RNA–Protein interactions for RNA: ENST00000552606.1

CCDC59-207, Transcript of coiled-coil domain containing 59, humanhuman

TSL 2

Gene CCDC59, Length 600 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC59-207ENST00000552606 CHRNA5P30532 468 aa11.6□□□□□ -0.55
CCDC59-207ENST00000552606 GCKRQ14397 625 aa11.6□□□□□ -0.55
CCDC59-207ENST00000552606 ZBTB38Q8NAP3 1195 aaPredicted RBP11.6□□□□□ -0.55
CCDC59-207ENST00000552606 TRMT112Q9UI30 125 aaKnown RBP11.6□□□□□ -0.55
CCDC59-207ENST00000552606 TNNQ9UQP3 1299 aa11.6□□□□□ -0.55
CCDC59-207ENST00000552606 NPHP1O15259 732 aa11.59□□□□□ -0.55
CCDC59-207ENST00000552606 ALDH1L1O75891 902 aa11.59□□□□□ -0.55
CCDC59-207ENST00000552606 SRGNP10124 158 aa11.59□□□□□ -0.55
CCDC59-207ENST00000552606 PDE6BP35913 854 aa11.59□□□□□ -0.55
CCDC59-207ENST00000552606 FAM89AQ96GI7 184 aa11.59□□□□□ -0.55
CCDC59-207ENST00000552606 API5Q9BZZ5 524 aaKnown RBP11.59□□□□□ -0.55
CCDC59-207ENST00000552606 RCAN3Q9UKA8 241 aa11.59□□□□□ -0.55
CCDC59-207ENST00000552606 PDZRN3Q9UPQ7 1066 aa11.59□□□□□ -0.55
CCDC59-207ENST00000552606 UTYO14607 1347 aa11.59□□□□□ -0.55
CCDC59-207ENST00000552606 DUOX1Q9NRD9 1551 aa11.58□□□□□ -0.55
CCDC59-207ENST00000552606 A0A0G2JLW4 131 aa11.58□□□□□ -0.56
CCDC59-207ENST00000552606 H7C1W4 665 aa11.58□□□□□ -0.56
CCDC59-207ENST00000552606 HCLS1P14317 486 aaPredicted RBP11.58□□□□□ -0.56
CCDC59-207ENST00000552606 SLC4A10Q6U841 1118 aa11.58□□□□□ -0.56
CCDC59-207ENST00000552606 ATF7IPQ6VMQ6 1270 aa11.58□□□□□ -0.56
CCDC59-207ENST00000552606 C2CD5Q86YS7 1000 aa11.58□□□□□ -0.56
CCDC59-207ENST00000552606 SRCIN1Q9C0H9 1055 aa11.58□□□□□ -0.56
CCDC59-207ENST00000552606 IRS4O14654 1257 aaPredicted RBP11.57□□□□□ -0.56
CCDC59-207ENST00000552606 POTEIP0CG38 1075 aa11.57□□□□□ -0.56
CCDC59-207ENST00000552606 YBX3P16989 372 aaKnown RBP eCLIP11.57□□□□□ -0.56
CCDC59-207ENST00000552606 GTF2E1P29083 439 aaPredicted RBP11.57□□□□□ -0.56
CCDC59-207ENST00000552606 RTL5Q5HYW3 569 aaPredicted RBP11.57□□□□□ -0.56
CCDC59-207ENST00000552606 ZKSCAN2Q63HK3 967 aa11.57□□□□□ -0.56
CCDC59-207ENST00000552606 STYK1Q6J9G0 422 aa11.57□□□□□ -0.56
CCDC59-207ENST00000552606 UBE3BQ7Z3V4 1068 aa11.57□□□□□ -0.56
CCDC59-207ENST00000552606 PLA2G12BQ9BX93 195 aa11.57□□□□□ -0.56
CCDC59-207ENST00000552606 RTL9Q8NET4 1388 aa11.56□□□□□ -0.56
