RNA–Protein interactions for RNA: ENST00000553548.5

SRSF5-204, Transcript of serine and arginine rich splicing factor 5, humanhuman

TSL 4 BASIC

Gene SRSF5, Length 526 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRSF5-204ENST00000553548 ZBTB40Q9NUA8 1239 aa12.44□□□□□ -0.42
SRSF5-204ENST00000553548 DDX19BQ9UMR2 479 aa12.44□□□□□ -0.42
SRSF5-204ENST00000553548 LRRFIP2Q9Y608 721 aaKnown RBP12.44□□□□□ -0.42
SRSF5-204ENST00000553548 COL4A1P02462 1669 aa12.43□□□□□ -0.42
SRSF5-204ENST00000553548 GNAI3P08754 354 aa12.43□□□□□ -0.42
SRSF5-204ENST00000553548 CTSWP56202 376 aa12.43□□□□□ -0.42
SRSF5-204ENST00000553548 LMBR1LQ6UX01 489 aa12.43□□□□□ -0.42
SRSF5-204ENST00000553548 C1orf115Q9H7X2 142 aa12.43□□□□□ -0.42
SRSF5-204ENST00000553548 COL11A2P13942 1736 aaPredicted RBP12.42□□□□□ -0.42
SRSF5-204ENST00000553548 TAF1P21675 1872 aa12.42□□□□□ -0.42
SRSF5-204ENST00000553548 H0YIN7 160 aa12.42□□□□□ -0.42
SRSF5-204ENST00000553548 HOXA10P31260 410 aaPredicted RBP12.42□□□□□ -0.42
SRSF5-204ENST00000553548 RABL6Q3YEC7 729 aaPredicted RBP12.42□□□□□ -0.42
SRSF5-204ENST00000553548 GREM2Q9H772 168 aa12.42□□□□□ -0.42
SRSF5-204ENST00000553548 SEC31BQ9NQW1 1179 aa12.42□□□□□ -0.42
SRSF5-204ENST00000553548 MYH3P11055 1940 aa12.41□□□□□ -0.42
SRSF5-204ENST00000553548 GNAI2P04899 355 aa12.41□□□□□ -0.42
SRSF5-204ENST00000553548 HSP90B1P14625 803 aaKnown RBP12.41□□□□□ -0.42
SRSF5-204ENST00000553548 NPR1P16066 1061 aa12.41□□□□□ -0.42
SRSF5-204ENST00000553548 EXOC6Q8TAG9 804 aa12.41□□□□□ -0.42
SRSF5-204ENST00000553548 MASTLQ96GX5 879 aa12.41□□□□□ -0.42
SRSF5-204ENST00000553548 FAM161AQ3B820 660 aa12.4□□□□□ -0.42
SRSF5-204ENST00000553548 CCDC152Q4G0S7 254 aa12.4□□□□□ -0.42
SRSF5-204ENST00000553548 STYK1Q6J9G0 422 aa12.4□□□□□ -0.42
SRSF5-204ENST00000553548 SLC51AQ86UW1 340 aa12.4□□□□□ -0.42
SRSF5-204ENST00000553548 RPGRQ92834 1020 aaKnown RBP12.4□□□□□ -0.42
SRSF5-204ENST00000553548 CELF1Q92879 486 aaKnown RBP12.4□□□□□ -0.42
SRSF5-204ENST00000553548 ZNF622Q969S3 477 aaKnown RBP eCLIP12.4□□□□□ -0.422e-8■□□□□ 11.3
SRSF5-204ENST00000553548 WWC3Q9ULE0 1092 aa12.4□□□□□ -0.42
SRSF5-204ENST00000553548 PDZRN3Q9UPQ7 1066 aa12.4□□□□□ -0.42
SRSF5-204ENST00000553548 GOLGB1Q14789 3259 aaKnown RBP12.4□□□□□ -0.42
SRSF5-204ENST00000553548 ITGA6P23229 1130 aa12.39□□□□□ -0.43
