RNA–Protein interactions for RNA: ENST00000552810.5

CEP290-207, Transcript of centrosomal protein 290, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene CEP290, Length 7,948 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CEP290-207ENST00000552810 CCDC14Q49A88 953 aa8.86□□□□□ -0.99
CEP290-207ENST00000552810 PRPF38AQ8NAV1 312 aaKnown RBP8.86□□□□□ -0.99
CEP290-207ENST00000552810 UBAC1Q9BSL1 405 aa8.86□□□□□ -0.99
CEP290-207ENST00000552810 TTC12Q9H892 705 aaPredicted RBP8.86□□□□□ -0.99
CEP290-207ENST00000552810 THUMPD2Q9BTF0 503 aaKnown RBP8.86□□□□□ -0.99
CEP290-207ENST00000552810 NBPF3Q9H094 633 aa8.86□□□□□ -0.99
CEP290-207ENST00000552810 MRPL46Q9H2W6 279 aaKnown RBP8.86□□□□□ -0.99
CEP290-207ENST00000552810 IDH1O75874 414 aaKnown RBP8.86□□□□□ -0.99
CEP290-207ENST00000552810 ATP2A2P16615 1042 aaKnown RBP8.86□□□□□ -0.99
CEP290-207ENST00000552810 TMEM132EQ6IEE7 984 aa8.86□□□□□ -0.99
CEP290-207ENST00000552810 FMNL3Q8IVF7 1028 aa8.86□□□□□ -0.99
CEP290-207ENST00000552810 FAM212AQ96EL1 285 aa8.86□□□□□ -0.99
CEP290-207ENST00000552810 VCX3BQ9H321 246 aa8.86□□□□□ -0.99
CEP290-207ENST00000552810 DDX41Q9UJV9 622 aaKnown RBP8.86□□□□□ -0.99
CEP290-207ENST00000552810 CSPG5O95196 566 aa8.86□□□□□ -0.99
CEP290-207ENST00000552810 CAPN2P17655 700 aa8.86□□□□□ -0.99
CEP290-207ENST00000552810 HAND2P61296 217 aa8.86□□□□□ -0.99
CEP290-207ENST00000552810 PPP4R3AQ6IN85 833 aa8.86□□□□□ -0.99
CEP290-207ENST00000552810 ZSCAN30Q86W11 494 aa8.86□□□□□ -0.99
CEP290-207ENST00000552810 MICAL3Q7RTP6 2002 aa8.86□□□□□ -0.99
CEP290-207ENST00000552810 CCDC180Q9P1Z9 1646 aa8.86□□□□□ -0.99
CEP290-207ENST00000552810 CASQ2O14958 399 aaPredicted RBP8.86□□□□□ -0.99
CEP290-207ENST00000552810 ZBTB24O43167 697 aaPredicted RBP8.86□□□□□ -0.99
CEP290-207ENST00000552810 GCKP35557 465 aa8.86□□□□□ -0.99
CEP290-207ENST00000552810 STK38LQ9Y2H1 464 aa8.86□□□□□ -0.99
CEP290-207ENST00000552810 BRD2P25440 801 aaKnown RBP8.85□□□□□ -0.99
CEP290-207ENST00000552810 C20orf194Q5TEA3 1177 aa8.85□□□□□ -0.99
CEP290-207ENST00000552810 LRCH2Q5VUJ6 765 aa8.85□□□□□ -0.99
CEP290-207ENST00000552810 NR1H4Q96RI1 486 aaPredicted RBP8.85□□□□□ -0.99
CEP290-207ENST00000552810 DNAI1Q9UI46 699 aa8.85□□□□□ -0.99
CEP290-207ENST00000552810 NUP155O75694 1391 aa8.85□□□□□ -0.99
CEP290-207ENST00000552810 GOLIM4O00461 696 aa8.85□□□□□ -0.99
CEP290-207ENST00000552810 PPP1R12BO60237 982 aaPredicted RBP8.85□□□□□ -0.99
CEP290-207ENST00000552810 IGBP1P78318 339 aa8.85□□□□□ -0.99
CEP290-207ENST00000552810 GEMIN8Q9NWZ8 242 aaKnown RBP8.85□□□□□ -0.99
CEP290-207ENST00000552810 MYO10Q9HD67 2058 aa8.85□□□□□ -0.99
CEP290-207ENST00000552810 PSMA5P28066 241 aa8.85□□□□□ -0.99
CEP290-207ENST00000552810 APLFQ8IW19 511 aaPredicted RBP8.85□□□□□ -0.99
CEP290-207ENST00000552810 CCDC65Q8IXS2 484 aa8.85□□□□□ -0.99
CEP290-207ENST00000552810 RAB3IPQ96QF0 476 aaPredicted RBP8.85□□□□□ -0.99
CEP290-207ENST00000552810 SEC62Q99442 399 aaKnown RBP8.85□□□□□ -0.99
CEP290-207ENST00000552810 AFG3L2Q9Y4W6 797 aa8.85□□□□□ -0.99
CEP290-207ENST00000552810 RAB3GAP2Q9H2M9 1393 aa8.85□□□□□ -0.99
CEP290-207ENST00000552810 IQCA1Q86XH1 822 aa8.85□□□□□ -0.99
CEP290-207ENST00000552810 ABTB1Q969K4 478 aaPredicted RBP8.85□□□□□ -0.99
CEP290-207ENST00000552810 PRKRIP1Q9H875 184 aaPredicted RBP8.85□□□□□ -0.99
CEP290-207ENST00000552810 GSDMBQ8TAX9 411 aa8.85□□□□□ -0.99
