RNA–Protein interactions for RNA: ENST00000553096.5

BEST3-212, Transcript of bestrophin 3, humanhuman

TSL 1 (best) BASIC

Gene BEST3, Length 2,929 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BEST3-212ENST00000553096 KSR2Q6VAB6 950 aa8.75□□□□□ -1.01
BEST3-212ENST00000553096 MPNDQ8N594 471 aa8.75□□□□□ -1.01
BEST3-212ENST00000553096 KIF3AQ9Y496 699 aa8.75□□□□□ -1.01
BEST3-212ENST00000553096 ZSCAN21Q9Y5A6 473 aaPredicted RBP8.75□□□□□ -1.01
BEST3-212ENST00000553096 RPAP1Q9BWH6 1393 aaPredicted RBP8.75□□□□□ -1.01
BEST3-212ENST00000553096 ADCY5O95622 1261 aa8.75□□□□□ -1.01
BEST3-212ENST00000553096 ZNF496Q96IT1 587 aaPredicted RBP8.75□□□□□ -1.01
BEST3-212ENST00000553096 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP8.75□□□□□ -1.01
BEST3-212ENST00000553096 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP8.75□□□□□ -1.01
BEST3-212ENST00000553096 TRIM6-TRIM34B2RNG4 842 aa8.74□□□□□ -1.01
BEST3-212ENST00000553096 SRGAP3O43295 1099 aa8.74□□□□□ -1.01
BEST3-212ENST00000553096 IGKV5-2P06315 115 aa8.74□□□□□ -1.01
BEST3-212ENST00000553096 CSB-PGBD3P0DP91 1061 aa8.74□□□□□ -1.01
BEST3-212ENST00000553096 HSPA4P34932 840 aa8.74□□□□□ -1.01
BEST3-212ENST00000553096 PIP4K2AP48426 406 aaPredicted RBP8.74□□□□□ -1.01
BEST3-212ENST00000553096 ILDR2Q71H61 639 aa8.74□□□□□ -1.01
BEST3-212ENST00000553096 NUTM1Q86Y26 1132 aa8.74□□□□□ -1.01
BEST3-212ENST00000553096 PI4K2BQ8TCG2 481 aa8.74□□□□□ -1.01
BEST3-212ENST00000553096 DDX21Q9NR30 783 aaKnown RBP eCLIP8.74□□□□□ -1.01
BEST3-212ENST00000553096 SPG7Q9UQ90 795 aa8.74□□□□□ -1.01
BEST3-212ENST00000553096 SH3BP1Q9Y3L3 701 aa8.74□□□□□ -1.01
BEST3-212ENST00000553096 PLCH1Q4KWH8 1693 aa8.74□□□□□ -1.01
BEST3-212ENST00000553096 UTYO14607 1347 aa8.74□□□□□ -1.01
BEST3-212ENST00000553096 KDM4AO75164 1064 aa8.74□□□□□ -1.01
BEST3-212ENST00000553096 ZSCAN22P10073 491 aaPredicted RBP8.74□□□□□ -1.01
BEST3-212ENST00000553096 MTX1Q13505 466 aa8.74□□□□□ -1.01
BEST3-212ENST00000553096 IFNL2Q8IZJ0 200 aa8.74□□□□□ -1.01
BEST3-212ENST00000553096 RILPL2Q969X0 211 aa8.74□□□□□ -1.01
BEST3-212ENST00000553096 CARD10Q9BWT7 1032 aa8.74□□□□□ -1.01
BEST3-212ENST00000553096 GTPBP4Q9BZE4 634 aaKnown RBP8.74□□□□□ -1.01
BEST3-212ENST00000553096 USP25Q9UHP3 1055 aa8.74□□□□□ -1.01
