RNA–Protein interactions for RNA: ENST00000553438.1

IFT43-205, Transcript of intraflagellar transport 43, humanhuman

TSL 5

Gene IFT43, Length 472 nt, Biotype processed transcript, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IFT43-205ENST00000553438 PDIA6Q15084 440 aa13.45□□□□□ -0.26
IFT43-205ENST00000553438 SP8Q8IXZ3 490 aa13.45□□□□□ -0.26
IFT43-205ENST00000553438 MPNDQ8N594 471 aa13.45□□□□□ -0.26
IFT43-205ENST00000553438 TRPM4Q8TD43 1214 aa13.45□□□□□ -0.26
IFT43-205ENST00000553438 ZC3H15Q8WU90 426 aaKnown RBP13.45□□□□□ -0.26
IFT43-205ENST00000553438 ZNF408Q9H9D4 720 aa13.45□□□□□ -0.26
IFT43-205ENST00000553438 TSPYL4Q9UJ04 414 aa13.45□□□□□ -0.26
IFT43-205ENST00000553438 ANXA1P04083 346 aa13.44□□□□□ -0.26
IFT43-205ENST00000553438 EIF2S2P20042 333 aaKnown RBP13.44□□□□□ -0.26
IFT43-205ENST00000553438 HIRAP54198 1017 aaPredicted RBP13.44□□□□□ -0.26
IFT43-205ENST00000553438 BRPF1P55201 1214 aaPredicted RBP13.44□□□□□ -0.26
IFT43-205ENST00000553438 TNIP1Q15025 636 aa13.44□□□□□ -0.26
IFT43-205ENST00000553438 PROSER3Q2NL68 480 aa13.44□□□□□ -0.26
IFT43-205ENST00000553438 MCOLN1Q9GZU1 580 aa13.44□□□□□ -0.26
IFT43-205ENST00000553438 MAPK8IP3Q9UPT6 1336 aa13.43□□□□□ -0.26
IFT43-205ENST00000553438 HCLS1P14317 486 aaPredicted RBP13.43□□□□□ -0.26
IFT43-205ENST00000553438 HSP90AB3PQ58FF7 597 aa13.43□□□□□ -0.26
IFT43-205ENST00000553438 CDC37L1Q7L3B6 337 aa13.43□□□□□ -0.26
IFT43-205ENST00000553438 NLRP10Q86W26 655 aa13.43□□□□□ -0.26
IFT43-205ENST00000553438 CASP8AP2Q9UKL3 1982 aa13.42□□□□□ -0.26
IFT43-205ENST00000553438 SHTN1A0MZ66 631 aa13.42□□□□□ -0.26
IFT43-205ENST00000553438 YDJCA8MPS7 323 aa13.42□□□□□ -0.26
IFT43-205ENST00000553438 GRAPQ13588 217 aa13.42□□□□□ -0.26
IFT43-205ENST00000553438 DDX46Q7L014 1031 aaKnown RBP13.42□□□□□ -0.26
IFT43-205ENST00000553438 GRAPLQ8TC17 118 aaPredicted RBP13.42□□□□□ -0.26
IFT43-205ENST00000553438 CFAP44Q96MT7 982 aa13.42□□□□□ -0.26
IFT43-205ENST00000553438 PNNQ9H307 717 aaKnown RBP13.42□□□□□ -0.26
IFT43-205ENST00000553438 CNOT7Q9UIV1 285 aaKnown RBP13.42□□□□□ -0.26
IFT43-205ENST00000553438 SH3TC1Q8TE82 1336 aa13.41□□□□□ -0.26
IFT43-205ENST00000553438 H7C1D1 291 aa13.41□□□□□ -0.26
IFT43-205ENST00000553438 NOGQ13253 232 aa13.41□□□□□ -0.26