CEP290-207ENST00000552810 LMNB2Q03252 620 aa8.85□□□□□ -0.99
CEP290-207ENST00000552810 NECAB1Q8N987 351 aa8.85□□□□□ -0.99
CEP290-207ENST00000552810 EXOC6BQ9Y2D4 811 aa8.85□□□□□ -0.99
CEP290-207ENST00000552810 CCNB3Q8WWL7 1395 aa8.85□□□□□ -0.99
CEP290-207ENST00000552810 SNW1Q13573 536 aaKnown RBP8.84□□□□□ -0.99
CEP290-207ENST00000552810 PPP1R21Q6ZMI0 780 aa8.84□□□□□ -0.99
CEP290-207ENST00000552810 PASD1Q8IV76 773 aa8.84□□□□□ -0.99
CEP290-207ENST00000552810 TMCO5AQ8N6Q1 288 aa8.84□□□□□ -0.99
CEP290-207ENST00000552810 LACTBP83111 547 aaPredicted RBP8.84□□□□□ -0.99
CEP290-207ENST00000552810 CCDC38Q502W7 563 aa8.84□□□□□ -0.99
CEP290-207ENST00000552810 MGARPQ8TDB4 240 aa8.84□□□□□ -0.99
CEP290-207ENST00000552810 CACTINQ8WUQ7 758 aaKnown RBP8.84□□□□□ -0.99
CEP290-207ENST00000552810 CHMP6Q96FZ7 201 aa8.84□□□□□ -0.99
CEP290-207ENST00000552810 ABCF2Q9UG63 623 aa8.84□□□□□ -0.99
CEP290-207ENST00000552810 LUC7L2Q9Y383 392 aaKnown RBP8.84□□□□□ -0.99
CEP290-207ENST00000552810 TACC1O75410 805 aa8.84□□□□□ -0.99
CEP290-207ENST00000552810 HSPA4P34932 840 aa8.84□□□□□ -0.99
CEP290-207ENST00000552810 SESN3P58005 492 aa8.84□□□□□ -0.99
CEP290-207ENST00000552810 PNISRQ8TF01 805 aaKnown RBP8.84□□□□□ -0.99
CEP290-207ENST00000552810 SLC4A2P04920 1241 aa8.84□□□□□ -0.99
CEP290-207ENST00000552810 MAP3K11Q16584 847 aa8.84□□□□□ -0.99
CEP290-207ENST00000552810 LZTFL1Q9NQ48 299 aa8.84□□□□□ -0.99
CEP290-207ENST00000552810 HSF2BPO75031 334 aa8.84□□□□□ -0.99
CEP290-207ENST00000552810 SFPQP23246 707 aaKnown RBP eCLIP8.84□□□□□ -0.99
CEP290-207ENST00000552810 STX17P56962 302 aa8.84□□□□□ -0.99
CEP290-207ENST00000552810 SLMAPQ14BN4 828 aa8.84□□□□□ -0.99
CEP290-207ENST00000552810 VPS37AQ8NEZ2 397 aa8.84□□□□□ -0.99
CEP290-207ENST00000552810 PSMB7Q99436 277 aa8.84□□□□□ -0.99
CEP290-207ENST00000552810 LRP2BPQ9P2M1 347 aa8.84□□□□□ -0.99
CEP290-207ENST00000552810 CCDC122Q5T0U0 273 aa8.83□□□□□ -1
CEP290-207ENST00000552810 MX2P20592 715 aa8.83□□□□□ -1
CEP290-207ENST00000552810 KRT85P78386 507 aa8.83□□□□□ -1
CEP290-207ENST00000552810 IL1RL1Q01638 556 aa8.83□□□□□ -1
CEP290-207ENST00000552810 CCDC8Q9H0W5 538 aaPredicted RBP8.83□□□□□ -1
CEP290-207ENST00000552810 SPG7Q9UQ90 795 aa8.83□□□□□ -1
CEP290-207ENST00000552810 CTAGE15A4D2H0 777 aa8.83□□□□□ -1
CEP290-207ENST00000552810 RCSD1Q6JBY9 416 aa8.83□□□□□ -1
CEP290-207ENST00000552810 TRIM31Q9BZY9 425 aa8.83□□□□□ -1
CEP290-207ENST00000552810 IDEP14735 1019 aa8.83□□□□□ -1
CEP290-207ENST00000552810 RASA3Q14644 834 aa8.83□□□□□ -1
CEP290-207ENST00000552810 CCDC114Q96M63 670 aa8.83□□□□□ -1
CEP290-207ENST00000552810 NDEL1Q9GZM8 345 aa8.83□□□□□ -1
CEP290-207ENST00000552810 hCG_2014768A0A024R1R8 64 aa8.83□□□□□ -1
CEP290-207ENST00000552810 TSPY2A6NKD2 308 aa8.83□□□□□ -1
CEP290-207ENST00000552810 RPSAP08865 295 aaKnown RBP8.83□□□□□ -1
CEP290-207ENST00000552810 TSPY3P0CV98 308 aa8.83□□□□□ -1
CEP290-207ENST00000552810 TSPY8P0CW00 308 aa8.83□□□□□ -1
CEP290-207ENST00000552810 NRG3P56975 720 aa8.83□□□□□ -1
CEP290-207ENST00000552810 TSPY1Q01534 308 aa8.83□□□□□ -1
CEP290-207ENST00000552810 RELL1Q8IUW5 271 aa8.83□□□□□ -1
CEP290-207ENST00000552810 TBC1D2BQ9UPU7 963 aa8.83□□□□□ -1
CEP290-207ENST00000552810 STIM1Q13586 685 aa8.83□□□□□ -1
CEP290-207ENST00000552810 TTC30BQ8N4P2 665 aa8.83□□□□□ -1
Retrieved 100 of 20,778 RNA–protein pairs in 13.4 ms