RNA–Protein interactions for RNA: ENST00000553544.1

SRP54-203, Transcript of signal recognition particle 54, humanhuman

TSL 2

Gene SRP54, Length 491 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRP54-203ENST00000553544 NFE2L2Q16236 605 aa15.53■□□□□ 0.08
SRP54-203ENST00000553544 MPNDQ8N594 471 aa15.53■□□□□ 0.08
SRP54-203ENST00000553544 UTP14AQ9BVJ6 771 aaKnown RBP15.53■□□□□ 0.08
SRP54-203ENST00000553544 LAMB4A4D0S4 1761 aa15.53■□□□□ 0.08
SRP54-203ENST00000553544 LTBP1Q14766 1721 aa15.52■□□□□ 0.08
SRP54-203ENST00000553544 H7C1D1 291 aa15.52■□□□□ 0.08
SRP54-203ENST00000553544 NOGQ13253 232 aa15.52■□□□□ 0.08
SRP54-203ENST00000553544 SLC51AQ86UW1 340 aa15.52■□□□□ 0.08
SRP54-203ENST00000553544 CNOT7Q9UIV1 285 aaKnown RBP15.52■□□□□ 0.08
SRP54-203ENST00000553544 CDHR2Q9BYE9 1310 aa15.51■□□□□ 0.07
SRP54-203ENST00000553544 RAD17O75943 681 aa15.51■□□□□ 0.07
SRP54-203ENST00000553544 HIRAP54198 1017 aaPredicted RBP15.51■□□□□ 0.07
SRP54-203ENST00000553544 KIAA2012Q0VF49 1180 aa15.51■□□□□ 0.07
SRP54-203ENST00000553544 PRKRIP1Q9H875 184 aaPredicted RBP15.51■□□□□ 0.07
SRP54-203ENST00000553544 ERBB4Q15303 1308 aa15.5■□□□□ 0.07
SRP54-203ENST00000553544 USP48Q86UV5 1035 aa15.5■□□□□ 0.07
SRP54-203ENST00000553544 ABCC4O15439 1325 aa15.49■□□□□ 0.07
SRP54-203ENST00000553544 MAPK8IP3Q9UPT6 1336 aa15.49■□□□□ 0.07
SRP54-203ENST00000553544 HUNKP57058 714 aa15.49■□□□□ 0.07
SRP54-203ENST00000553544 DDX46Q7L014 1031 aaKnown RBP15.49■□□□□ 0.07
SRP54-203ENST00000553544 TRPM7Q96QT4 1865 aa15.48■□□□□ 0.07
SRP54-203ENST00000553544 THSD7BQ9C0I4 1608 aa15.47■□□□□ 0.07
SRP54-203ENST00000553544 EIF2S2P20042 333 aaKnown RBP15.47■□□□□ 0.07
SRP54-203ENST00000553544 TRPM4Q8TD43 1214 aa15.47■□□□□ 0.07
SRP54-203ENST00000553544 DPF2Q92785 391 aa15.47■□□□□ 0.07
SRP54-203ENST00000553544 CCDC102AQ96A19 550 aa15.47■□□□□ 0.07
SRP54-203ENST00000553544 ZIC5Q96T25 663 aa15.47■□□□□ 0.07
SRP54-203ENST00000553544 THUMPD2Q9BTF0 503 aaKnown RBP15.47■□□□□ 0.07
SRP54-203ENST00000553544 NUP98P52948 1817 aa15.47■□□□□ 0.07
SRP54-203ENST00000553544 HCLS1P14317 486 aaPredicted RBP15.46■□□□□ 0.07
SRP54-203ENST00000553544 TMPOP42166 694 aaKnown RBP15.46■□□□□ 0.07
SRP54-203ENST00000553544 GRAPQ13588 217 aa15.46■□□□□ 0.07