IFT43-205ENST00000553438 COPS6Q7L5N1 327 aa13.41□□□□□ -0.26
IFT43-205ENST00000553438 MICALL2Q8IY33 904 aa13.41□□□□□ -0.26
IFT43-205ENST00000553438 ZIC5Q96T25 663 aa13.41□□□□□ -0.26
IFT43-205ENST00000553438 TRMT112Q9UI30 125 aaKnown RBP13.41□□□□□ -0.26
IFT43-205ENST00000553438 HUNKP57058 714 aa13.4□□□□□ -0.26
IFT43-205ENST00000553438 AIMP1Q12904 312 aaKnown RBP13.4□□□□□ -0.26
IFT43-205ENST00000553438 TCIRG1Q13488 830 aa13.4□□□□□ -0.26
IFT43-205ENST00000553438 DGKZQ13574 1117 aa13.4□□□□□ -0.26
IFT43-205ENST00000553438 USP48Q86UV5 1035 aa13.4□□□□□ -0.26
IFT43-205ENST00000553438 XAGE3Q8WTP9 111 aa13.4□□□□□ -0.26
IFT43-205ENST00000553438 LAMB2P55268 1798 aa13.4□□□□□ -0.26
IFT43-205ENST00000553438 DLK2Q6UY11 383 aa13.39□□□□□ -0.27
IFT43-205ENST00000553438 TMC4Q7Z404 712 aa13.39□□□□□ -0.27
IFT43-205ENST00000553438 NECTIN2Q92692 538 aa13.39□□□□□ -0.27
IFT43-205ENST00000553438 BABAM1Q9NWV8 329 aa13.39□□□□□ -0.27
IFT43-205ENST00000553438 ZBTB12Q9Y330 459 aaPredicted RBP13.39□□□□□ -0.27
IFT43-205ENST00000553438 DUOX1Q9NRD9 1551 aa13.39□□□□□ -0.27
IFT43-205ENST00000553438 ANKRD36CQ5JPF3 1778 aa13.39□□□□□ -0.27
IFT43-205ENST00000553438 RIPK4P57078 832 aa13.38□□□□□ -0.27
IFT43-205ENST00000553438 SAMD7Q7Z3H4 446 aa13.38□□□□□ -0.27
IFT43-205ENST00000553438 DPF2Q92785 391 aa13.38□□□□□ -0.27
IFT43-205ENST00000553438 PSMD14O00487 310 aa13.37□□□□□ -0.27
IFT43-205ENST00000553438 WASHC4Q2M389 1173 aa13.37□□□□□ -0.27
IFT43-205ENST00000553438 TBC1D10BQ4KMP7 808 aaPredicted RBP13.37□□□□□ -0.27
IFT43-205ENST00000553438 RGMBQ6NW40 437 aa13.37□□□□□ -0.27
IFT43-205ENST00000553438 KRT26Q7Z3Y9 468 aa13.37□□□□□ -0.27
IFT43-205ENST00000553438 ZNF428Q96B54 188 aa13.37□□□□□ -0.27
IFT43-205ENST00000553438 DBNDD1Q9H9R9 158 aa13.37□□□□□ -0.27
IFT43-205ENST00000553438 NSFL1CQ9UNZ2 370 aaKnown RBP13.37□□□□□ -0.27
IFT43-205ENST00000553438 TAF1P21675 1872 aa13.36□□□□□ -0.27
IFT43-205ENST00000553438 FAM155AB1AL88 458 aaPredicted RBP13.36□□□□□ -0.27
IFT43-205ENST00000553438 RIMBP2O15034 1052 aa13.36□□□□□ -0.27
IFT43-205ENST00000553438 EGFRP00533 1210 aa13.36□□□□□ -0.27
IFT43-205ENST00000553438 CELF1Q92879 486 aaKnown RBP13.36□□□□□ -0.27
IFT43-205ENST00000553438 GBA2Q9HCG7 927 aaPredicted RBP13.36□□□□□ -0.27