CCDC59-207ENST00000552606 ZNF646O15015 1829 aaPredicted RBP11.56□□□□□ -0.56
CCDC59-207ENST00000552606 H0YIN7 160 aa11.56□□□□□ -0.56
CCDC59-207ENST00000552606 GRM8O00222 908 aa11.56□□□□□ -0.56
CCDC59-207ENST00000552606 NPR1P16066 1061 aa11.56□□□□□ -0.56
CCDC59-207ENST00000552606 CD44P16070 742 aaKnown RBP11.56□□□□□ -0.56
CCDC59-207ENST00000552606 HOXA10P31260 410 aaPredicted RBP11.56□□□□□ -0.56
CCDC59-207ENST00000552606 INTS3Q68E01 1043 aaKnown RBP11.56□□□□□ -0.56
CCDC59-207ENST00000552606 JARID2Q92833 1246 aaPredicted RBP11.56□□□□□ -0.56
CCDC59-207ENST00000552606 FRAT1Q92837 279 aaPredicted RBP11.56□□□□□ -0.56
CCDC59-207ENST00000552606 MASTLQ96GX5 879 aa11.56□□□□□ -0.56
CCDC59-207ENST00000552606 PSME4Q14997 1843 aa11.56□□□□□ -0.56
CCDC59-207ENST00000552606 UTRNP46939 3433 aa11.56□□□□□ -0.56
CCDC59-207ENST00000552606 IPO8O15397 1037 aaKnown RBP11.55□□□□□ -0.56
CCDC59-207ENST00000552606 RLBP1P12271 317 aa11.55□□□□□ -0.56
CCDC59-207ENST00000552606 CCT4P50991 539 aaKnown RBP11.55□□□□□ -0.56
CCDC59-207ENST00000552606 SF3B3Q15393 1217 aaKnown RBP11.55□□□□□ -0.56
CCDC59-207ENST00000552606 NLRP3Q96P20 1036 aa11.55□□□□□ -0.56
CCDC59-207ENST00000552606 PIM2Q9P1W9 311 aa11.55□□□□□ -0.56
CCDC59-207ENST00000552606 ARAP2Q8WZ64 1704 aa11.55□□□□□ -0.56
CCDC59-207ENST00000552606 PDE8AO60658 829 aa11.54□□□□□ -0.56
CCDC59-207ENST00000552606 NBPF7P0C2Y1 421 aaPredicted RBP11.54□□□□□ -0.56
CCDC59-207ENST00000552606 CTSWP56202 376 aa11.54□□□□□ -0.56
CCDC59-207ENST00000552606 PRPF40BQ6NWY9 871 aaKnown RBP11.54□□□□□ -0.56
CCDC59-207ENST00000552606 KAZALD1Q96I82 304 aa11.54□□□□□ -0.56
CCDC59-207ENST00000552606 USP44Q9H0E7 712 aa11.54□□□□□ -0.56
CCDC59-207ENST00000552606 WWC3Q9ULE0 1092 aa11.54□□□□□ -0.56
CCDC59-207ENST00000552606 FOXO4P98177 505 aa11.53□□□□□ -0.56
CCDC59-207ENST00000552606 SLC51AQ86UW1 340 aa11.53□□□□□ -0.56
CCDC59-207ENST00000552606 TMEM57Q8N5G2 664 aa11.53□□□□□ -0.56
CCDC59-207ENST00000552606 TTLL6Q8N841 843 aa11.53□□□□□ -0.56
CCDC59-207ENST00000552606 RPGRQ92834 1020 aaKnown RBP11.53□□□□□ -0.56
CCDC59-207ENST00000552606 CLUAP1Q96AJ1 413 aa11.53□□□□□ -0.56
CCDC59-207ENST00000552606 SUCLG2Q96I99 432 aa11.53□□□□□ -0.56
CCDC59-207ENST00000552606 CRAMP1Q96RY5 1269 aa11.53□□□□□ -0.56
CCDC59-207ENST00000552606 HSP90B1P14625 803 aaKnown RBP11.52□□□□□ -0.57
