RNA–Protein interactions for RNA: ENST00000552377.5

CCDC59-205, Transcript of coiled-coil domain containing 59, humanhuman

TSL 5

Gene CCDC59, Length 563 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC59-205ENST00000552377 SNED1Q8TER0 1413 aa11.6□□□□□ -0.55
CCDC59-205ENST00000552377 TRIM27P14373 513 aa11.6□□□□□ -0.55
CCDC59-205ENST00000552377 CHRNA5P30532 468 aa11.6□□□□□ -0.55
CCDC59-205ENST00000552377 GCKRQ14397 625 aa11.6□□□□□ -0.55
CCDC59-205ENST00000552377 ZBTB38Q8NAP3 1195 aaPredicted RBP11.6□□□□□ -0.55
CCDC59-205ENST00000552377 TRMT112Q9UI30 125 aaKnown RBP11.6□□□□□ -0.55
CCDC59-205ENST00000552377 TNNQ9UQP3 1299 aa11.6□□□□□ -0.55
CCDC59-205ENST00000552377 NPHP1O15259 732 aa11.59□□□□□ -0.55
CCDC59-205ENST00000552377 ALDH1L1O75891 902 aa11.59□□□□□ -0.55
CCDC59-205ENST00000552377 SRGNP10124 158 aa11.59□□□□□ -0.55
CCDC59-205ENST00000552377 PDE6BP35913 854 aa11.59□□□□□ -0.55
CCDC59-205ENST00000552377 FAM89AQ96GI7 184 aa11.59□□□□□ -0.55
CCDC59-205ENST00000552377 API5Q9BZZ5 524 aaKnown RBP11.59□□□□□ -0.55
CCDC59-205ENST00000552377 RCAN3Q9UKA8 241 aa11.59□□□□□ -0.55
CCDC59-205ENST00000552377 PDZRN3Q9UPQ7 1066 aa11.59□□□□□ -0.55
CCDC59-205ENST00000552377 UTYO14607 1347 aa11.59□□□□□ -0.55
CCDC59-205ENST00000552377 DUOX1Q9NRD9 1551 aa11.58□□□□□ -0.55
CCDC59-205ENST00000552377 A0A0G2JLW4 131 aa11.58□□□□□ -0.56
CCDC59-205ENST00000552377 H7C1W4 665 aa11.58□□□□□ -0.56
CCDC59-205ENST00000552377 HCLS1P14317 486 aaPredicted RBP11.58□□□□□ -0.56
CCDC59-205ENST00000552377 SLC4A10Q6U841 1118 aa11.58□□□□□ -0.56
CCDC59-205ENST00000552377 ATF7IPQ6VMQ6 1270 aa11.58□□□□□ -0.56
CCDC59-205ENST00000552377 C2CD5Q86YS7 1000 aa11.58□□□□□ -0.56
CCDC59-205ENST00000552377 SRCIN1Q9C0H9 1055 aa11.58□□□□□ -0.56
CCDC59-205ENST00000552377 IRS4O14654 1257 aaPredicted RBP11.57□□□□□ -0.56
CCDC59-205ENST00000552377 YBX3P16989 372 aaKnown RBP eCLIP11.57□□□□□ -0.56
CCDC59-205ENST00000552377 GTF2E1P29083 439 aaPredicted RBP11.57□□□□□ -0.56
CCDC59-205ENST00000552377 RTL5Q5HYW3 569 aaPredicted RBP11.57□□□□□ -0.56
CCDC59-205ENST00000552377 ZKSCAN2Q63HK3 967 aa11.57□□□□□ -0.56
CCDC59-205ENST00000552377 STYK1Q6J9G0 422 aa11.57□□□□□ -0.56
CCDC59-205ENST00000552377 UBE3BQ7Z3V4 1068 aa11.57□□□□□ -0.56
CCDC59-205ENST00000552377 PLA2G12BQ9BX93 195 aa11.57□□□□□ -0.56
