RNA–Protein interactions for RNA: ENST00000552465.1

CACNB3-222, Transcript of calcium voltage-gated channel auxiliary subunit beta 3, humanhuman

TSL 3

Gene CACNB3, Length 557 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNB3-222ENST00000552465 KIAA2012Q0VF49 1180 aa22.28■■□□□ 1.16
CACNB3-222ENST00000552465 TNIP1Q15025 636 aa22.28■■□□□ 1.16
CACNB3-222ENST00000552465 BCL2L13Q9BXK5 485 aa22.28■■□□□ 1.16
CACNB3-222ENST00000552465 TRPM7Q96QT4 1865 aa22.28■■□□□ 1.16
CACNB3-222ENST00000552465 CDHR2Q9BYE9 1310 aa22.28■■□□□ 1.16
CACNB3-222ENST00000552465 RAD17O75943 681 aa22.27■■□□□ 1.16
CACNB3-222ENST00000552465 PROSER3Q2NL68 480 aa22.27■■□□□ 1.16
CACNB3-222ENST00000552465 TSPYL4Q9UJ04 414 aa22.27■■□□□ 1.16
CACNB3-222ENST00000552465 BRPF1P55201 1214 aaPredicted RBP22.26■■□□□ 1.15
CACNB3-222ENST00000552465 CDC37L1Q7L3B6 337 aa22.26■■□□□ 1.15
CACNB3-222ENST00000552465 PNNQ9H307 717 aaKnown RBP22.26■■□□□ 1.15
CACNB3-222ENST00000552465 ANXA1P04083 346 aa22.25■■□□□ 1.15
CACNB3-222ENST00000552465 HCLS1P14317 486 aaPredicted RBP22.25■■□□□ 1.15
CACNB3-222ENST00000552465 NLRP10Q86W26 655 aa22.25■■□□□ 1.15
CACNB3-222ENST00000552465 MCOLN1Q9GZU1 580 aa22.25■■□□□ 1.15
CACNB3-222ENST00000552465 ZNF408Q9H9D4 720 aa22.25■■□□□ 1.15
CACNB3-222ENST00000552465 CNOT7Q9UIV1 285 aaKnown RBP22.25■■□□□ 1.15
CACNB3-222ENST00000552465 DLG5Q8TDM6 1919 aa22.24■■□□□ 1.15
CACNB3-222ENST00000552465 HSP90AB3PQ58FF7 597 aa22.24■■□□□ 1.15
CACNB3-222ENST00000552465 DDX46Q7L014 1031 aaKnown RBP22.24■■□□□ 1.15
CACNB3-222ENST00000552465 TRPM4Q8TD43 1214 aa22.24■■□□□ 1.15
CACNB3-222ENST00000552465 MAPK8IP3Q9UPT6 1336 aa22.24■■□□□ 1.15
CACNB3-222ENST00000552465 YDJCA8MPS7 323 aa22.23■■□□□ 1.15
CACNB3-222ENST00000552465 GRAPQ13588 217 aa22.23■■□□□ 1.15
CACNB3-222ENST00000552465 COPS6Q7L5N1 327 aa22.23■■□□□ 1.15
CACNB3-222ENST00000552465 GRAPLQ8TC17 118 aaPredicted RBP22.23■■□□□ 1.15
CACNB3-222ENST00000552465 SHTN1A0MZ66 631 aa22.22■■□□□ 1.15
CACNB3-222ENST00000552465 TRMT112Q9UI30 125 aaKnown RBP22.22■■□□□ 1.15
CACNB3-222ENST00000552465 H7C1D1 291 aa22.21■■□□□ 1.15
CACNB3-222ENST00000552465 AIMP1Q12904 312 aaKnown RBP22.21■■□□□ 1.15
CACNB3-222ENST00000552465 TCIRG1Q13488 830 aa22.21■■□□□ 1.15