CCDC59-207ENST00000552606 DALRD3Q5D0E6 543 aaKnown RBP11.52□□□□□ -0.57
CCDC59-207ENST00000552606 EPHA10Q5JZY3 1008 aa11.52□□□□□ -0.57
CCDC59-207ENST00000552606 DZIP1LQ8IYY4 767 aaKnown RBP11.52□□□□□ -0.57
CCDC59-207ENST00000552606 TTLL11Q8NHH1 800 aa11.52□□□□□ -0.57
CCDC59-207ENST00000552606 C7orf43Q8WVR3 580 aa11.52□□□□□ -0.57
CCDC59-207ENST00000552606 CNKSR1Q969H4 720 aa11.52□□□□□ -0.57
CCDC59-207ENST00000552606 ZNF622Q969S3 477 aaKnown RBP eCLIP11.52□□□□□ -0.573e-7■□□□□ 9.7
CCDC59-207ENST00000552606 MEIS3Q99687 375 aa11.52□□□□□ -0.57
CCDC59-207ENST00000552606 BCS1LQ9Y276 419 aa11.52□□□□□ -0.57
CCDC59-207ENST00000552606 MYH13Q9UKX3 1938 aa11.52□□□□□ -0.57
CCDC59-207ENST00000552606 PLIN1O60240 522 aa11.51□□□□□ -0.57
CCDC59-207ENST00000552606 CSF1RP07333 972 aa11.51□□□□□ -0.57
CCDC59-207ENST00000552606 GRAPQ13588 217 aa11.51□□□□□ -0.57
CCDC59-207ENST00000552606 FAM161AQ3B820 660 aa11.51□□□□□ -0.57
CCDC59-207ENST00000552606 RABL6Q3YEC7 729 aaPredicted RBP11.51□□□□□ -0.57
CCDC59-207ENST00000552606 ANKRD44Q8N8A2 993 aa11.51□□□□□ -0.57
CCDC59-207ENST00000552606 GRAPLQ8TC17 118 aaPredicted RBP11.51□□□□□ -0.57
CCDC59-207ENST00000552606 RBM17Q96I25 401 aaKnown RBP11.51□□□□□ -0.57
CCDC59-207ENST00000552606 GREM2Q9H772 168 aa11.51□□□□□ -0.57
CCDC59-207ENST00000552606 C9orf78Q9NZ63 289 aaPredicted RBP11.51□□□□□ -0.57
CCDC59-207ENST00000552606 COL4A5P29400 1685 aa11.51□□□□□ -0.57
CCDC59-207ENST00000552606 PPEF1O14829 653 aaPredicted RBP11.5□□□□□ -0.57
CCDC59-207ENST00000552606 ALDH1B1P30837 517 aa11.5□□□□□ -0.57
CCDC59-207ENST00000552606 CCDC152Q4G0S7 254 aa11.5□□□□□ -0.57
CCDC59-207ENST00000552606 FTSJ3Q8IY81 847 aaKnown RBP11.5□□□□□ -0.57
CCDC59-207ENST00000552606 PANK1Q8TE04 598 aa11.5□□□□□ -0.57
CCDC59-207ENST00000552606 CELF1Q92879 486 aaKnown RBP11.5□□□□□ -0.57
CCDC59-207ENST00000552606 BICC1Q9H694 974 aaKnown RBP11.5□□□□□ -0.57
CCDC59-207ENST00000552606 SEC31BQ9NQW1 1179 aa11.5□□□□□ -0.57
CCDC59-207ENST00000552606 SCN9AQ15858 1988 aa11.5□□□□□ -0.57
CCDC59-207ENST00000552606 NFKBIEO00221 500 aa11.49□□□□□ -0.57
CCDC59-207ENST00000552606 RRP1P56182 461 aaKnown RBP11.49□□□□□ -0.57
CCDC59-207ENST00000552606 GPR162Q16538 588 aa11.49□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 11.8 ms