RNA–Protein interactions for RNA: ENST00000552188.1

CCDC65-204, Transcript of coiled-coil domain containing 65, humanhuman

TSL 3

Gene CCDC65, Length 582 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC65-204ENST00000552188 TSR2Q969E8 191 aaKnown RBP7.59□□□□□ -1.19
CCDC65-204ENST00000552188 CNKSR1Q969H4 720 aa7.59□□□□□ -1.19
CCDC65-204ENST00000552188 MASTLQ96GX5 879 aa7.59□□□□□ -1.19
CCDC65-204ENST00000552188 OCEL1Q9H607 264 aa7.59□□□□□ -1.19
CCDC65-204ENST00000552188 METRNQ9UJH8 293 aa7.59□□□□□ -1.19
CCDC65-204ENST00000552188 SLX4Q8IY92 1834 aa7.59□□□□□ -1.19
CCDC65-204ENST00000552188 DICER1Q9UPY3 1922 aaKnown RBP7.58□□□□□ -1.2
CCDC65-204ENST00000552188 CCER2I3L3R5 266 aa7.58□□□□□ -1.2
CCDC65-204ENST00000552188 ALDH1B1P30837 517 aa7.58□□□□□ -1.2
CCDC65-204ENST00000552188 PDIA6Q15084 440 aa7.58□□□□□ -1.2
CCDC65-204ENST00000552188 NUTM1Q86Y26 1132 aa7.58□□□□□ -1.2
CCDC65-204ENST00000552188 PDCD7Q8N8D1 485 aaKnown RBP7.58□□□□□ -1.2
CCDC65-204ENST00000552188 C8orf58Q8NAV2 365 aa7.58□□□□□ -1.2
CCDC65-204ENST00000552188 PLBD2Q8NHP8 589 aa7.58□□□□□ -1.2
CCDC65-204ENST00000552188 RPGRQ92834 1020 aaKnown RBP7.58□□□□□ -1.2
CCDC65-204ENST00000552188 UTP14AQ9BVJ6 771 aaKnown RBP7.58□□□□□ -1.2
CCDC65-204ENST00000552188 TMX4Q9H1E5 349 aaPredicted RBP7.58□□□□□ -1.2
CCDC65-204ENST00000552188 MYH16Q9H6N6 1097 aa7.58□□□□□ -1.2
CCDC65-204ENST00000552188 TRMT112Q9UI30 125 aaKnown RBP7.58□□□□□ -1.2
CCDC65-204ENST00000552188 GTF3C3Q9Y5Q9 886 aa7.58□□□□□ -1.2
CCDC65-204ENST00000552188 ATP10DQ9P241 1426 aa7.58□□□□□ -1.2
CCDC65-204ENST00000552188 FER1L6Q2WGJ9 1857 aa7.58□□□□□ -1.2
CCDC65-204ENST00000552188 C21orf2O43822 256 aa7.57□□□□□ -1.2
CCDC65-204ENST00000552188 C7P10643 843 aa7.57□□□□□ -1.2
CCDC65-204ENST00000552188 NPR1P16066 1061 aa7.57□□□□□ -1.2
CCDC65-204ENST00000552188 TCIRG1Q13488 830 aa7.57□□□□□ -1.2
CCDC65-204ENST00000552188 ERFEQ4G0M1 354 aa7.57□□□□□ -1.2
CCDC65-204ENST00000552188 SOGA3Q5TF21 947 aa7.57□□□□□ -1.2
CCDC65-204ENST00000552188 SUSD4Q5VX71 490 aa7.57□□□□□ -1.2
CCDC65-204ENST00000552188 STYK1Q6J9G0 422 aa7.57□□□□□ -1.2
CCDC65-204ENST00000552188 ZNF34Q8IZ26 560 aa7.57□□□□□ -1.2
CCDC65-204ENST00000552188 ZNF784Q8NCA9 323 aaPredicted RBP7.57□□□□□ -1.2
CCDC65-204ENST00000552188 ZNF526Q8TF50 670 aaPredicted RBP7.57□□□□□ -1.2
CCDC65-204ENST00000552188 NLRP3Q96P20 1036 aa7.57□□□□□ -1.2
CCDC65-204ENST00000552188 TIAM2Q8IVF5 1701 aa7.57□□□□□ -1.2
CCDC65-204ENST00000552188 TNRC6CQ9HCJ0 1690 aaKnown RBP7.57□□□□□ -1.2
CCDC65-204ENST00000552188 MYH3P11055 1940 aa7.56□□□□□ -1.2
CCDC65-204ENST00000552188 POTEFA5A3E0 1075 aa7.56□□□□□ -1.2
CCDC65-204ENST00000552188 TCERG1O14776 1098 aaKnown RBP7.56□□□□□ -1.2
CCDC65-204ENST00000552188 SRGNP10124 158 aa7.56□□□□□ -1.2
CCDC65-204ENST00000552188 EXOSC9Q06265 439 aaKnown RBP7.56□□□□□ -1.2
CCDC65-204ENST00000552188 NEXNQ0ZGT2 675 aa7.56□□□□□ -1.2
CCDC65-204ENST00000552188 RBM17Q96I25 401 aaKnown RBP7.56□□□□□ -1.2
CCDC65-204ENST00000552188 PHAXQ9H814 394 aaKnown RBP7.56□□□□□ -1.2