SRSF5-204ENST00000553548 RFX5P48382 616 aaPredicted RBP12.39□□□□□ -0.43
SRSF5-204ENST00000553548 RBM17Q96I25 401 aaKnown RBP12.39□□□□□ -0.43
SRSF5-204ENST00000553548 CRAMP1Q96RY5 1269 aa12.39□□□□□ -0.43
SRSF5-204ENST00000553548 RTL9Q8NET4 1388 aa12.39□□□□□ -0.43
SRSF5-204ENST00000553548 DLEC1Q9Y238 1755 aa12.38□□□□□ -0.43
SRSF5-204ENST00000553548 BRCA1P38398 1863 aaKnown RBP12.38□□□□□ -0.43
SRSF5-204ENST00000553548 PNMA6EA0A0J9YXQ4 647 aa12.38□□□□□ -0.43
SRSF5-204ENST00000553548 ATP8B2P98198 1209 aa12.38□□□□□ -0.43
SRSF5-204ENST00000553548 MTX1Q13505 466 aa12.38□□□□□ -0.43
SRSF5-204ENST00000553548 DDX46Q7L014 1031 aaKnown RBP12.38□□□□□ -0.43
SRSF5-204ENST00000553548 SIRT2Q8IXJ6 389 aa12.38□□□□□ -0.43
SRSF5-204ENST00000553548 ZNF594Q96JF6 807 aaPredicted RBP12.38□□□□□ -0.43
SRSF5-204ENST00000553548 PIM2Q9P1W9 311 aa12.38□□□□□ -0.43
SRSF5-204ENST00000553548 HDAC5Q9UQL6 1122 aa12.38□□□□□ -0.43
SRSF5-204ENST00000553548 CHMP3Q9Y3E7 222 aa12.38□□□□□ -0.43
SRSF5-204ENST00000553548 SLX4Q8IY92 1834 aa12.38□□□□□ -0.43
SRSF5-204ENST00000553548 ALDH1B1P30837 517 aa12.37□□□□□ -0.43
SRSF5-204ENST00000553548 RPS8P62241 208 aaKnown RBP12.37□□□□□ -0.43
SRSF5-204ENST00000553548 IFIT5Q13325 482 aaKnown RBP12.37□□□□□ -0.43
SRSF5-204ENST00000553548 GRAPQ13588 217 aa12.37□□□□□ -0.43
SRSF5-204ENST00000553548 PRPF40BQ6NWY9 871 aaKnown RBP12.37□□□□□ -0.43
SRSF5-204ENST00000553548 CEP85Q6P2H3 762 aa12.37□□□□□ -0.43
SRSF5-204ENST00000553548 OLFM4Q6UX06 510 aa12.37□□□□□ -0.43
SRSF5-204ENST00000553548 TTLL6Q8N841 843 aa12.37□□□□□ -0.43
SRSF5-204ENST00000553548 KLHDC4Q8TBB5 520 aa12.37□□□□□ -0.43
SRSF5-204ENST00000553548 GRAPLQ8TC17 118 aaPredicted RBP12.37□□□□□ -0.43
SRSF5-204ENST00000553548 C7orf43Q8WVR3 580 aa12.37□□□□□ -0.43
SRSF5-204ENST00000553548 CNKSR1Q969H4 720 aa12.37□□□□□ -0.43
SRSF5-204ENST00000553548 CHMP4BQ9H444 224 aaKnown RBP12.37□□□□□ -0.43
SRSF5-204ENST00000553548 PCDHB15Q9Y5E8 787 aa12.37□□□□□ -0.43
SRSF5-204ENST00000553548 ANKRD18BA2A2Z9 1011 aa12.36□□□□□ -0.43
SRSF5-204ENST00000553548 SRGAP3O43295 1099 aa12.36□□□□□ -0.43
SRSF5-204ENST00000553548 PTPN12Q05209 780 aaKnown RBP12.36□□□□□ -0.43
SRSF5-204ENST00000553548 POLA2Q14181 598 aa12.36□□□□□ -0.43