SRP54-203ENST00000553544 PDIA6Q15084 440 aa15.46■□□□□ 0.07
SRP54-203ENST00000553544 HSP90AB3PQ58FF7 597 aa15.46■□□□□ 0.07
SRP54-203ENST00000553544 RGMBQ6NW40 437 aa15.46■□□□□ 0.07
SRP54-203ENST00000553544 TMC4Q7Z404 712 aa15.46■□□□□ 0.07
SRP54-203ENST00000553544 MICALL2Q8IY33 904 aa15.46■□□□□ 0.07
SRP54-203ENST00000553544 C2orf69Q8N8R5 385 aa15.46■□□□□ 0.07
SRP54-203ENST00000553544 GRAPLQ8TC17 118 aaPredicted RBP15.46■□□□□ 0.07
SRP54-203ENST00000553544 CASP8AP2Q9UKL3 1982 aa15.45■□□□□ 0.06
SRP54-203ENST00000553544 YDJCA8MPS7 323 aa15.45■□□□□ 0.06
SRP54-203ENST00000553544 RIPK4P57078 832 aa15.45■□□□□ 0.06
SRP54-203ENST00000553544 WASHC4Q2M389 1173 aa15.45■□□□□ 0.06
SRP54-203ENST00000553544 KRT26Q7Z3Y9 468 aa15.45■□□□□ 0.06
SRP54-203ENST00000553544 SAGE1Q9NXZ1 904 aa15.45■□□□□ 0.06
SRP54-203ENST00000553544 TRMT112Q9UI30 125 aaKnown RBP15.45■□□□□ 0.06
SRP54-203ENST00000553544 SHTN1A0MZ66 631 aa15.44■□□□□ 0.06
SRP54-203ENST00000553544 SAMD7Q7Z3H4 446 aa15.44■□□□□ 0.06
SRP54-203ENST00000553544 LRP10Q7Z4F1 713 aa15.44■□□□□ 0.06
SRP54-203ENST00000553544 NLRP10Q86W26 655 aa15.44■□□□□ 0.06
SRP54-203ENST00000553544 DCPSQ96C86 337 aaKnown RBP15.44■□□□□ 0.06
SRP54-203ENST00000553544 GBA2Q9HCG7 927 aaPredicted RBP15.44■□□□□ 0.06
SRP54-203ENST00000553544 TSPYL4Q9UJ04 414 aa15.44■□□□□ 0.06
SRP54-203ENST00000553544 ADAMTS8Q9UP79 889 aa15.44■□□□□ 0.06
SRP54-203ENST00000553544 ZBTB12Q9Y330 459 aaPredicted RBP15.44■□□□□ 0.06
SRP54-203ENST00000553544 FAM155AB1AL88 458 aaPredicted RBP15.43■□□□□ 0.06
SRP54-203ENST00000553544 ZNF157P51786 506 aaPredicted RBP15.43■□□□□ 0.06
SRP54-203ENST00000553544 KIF23Q02241 960 aaPredicted RBP15.43■□□□□ 0.06
SRP54-203ENST00000553544 AIMP1Q12904 312 aaKnown RBP15.43■□□□□ 0.06
SRP54-203ENST00000553544 TCIRG1Q13488 830 aa15.43■□□□□ 0.06
SRP54-203ENST00000553544 DLK2Q6UY11 383 aa15.43■□□□□ 0.06
SRP54-203ENST00000553544 COPS6Q7L5N1 327 aa15.43■□□□□ 0.06
SRP54-203ENST00000553544 NSFL1CQ9UNZ2 370 aaKnown RBP15.43■□□□□ 0.06
SRP54-203ENST00000553544 SH3TC1Q8TE82 1336 aa15.43■□□□□ 0.06
SRP54-203ENST00000553544 PSMD14O00487 310 aa15.42■□□□□ 0.06
SRP54-203ENST00000553544 TRPA1O75762 1119 aa15.42■□□□□ 0.06