IFT43-205ENST00000553438 PDE4DIPQ5VU43 2346 aa13.36□□□□□ -0.27
IFT43-205ENST00000553438 LRRC37AA6NMS7 1700 aa13.36□□□□□ -0.27
IFT43-205ENST00000553438 ADM5C9JUS6 153 aa13.35□□□□□ -0.27
IFT43-205ENST00000553438 C6orf229H3BNL8 230 aa13.35□□□□□ -0.27
IFT43-205ENST00000553438 RPS12P25398 132 aaKnown RBP13.35□□□□□ -0.27
IFT43-205ENST00000553438 LMOD3Q0VAK6 560 aa13.35□□□□□ -0.27
IFT43-205ENST00000553438 SF3B3Q15393 1217 aaKnown RBP13.35□□□□□ -0.27
IFT43-205ENST00000553438 KRT24Q2M2I5 525 aa13.35□□□□□ -0.27
IFT43-205ENST00000553438 RBM26Q5T8P6 1007 aaKnown RBP13.35□□□□□ -0.27
IFT43-205ENST00000553438 C2orf69Q8N8R5 385 aa13.35□□□□□ -0.27
IFT43-205ENST00000553438 DCPSQ96C86 337 aaKnown RBP13.35□□□□□ -0.27
IFT43-205ENST00000553438 POLLQ9UGP5 575 aa13.35□□□□□ -0.27
IFT43-205ENST00000553438 ECE2O60344 883 aa13.34□□□□□ -0.27
IFT43-205ENST00000553438 TMPOP42166 694 aaKnown RBP13.34□□□□□ -0.27
IFT43-205ENST00000553438 GPSM2P81274 684 aa13.34□□□□□ -0.27
IFT43-205ENST00000553438 KIF23Q02241 960 aaPredicted RBP13.34□□□□□ -0.27
IFT43-205ENST00000553438 CCDC102AQ96A19 550 aa13.34□□□□□ -0.27
IFT43-205ENST00000553438 KCNQ5Q9NR82 932 aa13.34□□□□□ -0.27
IFT43-205ENST00000553438 SAGE1Q9NXZ1 904 aa13.34□□□□□ -0.27
IFT43-205ENST00000553438 CHPF2Q9P2E5 772 aa13.34□□□□□ -0.27
IFT43-205ENST00000553438 RTL9Q8NET4 1388 aa13.33□□□□□ -0.27
IFT43-205ENST00000553438 ATP5J2-PTCD1G3V325 749 aa13.33□□□□□ -0.28
IFT43-205ENST00000553438 ZNF157P51786 506 aaPredicted RBP13.33□□□□□ -0.28
IFT43-205ENST00000553438 DOK7Q18PE1 504 aa13.33□□□□□ -0.28
IFT43-205ENST00000553438 PLBD2Q8NHP8 589 aa13.33□□□□□ -0.28
IFT43-205ENST00000553438 FAM89AQ96GI7 184 aa13.33□□□□□ -0.28
IFT43-205ENST00000553438 EYA3Q99504 573 aa13.33□□□□□ -0.28
IFT43-205ENST00000553438 ISCA1Q9BUE6 129 aa13.33□□□□□ -0.28
IFT43-205ENST00000553438 POLR2AP24928 1970 aaKnown RBP13.32□□□□□ -0.28
IFT43-205ENST00000553438 CHL1O00533 1208 aa13.32□□□□□ -0.28
IFT43-205ENST00000553438 KIF4BQ2VIQ3 1234 aa13.32□□□□□ -0.28
IFT43-205ENST00000553438 ANKRD13DQ6ZTN6 518 aa13.32□□□□□ -0.28
IFT43-205ENST00000553438 SULF1Q8IWU6 871 aa13.32□□□□□ -0.28
IFT43-205ENST00000553438 TBC1D16Q8TBP0 767 aa13.32□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 26.9 ms