SRSF5-204ENST00000553548 CCDC57Q2TAC2 916 aa12.36□□□□□ -0.43
SRSF5-204ENST00000553548 BBOX1O75936 387 aa12.35□□□□□ -0.43
SRSF5-204ENST00000553548 DALRD3Q5D0E6 543 aaKnown RBP12.35□□□□□ -0.43
SRSF5-204ENST00000553548 RPAP2Q8IXW5 612 aaPredicted RBP12.35□□□□□ -0.43
SRSF5-204ENST00000553548 SSH3Q8TE77 659 aa12.35□□□□□ -0.43
SRSF5-204ENST00000553548 PUS3Q9BZE2 481 aaKnown RBP12.35□□□□□ -0.43
SRSF5-204ENST00000553548 ZNF219Q9P2Y4 722 aaPredicted RBP12.35□□□□□ -0.43
SRSF5-204ENST00000553548 PA2G4Q9UQ80 394 aaKnown RBP12.35□□□□□ -0.43
SRSF5-204ENST00000553548 BCS1LQ9Y276 419 aa12.35□□□□□ -0.43
SRSF5-204ENST00000553548 CACNA1SQ13698 1873 aa12.35□□□□□ -0.43
SRSF5-204ENST00000553548 PPEF1O14829 653 aaPredicted RBP12.34□□□□□ -0.43
SRSF5-204ENST00000553548 C21orf2O43822 256 aa12.34□□□□□ -0.43
SRSF5-204ENST00000553548 YBX3P16989 372 aaKnown RBP eCLIP12.34□□□□□ -0.43
SRSF5-204ENST00000553548 LRRC24Q50LG9 513 aa12.34□□□□□ -0.43
SRSF5-204ENST00000553548 ANKRD18AQ8IVF6 992 aa12.34□□□□□ -0.43
SRSF5-204ENST00000553548 CDC5LQ99459 802 aaKnown RBP12.34□□□□□ -0.43
SRSF5-204ENST00000553548 BSDC1Q9NW68 430 aaPredicted RBP12.34□□□□□ -0.43
SRSF5-204ENST00000553548 WTIPA6NIX2 430 aaPredicted RBP12.33□□□□□ -0.44
SRSF5-204ENST00000553548 LDHAL6AQ6ZMR3 332 aa12.33□□□□□ -0.44
SRSF5-204ENST00000553548 SP8Q8IXZ3 490 aa12.33□□□□□ -0.44
SRSF5-204ENST00000553548 COPRSQ9NQ92 184 aa12.33□□□□□ -0.44
SRSF5-204ENST00000553548 MINPP1Q9UNW1 487 aa12.33□□□□□ -0.44
SRSF5-204ENST00000553548 ATP6V0A2Q9Y487 856 aa12.33□□□□□ -0.44
SRSF5-204ENST00000553548 RIPOR2Q9Y4F9 1068 aa12.33□□□□□ -0.44
SRSF5-204ENST00000553548 SPEF2Q9C093 1822 aa12.32□□□□□ -0.44
SRSF5-204ENST00000553548 UTRNP46939 3433 aa12.32□□□□□ -0.44
SRSF5-204ENST00000553548 SNED1Q8TER0 1413 aa12.32□□□□□ -0.44
SRSF5-204ENST00000553548 IGHMBP2P38935 993 aaKnown RBP12.32□□□□□ -0.44
SRSF5-204ENST00000553548 AAMPQ13685 434 aa12.32□□□□□ -0.44
SRSF5-204ENST00000553548 ATG9AQ7Z3C6 839 aa12.32□□□□□ -0.44
SRSF5-204ENST00000553548 MPHOSPH8Q99549 860 aa12.32□□□□□ -0.44
SRSF5-204ENST00000553548 SIL1Q9H173 461 aa12.32□□□□□ -0.44
SRSF5-204ENST00000553548 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP12.32□□□□□ -0.44
SRSF5-204ENST00000553548 EYA2O00167 538 aa12.31□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 49.1 ms