RNA–Protein interactions for RNA: ENST00000553343.5

SDR39U1-204, Transcript of short chain dehydrogenase/reductase family 39U member 1, humanhuman

TSL 2

Gene SDR39U1, Length 681 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDR39U1-204ENST00000553343 MTX1Q13505 466 aa25.69■■□□□ 1.7
SDR39U1-204ENST00000553343 TTLL11Q8NHH1 800 aa25.69■■□□□ 1.7
SDR39U1-204ENST00000553343 RPGRQ92834 1020 aaKnown RBP25.68■■□□□ 1.7
SDR39U1-204ENST00000553343 KAZALD1Q96I82 304 aa25.68■■□□□ 1.7
SDR39U1-204ENST00000553343 CRAMP1Q96RY5 1269 aa25.68■■□□□ 1.7
SDR39U1-204ENST00000553343 ALDH1B1P30837 517 aa25.67■■□□□ 1.7
SDR39U1-204ENST00000553343 C2CD5Q86YS7 1000 aa25.67■■□□□ 1.7
SDR39U1-204ENST00000553343 RBM17Q96I25 401 aaKnown RBP25.67■■□□□ 1.7
SDR39U1-204ENST00000553343 BICC1Q9H694 974 aaKnown RBP25.67■■□□□ 1.7
SDR39U1-204ENST00000553343 BRCA1P38398 1863 aaKnown RBP25.66■■□□□ 1.7
SDR39U1-204ENST00000553343 DDX46Q7L014 1031 aaKnown RBP25.66■■□□□ 1.7
SDR39U1-204ENST00000553343 TMC4Q7Z404 712 aa25.66■■□□□ 1.7
SDR39U1-204ENST00000553343 CCDC24Q8N4L8 307 aa25.66■■□□□ 1.7
SDR39U1-204ENST00000553343 JARID2Q92833 1246 aaPredicted RBP25.66■■□□□ 1.7
SDR39U1-204ENST00000553343 CNKSR1Q969H4 720 aa25.66■■□□□ 1.7
SDR39U1-204ENST00000553343 FHDC1Q9C0D6 1143 aaPredicted RBP25.66■■□□□ 1.7
SDR39U1-204ENST00000553343 LRRFIP2Q9Y608 721 aaKnown RBP25.66■■□□□ 1.7
SDR39U1-204ENST00000553343 LMBR1LQ6UX01 489 aa25.64■■□□□ 1.7
SDR39U1-204ENST00000553343 ANKRD44Q8N8A2 993 aa25.64■■□□□ 1.7
SDR39U1-204ENST00000553343 CRBNQ96SW2 442 aa25.64■■□□□ 1.7
SDR39U1-204ENST00000553343 CDC5LQ99459 802 aaKnown RBP25.64■■□□□ 1.7
SDR39U1-204ENST00000553343 SYT17Q9BSW7 474 aa25.64■■□□□ 1.7
SDR39U1-204ENST00000553343 EPHA10Q5JZY3 1008 aa25.63■■□□□ 1.69
SDR39U1-204ENST00000553343 C3orf67Q6ZVT6 689 aa25.63■■□□□ 1.69
SDR39U1-204ENST00000553343 RPAP2Q8IXW5 612 aaPredicted RBP25.63■■□□□ 1.69
SDR39U1-204ENST00000553343 IFIT5Q13325 482 aaKnown RBP25.62■■□□□ 1.69
SDR39U1-204ENST00000553343 GRAPQ13588 217 aa25.62■■□□□ 1.69
SDR39U1-204ENST00000553343 CCDC57Q2TAC2 916 aa25.62■■□□□ 1.69
SDR39U1-204ENST00000553343 GRAPLQ8TC17 118 aaPredicted RBP25.62■■□□□ 1.69
SDR39U1-204ENST00000553343 PIM2Q9P1W9 311 aa25.62■■□□□ 1.69
SDR39U1-204ENST00000553343 ANKRD18BA2A2Z9 1011 aa25.61■■□□□ 1.69