CACNB3-222ENST00000552465 USP48Q86UV5 1035 aa22.21■■□□□ 1.15
CACNB3-222ENST00000552465 XAGE3Q8WTP9 111 aa22.21■■□□□ 1.15
CACNB3-222ENST00000552465 BABAM1Q9NWV8 329 aa22.21■■□□□ 1.15
CACNB3-222ENST00000552465 NOGQ13253 232 aa22.2■■□□□ 1.14
CACNB3-222ENST00000552465 TMC4Q7Z404 712 aa22.2■■□□□ 1.14
CACNB3-222ENST00000552465 MICALL2Q8IY33 904 aa22.2■■□□□ 1.14
CACNB3-222ENST00000552465 ZIC5Q96T25 663 aa22.2■■□□□ 1.14
CACNB3-222ENST00000552465 SH3TC1Q8TE82 1336 aa22.2■■□□□ 1.14
CACNB3-222ENST00000552465 RIPK4P57078 832 aa22.19■■□□□ 1.14
CACNB3-222ENST00000552465 NECTIN2Q92692 538 aa22.19■■□□□ 1.14
CACNB3-222ENST00000552465 CFAP44Q96MT7 982 aa22.19■■□□□ 1.14
CACNB3-222ENST00000552465 HUNKP57058 714 aa22.18■■□□□ 1.14
CACNB3-222ENST00000552465 DGKZQ13574 1117 aa22.18■■□□□ 1.14
CACNB3-222ENST00000552465 DLK2Q6UY11 383 aa22.18■■□□□ 1.14
CACNB3-222ENST00000552465 DPF2Q92785 391 aa22.18■■□□□ 1.14
CACNB3-222ENST00000552465 ZBTB12Q9Y330 459 aaPredicted RBP22.18■■□□□ 1.14
CACNB3-222ENST00000552465 SAMD7Q7Z3H4 446 aa22.17■■□□□ 1.14
CACNB3-222ENST00000552465 PSMD14O00487 310 aa22.16■■□□□ 1.14
CACNB3-222ENST00000552465 WASHC4Q2M389 1173 aa22.16■■□□□ 1.14
CACNB3-222ENST00000552465 DUOX1Q9NRD9 1551 aa22.14■■□□□ 1.13
CACNB3-222ENST00000552465 TBC1D10BQ4KMP7 808 aaPredicted RBP22.14■■□□□ 1.13
CACNB3-222ENST00000552465 RGMBQ6NW40 437 aa22.14■■□□□ 1.13
CACNB3-222ENST00000552465 KRT26Q7Z3Y9 468 aa22.14■■□□□ 1.13
CACNB3-222ENST00000552465 ZNF428Q96B54 188 aa22.14■■□□□ 1.13
CACNB3-222ENST00000552465 DBNDD1Q9H9R9 158 aa22.14■■□□□ 1.13
CACNB3-222ENST00000552465 NSFL1CQ9UNZ2 370 aaKnown RBP22.14■■□□□ 1.13
CACNB3-222ENST00000552465 ANKRD36CQ5JPF3 1778 aa22.14■■□□□ 1.13
CACNB3-222ENST00000552465 FAM155AB1AL88 458 aaPredicted RBP22.13■■□□□ 1.13
CACNB3-222ENST00000552465 CELF1Q92879 486 aaKnown RBP22.13■■□□□ 1.13
CACNB3-222ENST00000552465 GBA2Q9HCG7 927 aaPredicted RBP22.13■■□□□ 1.13
CACNB3-222ENST00000552465 LAMB2P55268 1798 aa22.12■■□□□ 1.13
CACNB3-222ENST00000552465 RIMBP2O15034 1052 aa22.12■■□□□ 1.13
CACNB3-222ENST00000552465 EGFRP00533 1210 aa22.12■■□□□ 1.13
CACNB3-222ENST00000552465 RPS12P25398 132 aaKnown RBP22.12■■□□□ 1.13
CACNB3-222ENST00000552465 TMPOP42166 694 aaKnown RBP22.12■■□□□ 1.13
