RNA–Protein interactions for RNA: ENST00000552351.5

CHPT1-210, Transcript of choline phosphotransferase 1, humanhuman

TSL 2

Gene CHPT1, Length 1,524 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHPT1-210ENST00000552351 FRAT1Q92837 279 aaPredicted RBP34.07■■■■□ 3.04
CHPT1-210ENST00000552351 C21orf2O43822 256 aa34.06■■■■□ 3.04
CHPT1-210ENST00000552351 BBOX1O75936 387 aa34.06■■■■□ 3.04
CHPT1-210ENST00000552351 TRIM27P14373 513 aa34.06■■■■□ 3.04
CHPT1-210ENST00000552351 ZKSCAN2Q63HK3 967 aa34.06■■■■□ 3.04
CHPT1-210ENST00000552351 ARHGAP27Q6ZUM4 889 aa34.06■■■■□ 3.04
CHPT1-210ENST00000552351 FER1L6Q2WGJ9 1857 aa34.06■■■■□ 3.04
CHPT1-210ENST00000552351 CC2D2BQ6DHV5 1058 aa34.05■■■■□ 3.04
CHPT1-210ENST00000552351 GRAPQ13588 217 aa34.04■■■■□ 3.04
CHPT1-210ENST00000552351 TMC4Q7Z404 712 aa34.04■■■■□ 3.04
CHPT1-210ENST00000552351 GRAPLQ8TC17 118 aaPredicted RBP34.04■■■■□ 3.04
CHPT1-210ENST00000552351 RTL9Q8NET4 1388 aa34.04■■■■□ 3.04
CHPT1-210ENST00000552351 GRIPAP1Q4V328 841 aa34.04■■■■□ 3.04
CHPT1-210ENST00000552351 TTLL11Q8NHH1 800 aa34.04■■■■□ 3.04
CHPT1-210ENST00000552351 RCAN3Q9UKA8 241 aa34.04■■■■□ 3.04
CHPT1-210ENST00000552351 PPEF1O14829 653 aaPredicted RBP34.02■■■■□ 3.04
CHPT1-210ENST00000552351 CCDC93Q567U6 631 aa34.02■■■■□ 3.04
CHPT1-210ENST00000552351 INTS3Q68E01 1043 aaKnown RBP34.02■■■■□ 3.04
CHPT1-210ENST00000552351 TAF1P21675 1872 aa34.01■■■■□ 3.04
CHPT1-210ENST00000552351 CSF1RP07333 972 aa33.99■■■■□ 3.03
CHPT1-210ENST00000552351 NBPF7P0C2Y1 421 aaPredicted RBP33.99■■■■□ 3.03
CHPT1-210ENST00000552351 RTKN2Q8IZC4 609 aa33.99■■■■□ 3.03
CHPT1-210ENST00000552351 USP44Q9H0E7 712 aa33.99■■■■□ 3.03
CHPT1-210ENST00000552351 TMX4Q9H1E5 349 aaPredicted RBP33.99■■■■□ 3.03
CHPT1-210ENST00000552351 ZNF219Q9P2Y4 722 aaPredicted RBP33.99■■■■□ 3.03
CHPT1-210ENST00000552351 ATP6V0A2Q9Y487 856 aa33.99■■■■□ 3.03
CHPT1-210ENST00000552351 LTBP3Q9NS15 1303 aa33.99■■■■□ 3.03
CHPT1-210ENST00000552351 LRRC37AA6NMS7 1700 aa33.98■■■■□ 3.03
CHPT1-210ENST00000552351 SBF1O95248 1867 aa33.98■■■■□ 3.03
CHPT1-210ENST00000552351 SNED1Q8TER0 1413 aa33.96■■■■□ 3.03
CHPT1-210ENST00000552351 RPS8P62241 208 aaKnown RBP33.96■■■■□ 3.03