BEST3-212ENST00000553096 LRP6O75581 1613 aa8.74□□□□□ -1.01
BEST3-212ENST00000553096 RHPN1Q8TCX5 695 aa8.74□□□□□ -1.01
BEST3-212ENST00000553096 SUCLG2Q96I99 432 aa8.74□□□□□ -1.01
BEST3-212ENST00000553096 CHAMP1Q96JM3 812 aa8.74□□□□□ -1.01
BEST3-212ENST00000553096 HYPKQ9NX55 129 aa8.74□□□□□ -1.01
BEST3-212ENST00000553096 PALD1Q9ULE6 856 aa8.74□□□□□ -1.01
BEST3-212ENST00000553096 WDR17Q8IZU2 1322 aa8.73□□□□□ -1.01
BEST3-212ENST00000553096 IRF6O14896 467 aa8.73□□□□□ -1.01
BEST3-212ENST00000553096 GADD45BO75293 160 aaPredicted RBP8.73□□□□□ -1.01
BEST3-212ENST00000553096 SURF6O75683 361 aaKnown RBP8.73□□□□□ -1.01
BEST3-212ENST00000553096 AIMP1Q12904 312 aaKnown RBP8.73□□□□□ -1.01
BEST3-212ENST00000553096 EGFL6Q8IUX8 553 aa8.73□□□□□ -1.01
BEST3-212ENST00000553096 DCAF5Q96JK2 942 aa8.73□□□□□ -1.01
BEST3-212ENST00000553096 C8orf37Q96NL8 207 aa8.73□□□□□ -1.01
BEST3-212ENST00000553096 DNAJC2Q99543 621 aaKnown RBP8.73□□□□□ -1.01
BEST3-212ENST00000553096 RGS17Q9UGC6 210 aaPredicted RBP8.73□□□□□ -1.01
BEST3-212ENST00000553096 USP16Q9Y5T5 823 aa8.73□□□□□ -1.01
BEST3-212ENST00000553096 SPATA31A6Q5VVP1 1343 aa8.73□□□□□ -1.01
BEST3-212ENST00000553096 RAB11FIP3O75154 756 aa8.73□□□□□ -1.01
BEST3-212ENST00000553096 ALDH1L1O75891 902 aa8.73□□□□□ -1.01
BEST3-212ENST00000553096 MYL6BP14649 208 aa8.73□□□□□ -1.01
BEST3-212ENST00000553096 PA2G4Q9UQ80 394 aaKnown RBP8.73□□□□□ -1.01
BEST3-212ENST00000553096 MAP4K4O95819 1239 aaPredicted RBP8.72□□□□□ -1.01
BEST3-212ENST00000553096 COL22A1Q8NFW1 1626 aaPredicted RBP8.72□□□□□ -1.01
BEST3-212ENST00000553096 RAD50Q92878 1312 aa8.72□□□□□ -1.01
BEST3-212ENST00000553096 STX6O43752 255 aa8.72□□□□□ -1.01
BEST3-212ENST00000553096 NOL8Q76FK4 1167 aaKnown RBP8.72□□□□□ -1.01
BEST3-212ENST00000553096 GPATCH11Q8N954 259 aa8.72□□□□□ -1.01
BEST3-212ENST00000553096 XAGE3Q8WTP9 111 aa8.72□□□□□ -1.01
BEST3-212ENST00000553096 LIMCH1Q9UPQ0 1083 aa8.72□□□□□ -1.01
BEST3-212ENST00000553096 USP42Q9H9J4 1324 aaKnown RBP8.72□□□□□ -1.01
BEST3-212ENST00000553096 COL14A1Q05707 1796 aaKnown RBP8.71□□□□□ -1.01
BEST3-212ENST00000553096 F13A1P00488 732 aa8.71□□□□□ -1.01
BEST3-212ENST00000553096 HCLS1P14317 486 aaPredicted RBP8.71□□□□□ -1.01
