□□ -1.12
SMARCE1P3-201ENST00000553649 CDK19Q9BWU1 502 aa8.08□□□□□ -1.12
SMARCE1P3-201ENST00000553649 CNTNAP3Q9BZ76 1288 aa8.08□□□□□ -1.12
SMARCE1P3-201ENST00000553649 MAP10Q9P2G4 905 aa8.08□□□□□ -1.12
SMARCE1P3-201ENST00000553649 CFAP99D6REC4 459 aa8.07□□□□□ -1.12
SMARCE1P3-201ENST00000553649 F12P00748 615 aaPredicted RBP8.07□□□□□ -1.12
SMARCE1P3-201ENST00000553649 BMP2P12643 396 aa8.07□□□□□ -1.12
SMARCE1P3-201ENST00000553649 CTHP32929 405 aa8.07□□□□□ -1.12
SMARCE1P3-201ENST00000553649 NR5A1Q13285 461 aa8.07□□□□□ -1.12
SMARCE1P3-201ENST00000553649 ARHGEF25Q86VW2 580 aa8.07□□□□□ -1.12
SMARCE1P3-201ENST00000553649 BCS1LQ9Y276 419 aa8.07□□□□□ -1.12
SMARCE1P3-201ENST00000553649 NSD2O96028 1365 aa8.07□□□□□ -1.12
SMARCE1P3-201ENST00000553649 CNTNAP1P78357 1384 aa8.07□□□□□ -1.12
SMARCE1P3-201ENST00000553649 RAB3GAP2Q9H2M9 1393 aa8.07□□□□□ -1.12
SMARCE1P3-201ENST00000553649 QRICH2Q9H0J4 1663 aa8.06□□□□□ -1.12
SMARCE1P3-201ENST00000553649 SMIM5Q71RC9 77 aa8.06□□□□□ -1.12
SMARCE1P3-201ENST00000553649 AMIGO3Q86WK7 504 aa8.06□□□□□ -1.12
SMARCE1P3-201ENST00000553649 CCNL1Q9UK58 526 aaPredicted RBP8.06□□□□□ -1.12
SMARCE1P3-201ENST00000553649 PCDHB15Q9Y5E8 787 aa8.06□□□□□ -1.12
SMARCE1P3-201ENST00000553649 SPDYE5A6NIY4 337 aa8.05□□□□□ -1.12
SMARCE1P3-201ENST00000553649 CSB-PGBD3P0DP91 1061 aa8.05□□□□□ -1.12
SMARCE1P3-201ENST00000553649 SRPK2P78362 688 aaKnown RBP8.05□□□□□ -1.12
SMARCE1P3-201ENST00000553649 RNFT1Q5M7Z0 435 aa8.05□□□□□ -1.12
SMARCE1P3-201ENST00000553649 PRPF38BQ5VTL8 546 aaKnown RBP8.05□□□□□ -1.12
SMARCE1P3-201ENST00000553649 ZNF385CQ66K41 422 aaPredicted RBP8.05□□□□□ -1.12
SMARCE1P3-201ENST00000553649 KRI1Q8N9T8 703 aaKnown RBP8.05□□□□□ -1.12
SMARCE1P3-201ENST00000553649 TNRC6CQ9HCJ0 1690 aaKnown RBP8.05□□□□□ -1.12
SMARCE1P3-201ENST00000553649 TPRNQ4KMQ1 711 aa8.04□□□□□ -1.12
SMARCE1P3-201ENST00000553649 WHAMMQ8TF30 809 aa8.04□□□□□ -1.12
SMARCE1P3-201ENST00000553649 RNF181Q9P0P0 153 aa8.04□□□□□ -1.12
SMARCE1P3-201ENST00000553649 PIK3C2AO00443 1686 aa8.04□□□□□ -1.12
SMARCE1P3-201ENST00000553649 NFAT5O94916 1531 aa8.03□□□□□ -1.12
Retrieved 100 of 20,778 RNA–protein pairs in 44 ms