SRP54-203ENST00000553544 RPS12P25398 132 aaKnown RBP15.42■□□□□ 0.06
SRP54-203ENST00000553544 WDR43Q15061 677 aaKnown RBP eCLIP15.42■□□□□ 0.06
SRP54-203ENST00000553544 TBC1D10BQ4KMP7 808 aaPredicted RBP15.42■□□□□ 0.06
SRP54-203ENST00000553544 RBM26Q5T8P6 1007 aaKnown RBP15.42■□□□□ 0.06
SRP54-203ENST00000553544 CCDC146Q8IYE0 955 aa15.42■□□□□ 0.06
SRP54-203ENST00000553544 RUNDC1Q96C34 613 aa15.42■□□□□ 0.06
SRP54-203ENST00000553544 BABAM1Q9NWV8 329 aa15.42■□□□□ 0.06
SRP54-203ENST00000553544 RNF186Q9NXI6 227 aa15.42■□□□□ 0.06
SRP54-203ENST00000553544 TNRC18O15417 2968 aaPredicted RBP15.42■□□□□ 0.06
SRP54-203ENST00000553544 C6orf229H3BNL8 230 aa15.41■□□□□ 0.06
SRP54-203ENST00000553544 ANXA1P04083 346 aa15.41■□□□□ 0.06
SRP54-203ENST00000553544 LMOD3Q0VAK6 560 aa15.41■□□□□ 0.06
SRP54-203ENST00000553544 PROSER3Q2NL68 480 aa15.41■□□□□ 0.06
SRP54-203ENST00000553544 PDE4DIPQ5VU43 2346 aa15.4■□□□□ 0.06
SRP54-203ENST00000553544 RIMBP2O15034 1052 aa15.4■□□□□ 0.06
SRP54-203ENST00000553544 REM2Q8IYK8 340 aaPredicted RBP15.4■□□□□ 0.06
SRP54-203ENST00000553544 XAGE3Q8WTP9 111 aa15.4■□□□□ 0.06
SRP54-203ENST00000553544 DBNDD1Q9H9R9 158 aa15.4■□□□□ 0.06
SRP54-203ENST00000553544 TRIM35Q9UPQ4 493 aa15.4■□□□□ 0.06
SRP54-203ENST00000553544 ZNF316A6NFI3 1004 aaPredicted RBP15.39■□□□□ 0.05
SRP54-203ENST00000553544 SOX10P56693 466 aa15.39■□□□□ 0.05
SRP54-203ENST00000553544 SULF1Q8IWU6 871 aa15.39■□□□□ 0.05
SRP54-203ENST00000553544 CSRNP1Q96S65 589 aa15.39■□□□□ 0.05
SRP54-203ENST00000553544 EYA3Q99504 573 aa15.39■□□□□ 0.05
SRP54-203ENST00000553544 ADM5C9JUS6 153 aa15.38■□□□□ 0.05
SRP54-203ENST00000553544 EGFRP00533 1210 aa15.38■□□□□ 0.05
SRP54-203ENST00000553544 SF3B3Q15393 1217 aaKnown RBP15.38■□□□□ 0.05
SRP54-203ENST00000553544 PIAS4Q8N2W9 510 aaPredicted RBP15.38■□□□□ 0.05
SRP54-203ENST00000553544 NECTIN2Q92692 538 aa15.38■□□□□ 0.05
SRP54-203ENST00000553544 KCNQ5Q9NR82 932 aa15.38■□□□□ 0.05
SRP54-203ENST00000553544 POLLQ9UGP5 575 aa15.38■□□□□ 0.05
SRP54-203ENST00000553544 ECE2O60344 883 aa15.37■□□□□ 0.05
SRP54-203ENST00000553544 NEUROD2Q15784 382 aa15.37■□□□□ 0.05
SRP54-203ENST00000553544 DOK7Q18PE1 504 aa15.37■□□□□ 0.05
Retrieved 100 of 20,778 RNA–protein pairs in 95.3 ms