CHPT1-210ENST00000552351 FOXO4P98177 505 aa33.96■■■■□ 3.03
CHPT1-210ENST00000552351 SP8Q8IXZ3 490 aa33.96■■■■□ 3.03
CHPT1-210ENST00000552351 CELF1Q92879 486 aaKnown RBP33.96■■■■□ 3.03
CHPT1-210ENST00000552351 NFKBIEO00221 500 aa33.95■■■■□ 3.03
CHPT1-210ENST00000552351 CDC5LQ99459 802 aaKnown RBP33.95■■■■□ 3.03
CHPT1-210ENST00000552351 TAOK3Q9H2K8 898 aa33.95■■■■□ 3.03
CHPT1-210ENST00000552351 GREM2Q9H772 168 aa33.94■■■■□ 3.02
CHPT1-210ENST00000552351 SEC31BQ9NQW1 1179 aa33.94■■■■□ 3.02
CHPT1-210ENST00000552351 HDAC5Q9UQL6 1122 aa33.94■■■■□ 3.02
CHPT1-210ENST00000552351 CCDC85AQ96PX6 553 aaPredicted RBP33.94■■■■□ 3.02
CHPT1-210ENST00000552351 MS4A1P11836 297 aa33.93■■■■□ 3.02
CHPT1-210ENST00000552351 FTSJ3Q8IY81 847 aaKnown RBP33.93■■■■□ 3.02
CHPT1-210ENST00000552351 CLUAP1Q96AJ1 413 aa33.93■■■■□ 3.02
CHPT1-210ENST00000552351 DZIP1LQ8IYY4 767 aaKnown RBP33.92■■■■□ 3.02
CHPT1-210ENST00000552351 SUCLG2Q96I99 432 aa33.92■■■■□ 3.02
CHPT1-210ENST00000552351 LMNB1P20700 586 aa33.91■■■■□ 3.02
CHPT1-210ENST00000552351 OLFM4Q6UX06 510 aa33.91■■■■□ 3.02
CHPT1-210ENST00000552351 ANKRD18AQ8IVF6 992 aa33.91■■■■□ 3.02
CHPT1-210ENST00000552351 KAZALD1Q96I82 304 aa33.91■■■■□ 3.02
CHPT1-210ENST00000552351 PSMD1Q99460 953 aa33.91■■■■□ 3.02
CHPT1-210ENST00000552351 COL4A1P02462 1669 aa33.91■■■■□ 3.02
CHPT1-210ENST00000552351 CCDC88AQ3V6T2 1871 aa33.91■■■■□ 3.02
CHPT1-210ENST00000552351 FKBP4Q02790 459 aaKnown RBP eCLIP33.9■■■■□ 3.02
CHPT1-210ENST00000552351 FAM161AQ3B820 660 aa33.9■■■■□ 3.02
CHPT1-210ENST00000552351 UBTFL1P0CB47 393 aaPredicted RBP33.89■■■■□ 3.02
CHPT1-210ENST00000552351 ITGA6P23229 1130 aa33.89■■■■□ 3.02
CHPT1-210ENST00000552351 RASSF7Q02833 373 aa33.89■■■■□ 3.02
CHPT1-210ENST00000552351 RABL6Q3YEC7 729 aaPredicted RBP33.89■■■■□ 3.02
CHPT1-210ENST00000552351 EPHA10Q5JZY3 1008 aa33.89■■■■□ 3.02
CHPT1-210ENST00000552351 LMBR1LQ6UX01 489 aa33.89■■■■□ 3.02
CHPT1-210ENST00000552351 TNNQ9UQP3 1299 aa33.89■■■■□ 3.02
CHPT1-210ENST00000552351 DICER1Q9UPY3 1922 aaKnown RBP33.88■■■■□ 3.01
CHPT1-210ENST00000552351 GNAI3P08754 354 aa33.88■■■■□ 3.01
CHPT1-210ENST00000552351 IFIT5Q13325 482 aaKnown RBP33.88■■■■□ 3.01
CHPT1-210ENST00000552351 ANKRD18BA2A2Z9 1011 aa33.87■■■■□ 3.01