CCDC59-205ENST00000552377 RTL9Q8NET4 1388 aa11.56□□□□□ -0.56
CCDC59-205ENST00000552377 ZNF646O15015 1829 aaPredicted RBP11.56□□□□□ -0.56
CCDC59-205ENST00000552377 H0YIN7 160 aa11.56□□□□□ -0.56
CCDC59-205ENST00000552377 GRM8O00222 908 aa11.56□□□□□ -0.56
CCDC59-205ENST00000552377 GABBR2O75899 941 aa11.56□□□□□ -0.56
CCDC59-205ENST00000552377 NPR1P16066 1061 aa11.56□□□□□ -0.56
CCDC59-205ENST00000552377 HOXA10P31260 410 aaPredicted RBP11.56□□□□□ -0.56
CCDC59-205ENST00000552377 INTS3Q68E01 1043 aaKnown RBP11.56□□□□□ -0.56
CCDC59-205ENST00000552377 JARID2Q92833 1246 aaPredicted RBP11.56□□□□□ -0.56
CCDC59-205ENST00000552377 FRAT1Q92837 279 aaPredicted RBP11.56□□□□□ -0.56
CCDC59-205ENST00000552377 MASTLQ96GX5 879 aa11.56□□□□□ -0.56
CCDC59-205ENST00000552377 PSME4Q14997 1843 aa11.56□□□□□ -0.56
CCDC59-205ENST00000552377 UTRNP46939 3433 aa11.56□□□□□ -0.56
CCDC59-205ENST00000552377 IPO8O15397 1037 aaKnown RBP11.55□□□□□ -0.56
CCDC59-205ENST00000552377 RLBP1P12271 317 aa11.55□□□□□ -0.56
CCDC59-205ENST00000552377 CCT4P50991 539 aaKnown RBP11.55□□□□□ -0.56
CCDC59-205ENST00000552377 SF3B3Q15393 1217 aaKnown RBP11.55□□□□□ -0.56
CCDC59-205ENST00000552377 NLRP3Q96P20 1036 aa11.55□□□□□ -0.56
CCDC59-205ENST00000552377 PIM2Q9P1W9 311 aa11.55□□□□□ -0.56
CCDC59-205ENST00000552377 ARAP2Q8WZ64 1704 aa11.55□□□□□ -0.56
CCDC59-205ENST00000552377 PDE8AO60658 829 aa11.54□□□□□ -0.56
CCDC59-205ENST00000552377 NBPF7P0C2Y1 421 aaPredicted RBP11.54□□□□□ -0.56
CCDC59-205ENST00000552377 CTSWP56202 376 aa11.54□□□□□ -0.56
CCDC59-205ENST00000552377 PRPF40BQ6NWY9 871 aaKnown RBP11.54□□□□□ -0.56
CCDC59-205ENST00000552377 KAZALD1Q96I82 304 aa11.54□□□□□ -0.56
CCDC59-205ENST00000552377 USP44Q9H0E7 712 aa11.54□□□□□ -0.56
CCDC59-205ENST00000552377 FBXO3Q9UK99 471 aa11.54□□□□□ -0.56
CCDC59-205ENST00000552377 WWC3Q9ULE0 1092 aa11.54□□□□□ -0.56
CCDC59-205ENST00000552377 MNX1P50219 401 aaPredicted RBP11.53□□□□□ -0.56
CCDC59-205ENST00000552377 FOXO4P98177 505 aa11.53□□□□□ -0.56
CCDC59-205ENST00000552377 SLC51AQ86UW1 340 aa11.53□□□□□ -0.56
CCDC59-205ENST00000552377 PLCD3Q8N3E9 789 aa11.53□□□□□ -0.56
CCDC59-205ENST00000552377 TMEM57Q8N5G2 664 aa11.53□□□□□ -0.56
CCDC59-205ENST00000552377 TTLL6Q8N841 843 aa11.53□□□□□ -0.56
CCDC59-205ENST00000552377 RPGRQ92834 1020 aaKnown RBP11.53□□□□□ -0.56