SDR39U1-204ENST00000553343 DPEP1P16444 411 aa25.61■■□□□ 1.69
SDR39U1-204ENST00000553343 KLHL34Q8N239 644 aa25.61■■□□□ 1.69
SDR39U1-204ENST00000553343 FBXO3Q9UK99 471 aa25.61■■□□□ 1.69
SDR39U1-204ENST00000553343 BBOX1O75936 387 aa25.6■■□□□ 1.69
SDR39U1-204ENST00000553343 NEFLP07196 543 aa25.6■■□□□ 1.69
SDR39U1-204ENST00000553343 KCNA3P22001 575 aa25.6■■□□□ 1.69
SDR39U1-204ENST00000553343 ITGA6P23229 1130 aa25.6■■□□□ 1.69
SDR39U1-204ENST00000553343 GREM2Q9H772 168 aa25.6■■□□□ 1.69
SDR39U1-204ENST00000553343 ATP8B2P98198 1209 aa25.59■■□□□ 1.69
SDR39U1-204ENST00000553343 FAM161AQ3B820 660 aa25.59■■□□□ 1.69
SDR39U1-204ENST00000553343 TTLL6Q8N841 843 aa25.59■■□□□ 1.69
SDR39U1-204ENST00000553343 HMMRO75330 724 aa25.58■■□□□ 1.69
SDR39U1-204ENST00000553343 CHRNA5P30532 468 aa25.58■■□□□ 1.69
SDR39U1-204ENST00000553343 GRIPAP1Q4V328 841 aa25.58■■□□□ 1.69
SDR39U1-204ENST00000553343 CEP85Q6P2H3 762 aa25.58■■□□□ 1.69
SDR39U1-204ENST00000553343 ZNF622Q969S3 477 aaKnown RBP eCLIP25.58■■□□□ 1.69
SDR39U1-204ENST00000553343 CHMP3Q9Y3E7 222 aa25.58■■□□□ 1.69
SDR39U1-204ENST00000553343 A0A0G2JLW4 131 aa25.57■■□□□ 1.68
SDR39U1-204ENST00000553343 IGHMBP2P38935 993 aaKnown RBP25.57■■□□□ 1.68
SDR39U1-204ENST00000553343 SOGA3Q5TF21 947 aa25.57■■□□□ 1.68
SDR39U1-204ENST00000553343 ANKRD18AQ8IVF6 992 aa25.57■■□□□ 1.68
SDR39U1-204ENST00000553343 ARFGEF1Q9Y6D6 1849 aa25.57■■□□□ 1.68
SDR39U1-204ENST00000553343 LRRC37AA6NMS7 1700 aa25.57■■□□□ 1.68
SDR39U1-204ENST00000553343 SRGAP3O43295 1099 aa25.56■■□□□ 1.68
SDR39U1-204ENST00000553343 RPS8P62241 208 aaKnown RBP25.56■■□□□ 1.68
SDR39U1-204ENST00000553343 ERICH6BQ5W0A0 696 aa25.56■■□□□ 1.68
SDR39U1-204ENST00000553343 CC2D2BQ6DHV5 1058 aa25.56■■□□□ 1.68
SDR39U1-204ENST00000553343 NLGN2Q8NFZ4 835 aa25.56■■□□□ 1.68
SDR39U1-204ENST00000553343 SSH3Q8TE77 659 aa25.56■■□□□ 1.68
SDR39U1-204ENST00000553343 POLA2Q14181 598 aa25.55■■□□□ 1.68
SDR39U1-204ENST00000553343 DALRD3Q5D0E6 543 aaKnown RBP25.55■■□□□ 1.68
SDR39U1-204ENST00000553343 COPRSQ9NQ92 184 aa25.55■■□□□ 1.68
SDR39U1-204ENST00000553343 BSDC1Q9NW68 430 aaPredicted RBP25.55■■□□□ 1.68
SDR39U1-204ENST00000553343 TAF7LQ5H9L4 462 aa25.54■■□□□ 1.68
SDR39U1-204ENST00000553343 PRPF40BQ6NWY9 871 aaKnown RBP25.54■■□□□ 1.68