CHPT1-210ENST00000552351 TMEM57Q8N5G2 664 aa33.87■■■■□ 3.01
CHPT1-210ENST00000552351 BICC1Q9H694 974 aaKnown RBP33.87■■■■□ 3.01
CHPT1-210ENST00000552351 GOLGA6L2Q8N9W4 650 aaPredicted RBP33.86■■■■□ 3.01
CHPT1-210ENST00000552351 C9orf131Q5VYM1 1079 aa33.85■■■■□ 3.01
CHPT1-210ENST00000552351 BSDC1Q9NW68 430 aaPredicted RBP33.85■■■■□ 3.01
CHPT1-210ENST00000552351 CHMP3Q9Y3E7 222 aa33.85■■■■□ 3.01
CHPT1-210ENST00000552351 SPEF2Q9C093 1822 aa33.85■■■■□ 3.01
CHPT1-210ENST00000552351 ZC3H4Q9UPT8 1303 aaKnown RBP33.85■■■■□ 3.01
CHPT1-210ENST00000552351 YY1P25490 414 aa33.84■■■■□ 3.01
CHPT1-210ENST00000552351 IGHMBP2P38935 993 aaKnown RBP33.84■■■■□ 3.01
CHPT1-210ENST00000552351 CCDC57Q2TAC2 916 aa33.84■■■■□ 3.01
CHPT1-210ENST00000552351 MEIS3Q99687 375 aa33.84■■■■□ 3.01
CHPT1-210ENST00000552351 MPNDQ8N594 471 aa33.84■■■■□ 3.01
CHPT1-210ENST00000552351 RTFDC1Q9BY42 306 aaPredicted RBP33.84■■■■□ 3.01
CHPT1-210ENST00000552351 RNF181Q9P0P0 153 aa33.84■■■■□ 3.01
CHPT1-210ENST00000552351 LTBP1Q14766 1721 aa33.83■■■■□ 3.01
CHPT1-210ENST00000552351 DPP8Q6V1X1 898 aaPredicted RBP33.83■■■■□ 3.01
CHPT1-210ENST00000552351 ANKRD44Q8N8A2 993 aa33.83■■■■□ 3.01
CHPT1-210ENST00000552351 SUPT20HQ8NEM7 779 aa33.83■■■■□ 3.01
CHPT1-210ENST00000552351 PRELPP51888 382 aa33.82■■■■□ 3
CHPT1-210ENST00000552351 VPS33BQ9H267 617 aa33.82■■■■□ 3
CHPT1-210ENST00000552351 RLBP1P12271 317 aa33.81■■■■□ 3
CHPT1-210ENST00000552351 MPHOSPH8Q99549 860 aa33.81■■■■□ 3
CHPT1-210ENST00000552351 TIAM2Q8IVF5 1701 aa33.8■■■■□ 3
CHPT1-210ENST00000552351 SLC51AQ86UW1 340 aa33.8■■■■□ 3
CHPT1-210ENST00000552351 PODXL2Q9NZ53 605 aa33.8■■■■□ 3
CHPT1-210ENST00000552351 NSFL1CQ9UNZ2 370 aaKnown RBP33.79■■■■□ 3
CHPT1-210ENST00000552351 DUOX1Q9NRD9 1551 aa33.79■■■■□ 3
CHPT1-210ENST00000552351 ITPRIPQ8IWB1 547 aa33.79■■■■□ 3
CHPT1-210ENST00000552351 IARSP41252 1262 aaKnown RBP33.78■■■■□ 3
CHPT1-210ENST00000552351 ZNF277Q9NRM2 450 aaPredicted RBP33.78■■■■□ 3
CHPT1-210ENST00000552351 LRRFIP2Q9Y608 721 aaKnown RBP33.78■■■■□ 3
CHPT1-210ENST00000552351 PDE3AQ14432 1141 aa33.77■■■■□ 3
CHPT1-210ENST00000552351 TAF7LQ5H9L4 462 aa33.76■■■■□ 3
Retrieved 100 of 20,778 RNA–protein pairs in 50 ms