CCDC59-205ENST00000552377 CLUAP1Q96AJ1 413 aa11.53□□□□□ -0.56
CCDC59-205ENST00000552377 SUCLG2Q96I99 432 aa11.53□□□□□ -0.56
CCDC59-205ENST00000552377 CRAMP1Q96RY5 1269 aa11.53□□□□□ -0.56
CCDC59-205ENST00000552377 HSP90B1P14625 803 aaKnown RBP11.52□□□□□ -0.57
CCDC59-205ENST00000552377 DALRD3Q5D0E6 543 aaKnown RBP11.52□□□□□ -0.57
CCDC59-205ENST00000552377 EPHA10Q5JZY3 1008 aa11.52□□□□□ -0.57
CCDC59-205ENST00000552377 DZIP1LQ8IYY4 767 aaKnown RBP11.52□□□□□ -0.57
CCDC59-205ENST00000552377 TTLL11Q8NHH1 800 aa11.52□□□□□ -0.57
CCDC59-205ENST00000552377 C7orf43Q8WVR3 580 aa11.52□□□□□ -0.57
CCDC59-205ENST00000552377 CNKSR1Q969H4 720 aa11.52□□□□□ -0.57
CCDC59-205ENST00000552377 ZNF622Q969S3 477 aaKnown RBP eCLIP11.52□□□□□ -0.573e-7■□□□□ 9.7
CCDC59-205ENST00000552377 MEIS3Q99687 375 aa11.52□□□□□ -0.57
CCDC59-205ENST00000552377 BCS1LQ9Y276 419 aa11.52□□□□□ -0.57
CCDC59-205ENST00000552377 MYH13Q9UKX3 1938 aa11.52□□□□□ -0.57
CCDC59-205ENST00000552377 PLIN1O60240 522 aa11.51□□□□□ -0.57
CCDC59-205ENST00000552377 CSF1RP07333 972 aa11.51□□□□□ -0.57
CCDC59-205ENST00000552377 GRAPQ13588 217 aa11.51□□□□□ -0.57
CCDC59-205ENST00000552377 FAM161AQ3B820 660 aa11.51□□□□□ -0.57
CCDC59-205ENST00000552377 RABL6Q3YEC7 729 aaPredicted RBP11.51□□□□□ -0.57
CCDC59-205ENST00000552377 ANKRD44Q8N8A2 993 aa11.51□□□□□ -0.57
CCDC59-205ENST00000552377 ZNF579Q8NAF0 562 aaKnown RBP11.51□□□□□ -0.57
CCDC59-205ENST00000552377 GRAPLQ8TC17 118 aaPredicted RBP11.51□□□□□ -0.57
CCDC59-205ENST00000552377 RBM17Q96I25 401 aaKnown RBP11.51□□□□□ -0.57
CCDC59-205ENST00000552377 GREM2Q9H772 168 aa11.51□□□□□ -0.57
CCDC59-205ENST00000552377 C9orf78Q9NZ63 289 aaPredicted RBP11.51□□□□□ -0.57
CCDC59-205ENST00000552377 COL4A5P29400 1685 aa11.51□□□□□ -0.57
CCDC59-205ENST00000552377 PPEF1O14829 653 aaPredicted RBP11.5□□□□□ -0.57
CCDC59-205ENST00000552377 ALDH1B1P30837 517 aa11.5□□□□□ -0.57
CCDC59-205ENST00000552377 CCDC152Q4G0S7 254 aa11.5□□□□□ -0.57
CCDC59-205ENST00000552377 FTSJ3Q8IY81 847 aaKnown RBP11.5□□□□□ -0.57
CCDC59-205ENST00000552377 PANK1Q8TE04 598 aa11.5□□□□□ -0.57
CCDC59-205ENST00000552377 CELF1Q92879 486 aaKnown RBP11.5□□□□□ -0.57
CCDC59-205ENST00000552377 BICC1Q9H694 974 aaKnown RBP11.5□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 32.3 ms