BEST3-212ENST00000553096 LINS1Q8NG48 757 aa8.71□□□□□ -1.01
BEST3-212ENST00000553096 ARID3AQ99856 593 aa8.71□□□□□ -1.01
BEST3-212ENST00000553096 UPF3BQ9BZI7 483 aaKnown RBP8.71□□□□□ -1.01
BEST3-212ENST00000553096 BICC1Q9H694 974 aaKnown RBP8.71□□□□□ -1.01
BEST3-212ENST00000553096 SMC3Q9UQE7 1217 aa8.71□□□□□ -1.01
BEST3-212ENST00000553096 TNS2Q63HR2 1409 aa8.71□□□□□ -1.01
BEST3-212ENST00000553096 NEURL1BA8MQ27 555 aa8.71□□□□□ -1.02
BEST3-212ENST00000553096 GRM8O00222 908 aa8.71□□□□□ -1.02
BEST3-212ENST00000553096 EPHA10Q5JZY3 1008 aa8.71□□□□□ -1.02
BEST3-212ENST00000553096 ZSCAN31Q96LW9 406 aaPredicted RBP8.71□□□□□ -1.02
BEST3-212ENST00000553096 GDPD2Q9HCC8 539 aa8.71□□□□□ -1.02
BEST3-212ENST00000553096 KIF20AO95235 890 aa8.7□□□□□ -1.02
BEST3-212ENST00000553096 CCDC192P0DO97 292 aa8.7□□□□□ -1.02
BEST3-212ENST00000553096 EP400NLQ6ZTU2 488 aa8.7□□□□□ -1.02
BEST3-212ENST00000553096 COPS6Q7L5N1 327 aa8.7□□□□□ -1.02
BEST3-212ENST00000553096 KIAA1524Q8TCG1 905 aa8.7□□□□□ -1.02
BEST3-212ENST00000553096 KIF1BPQ96EK5 621 aa8.7□□□□□ -1.02
BEST3-212ENST00000553096 NGLY1Q96IV0 654 aa8.7□□□□□ -1.02
BEST3-212ENST00000553096 TTC12Q9H892 705 aaPredicted RBP8.7□□□□□ -1.02
BEST3-212ENST00000553096 PRDM11Q9NQV5 511 aa8.7□□□□□ -1.02
BEST3-212ENST00000553096 CNPY2Q9Y2B0 182 aa8.7□□□□□ -1.02
BEST3-212ENST00000553096 ANKRD36CQ5JPF3 1778 aa8.7□□□□□ -1.02
BEST3-212ENST00000553096 SYCP1Q15431 976 aa8.7□□□□□ -1.02
BEST3-212ENST00000553096 CNTROBQ8N137 903 aa8.7□□□□□ -1.02
BEST3-212ENST00000553096 ZNF710Q8N1W2 664 aa8.7□□□□□ -1.02
BEST3-212ENST00000553096 TTC14Q96N46 770 aa8.7□□□□□ -1.02
BEST3-212ENST00000553096 FUCA2Q9BTY2 467 aa8.7□□□□□ -1.02
BEST3-212ENST00000553096 SH2B1Q9NRF2 756 aaPredicted RBP8.7□□□□□ -1.02
BEST3-212ENST00000553096 C9orf78Q9NZ63 289 aaPredicted RBP8.7□□□□□ -1.02
BEST3-212ENST00000553096 NRAPQ86VF7 1730 aa8.7□□□□□ -1.02
BEST3-212ENST00000553096 SGSM2O43147 1006 aa8.7□□□□□ -1.02
BEST3-212ENST00000553096 SEMA3FQ13275 785 aa8.7□□□□□ -1.02
BEST3-212ENST00000553096 LARP1Q6PKG0 1096 aaKnown RBP8.7□□□□□ -1.02
BEST3-212ENST00000553096 POTEAQ6S8J7 498 aa8.7□□□□□ -1.02
BEST3-212ENST00000553096 PDCL2Q8N4E4 241 aa8.7□□□□□ -1.02
Retrieved 100 of 20,778 RNA–protein pairs in 11.5 ms