CACNB3-222ENST00000552465 LMOD3Q0VAK6 560 aa22.12■■□□□ 1.13
CACNB3-222ENST00000552465 SF3B3Q15393 1217 aaKnown RBP22.12■■□□□ 1.13
CACNB3-222ENST00000552465 C2orf69Q8N8R5 385 aa22.12■■□□□ 1.13
CACNB3-222ENST00000552465 POLLQ9UGP5 575 aa22.12■■□□□ 1.13
CACNB3-222ENST00000552465 CASP8AP2Q9UKL3 1982 aa22.12■■□□□ 1.13
CACNB3-222ENST00000552465 C6orf229H3BNL8 230 aa22.11■■□□□ 1.13
CACNB3-222ENST00000552465 GPSM2P81274 684 aa22.11■■□□□ 1.13
CACNB3-222ENST00000552465 KRT24Q2M2I5 525 aa22.11■■□□□ 1.13
CACNB3-222ENST00000552465 RBM26Q5T8P6 1007 aaKnown RBP22.11■■□□□ 1.13
CACNB3-222ENST00000552465 CCDC102AQ96A19 550 aa22.11■■□□□ 1.13
CACNB3-222ENST00000552465 DCPSQ96C86 337 aaKnown RBP22.11■■□□□ 1.13
CACNB3-222ENST00000552465 FAM89AQ96GI7 184 aa22.11■■□□□ 1.13
CACNB3-222ENST00000552465 KCNQ5Q9NR82 932 aa22.11■■□□□ 1.13
CACNB3-222ENST00000552465 KIF23Q02241 960 aaPredicted RBP22.1■■□□□ 1.13
CACNB3-222ENST00000552465 PLBD2Q8NHP8 589 aa22.1■■□□□ 1.13
CACNB3-222ENST00000552465 ISCA1Q9BUE6 129 aa22.1■■□□□ 1.13
CACNB3-222ENST00000552465 SAGE1Q9NXZ1 904 aa22.1■■□□□ 1.13
CACNB3-222ENST00000552465 CHPF2Q9P2E5 772 aa22.1■■□□□ 1.13
CACNB3-222ENST00000552465 ADM5C9JUS6 153 aa22.09■■□□□ 1.13
CACNB3-222ENST00000552465 CHL1O00533 1208 aa22.09■■□□□ 1.13
CACNB3-222ENST00000552465 ECE2O60344 883 aa22.09■■□□□ 1.13
CACNB3-222ENST00000552465 DOK7Q18PE1 504 aa22.09■■□□□ 1.13
CACNB3-222ENST00000552465 ANKRD13DQ6ZTN6 518 aa22.09■■□□□ 1.13
CACNB3-222ENST00000552465 ZNF157P51786 506 aaPredicted RBP22.08■■□□□ 1.13
CACNB3-222ENST00000552465 EYA3Q99504 573 aa22.08■■□□□ 1.13
CACNB3-222ENST00000552465 RTL9Q8NET4 1388 aa22.08■■□□□ 1.12
CACNB3-222ENST00000552465 TAF1P21675 1872 aa22.07■■□□□ 1.12
CACNB3-222ENST00000552465 LRRC37AA6NMS7 1700 aa22.07■■□□□ 1.12
CACNB3-222ENST00000552465 ATP5J2-PTCD1G3V325 749 aa22.07■■□□□ 1.12
CACNB3-222ENST00000552465 TBC1D16Q8TBP0 767 aa22.07■■□□□ 1.12
CACNB3-222ENST00000552465 RNF186Q9NXI6 227 aa22.07■■□□□ 1.12
CACNB3-222ENST00000552465 RPS8P62241 208 aaKnown RBP22.06■■□□□ 1.12
CACNB3-222ENST00000552465 KIF4BQ2VIQ3 1234 aa22.06■■□□□ 1.12
CACNB3-222ENST00000552465 TRPA1O75762 1119 aa22.05■■□□□ 1.12
Retrieved 100 of 20,778 RNA–protein pairs in 21.2 ms