SDR39U1-204ENST00000553343 EXOC6Q8TAG9 804 aa25.54■■□□□ 1.68
SDR39U1-204ENST00000553343 TMX4Q9H1E5 349 aaPredicted RBP25.54■■□□□ 1.68
SDR39U1-204ENST00000553343 C1orf115Q9H7X2 142 aa25.54■■□□□ 1.68
SDR39U1-204ENST00000553343 SEC31BQ9NQW1 1179 aa25.54■■□□□ 1.68
SDR39U1-204ENST00000553343 CACNA1SQ13698 1873 aa25.53■■□□□ 1.68
SDR39U1-204ENST00000553343 PPEF1O14829 653 aaPredicted RBP25.53■■□□□ 1.68
SDR39U1-204ENST00000553343 RFX5P48382 616 aaPredicted RBP25.53■■□□□ 1.68
SDR39U1-204ENST00000553343 MPHOSPH8Q99549 860 aa25.53■■□□□ 1.68
SDR39U1-204ENST00000553343 CELF1Q92879 486 aaKnown RBP25.52■■□□□ 1.68
SDR39U1-204ENST00000553343 CCDC85AQ96PX6 553 aaPredicted RBP25.52■■□□□ 1.68
SDR39U1-204ENST00000553343 SLX4Q8IY92 1834 aa25.51■■□□□ 1.67
SDR39U1-204ENST00000553343 CIAO1O76071 339 aa25.51■■□□□ 1.67
SDR39U1-204ENST00000553343 PTPN12Q05209 780 aaKnown RBP25.51■■□□□ 1.67
SDR39U1-204ENST00000553343 SP8Q8IXZ3 490 aa25.51■■□□□ 1.67
SDR39U1-204ENST00000553343 ATP6V0A2Q9Y487 856 aa25.51■■□□□ 1.67
SDR39U1-204ENST00000553343 PNMA6EA0A0J9YXQ4 647 aa25.5■■□□□ 1.67
SDR39U1-204ENST00000553343 LDHAL6AQ6ZMR3 332 aa25.49■■□□□ 1.67
SDR39U1-204ENST00000553343 C7orf43Q8WVR3 580 aa25.49■■□□□ 1.67
SDR39U1-204ENST00000553343 TAF1P21675 1872 aa25.49■■□□□ 1.67
SDR39U1-204ENST00000553343 SPEF2Q9C093 1822 aa25.49■■□□□ 1.67
SDR39U1-204ENST00000553343 HSP90AB4PQ58FF6 505 aa25.48■■□□□ 1.67
SDR39U1-204ENST00000553343 NOP58Q9Y2X3 529 aaKnown RBP25.48■■□□□ 1.67
SDR39U1-204ENST00000553343 MROH5Q6ZUA9 1318 aa25.47■■□□□ 1.67
SDR39U1-204ENST00000553343 EYA2O00167 538 aa25.47■■□□□ 1.67
SDR39U1-204ENST00000553343 HDAC1Q13547 482 aaPredicted RBP25.47■■□□□ 1.67
SDR39U1-204ENST00000553343 ANKRD2Q9GZV1 360 aa25.47■■□□□ 1.67
SDR39U1-204ENST00000553343 COL4A1P02462 1669 aa25.46■■□□□ 1.67
SDR39U1-204ENST00000553343 IL15P40933 162 aaPredicted RBP25.46■■□□□ 1.67
SDR39U1-204ENST00000553343 CCDC93Q567U6 631 aa25.46■■□□□ 1.67
SDR39U1-204ENST00000553343 CNNM1Q9NRU3 951 aa25.46■■□□□ 1.67
SDR39U1-204ENST00000553343 SNED1Q8TER0 1413 aa25.46■■□□□ 1.67
SDR39U1-204ENST00000553343 IRX6P78412 446 aaPredicted RBP25.45■■□□□ 1.66
SDR39U1-204ENST00000553343 SIRT2Q8IXJ6 389 aa25.45■■□□□ 1.66
SDR39U1-204ENST00000553343 RTKN2Q8IZC4 609 aa25.45■■□□□ 1.66
Retrieved 100 of 20,778 RNA–protein pairs in 95.1 ms