CCDC65-204ENST00000552188 GPBP1L1Q9HC44 474 aaPredicted RBP7.56□□□□□ -1.2
CCDC65-204ENST00000552188 RNF181Q9P0P0 153 aa7.56□□□□□ -1.2
CCDC65-204ENST00000552188 IBTKQ9P2D0 1353 aaPredicted RBP7.56□□□□□ -1.2
CCDC65-204ENST00000552188 TAF1P21675 1872 aa7.55□□□□□ -1.2
CCDC65-204ENST00000552188 DDX60Q8IY21 1712 aaKnown RBP7.55□□□□□ -1.2
CCDC65-204ENST00000552188 RNF123Q5XPI4 1314 aa7.55□□□□□ -1.2
CCDC65-204ENST00000552188 UBN2Q6ZU65 1347 aa7.55□□□□□ -1.2
CCDC65-204ENST00000552188 FANCIQ9NVI1 1328 aa7.55□□□□□ -1.2
CCDC65-204ENST00000552188 ATP5J2-PTCD1G3V325 749 aa7.55□□□□□ -1.2
CCDC65-204ENST00000552188 NTSR2O95665 410 aa7.55□□□□□ -1.2
CCDC65-204ENST00000552188 HSP90B1P14625 803 aaKnown RBP7.55□□□□□ -1.2
CCDC65-204ENST00000552188 C9orf131Q5VYM1 1079 aa7.55□□□□□ -1.2
CCDC65-204ENST00000552188 PRPF40BQ6NWY9 871 aaKnown RBP7.55□□□□□ -1.2
CCDC65-204ENST00000552188 LRP10Q7Z4F1 713 aa7.55□□□□□ -1.2
CCDC65-204ENST00000552188 NLRP10Q86W26 655 aa7.55□□□□□ -1.2
CCDC65-204ENST00000552188 TSPYL6Q8N831 410 aa7.55□□□□□ -1.2
CCDC65-204ENST00000552188 ZNF428Q96B54 188 aa7.55□□□□□ -1.2
CCDC65-204ENST00000552188 MYD88Q99836 296 aa7.55□□□□□ -1.2
CCDC65-204ENST00000552188 SH3TC1Q8TE82 1336 aa7.54□□□□□ -1.2
CCDC65-204ENST00000552188 LMNB1P20700 586 aa7.54□□□□□ -1.2
CCDC65-204ENST00000552188 RASSF7Q02833 373 aa7.54□□□□□ -1.2
CCDC65-204ENST00000552188 CCDC93Q567U6 631 aa7.54□□□□□ -1.2
CCDC65-204ENST00000552188 RTL5Q5HYW3 569 aaPredicted RBP7.54□□□□□ -1.2
CCDC65-204ENST00000552188 DDX46Q7L014 1031 aaKnown RBP7.54□□□□□ -1.2
CCDC65-204ENST00000552188 SPEF2Q9C093 1822 aa7.54□□□□□ -1.2
CCDC65-204ENST00000552188 KDM2BQ8NHM5 1336 aa7.53□□□□□ -1.2
CCDC65-204ENST00000552188 RIC1Q4ADV7 1423 aa7.53□□□□□ -1.2
CCDC65-204ENST00000552188 E9PSI1 815 aa7.53□□□□□ -1.2
CCDC65-204ENST00000552188 HCLS1P14317 486 aaPredicted RBP7.53□□□□□ -1.2
CCDC65-204ENST00000552188 FKBP5Q13451 457 aaPredicted RBP7.53□□□□□ -1.2
CCDC65-204ENST00000552188 KSR2Q6VAB6 950 aa7.53□□□□□ -1.2
CCDC65-204ENST00000552188 C16orf71Q8IYS4 520 aaPredicted RBP7.53□□□□□ -1.2
CCDC65-204ENST00000552188 RTKN2Q8IZC4 609 aa7.53□□□□□ -1.2
CCDC65-204ENST00000552188 FAM89AQ96GI7 184 aa7.53□□□□□ -1.2
CCDC65-204ENST00000552188 ISCA1Q9BUE6 129 aa7.53□□□□□ -1.2
CCDC65-204ENST00000552188 METTL22Q9BUU2 404 aaPredicted RBP7.53□□□□□ -1.2
CCDC65-204ENST00000552188 TAOK3Q9H2K8 898 aa7.53□□□□□ -1.2
CCDC65-204ENST00000552188 CWC25Q9NXE8 425 aaPredicted RBP7.53□□□□□ -1.2
CCDC65-204ENST00000552188 MAP3K2Q9Y2U5 619 aa7.53□□□□□ -1.2
CCDC65-204ENST00000552188 ABCC12Q96J65 1359 aa7.53□□□□□ -1.2
CCDC65-204ENST00000552188 KLRG2A4D1S0 409 aaPredicted RBP7.52□□□□□ -1.21
CCDC65-204ENST00000552188 PI4KAP2A4QPH2 592 aa7.52□□□□□ -1.21
CCDC65-204ENST00000552188 G3V3G9 751 aa7.52□□□□□ -1.21
CCDC65-204ENST00000552188 IRS4O14654 1257 aaPredicted RBP7.52□□□□□ -1.21
CCDC65-204ENST00000552188 PPEF1O14829 653 aaPredicted RBP7.52□□□□□ -1.21
CCDC65-204ENST00000552188 VAMP4O75379 141 aa7.52□□□□□ -1.21
CCDC65-204ENST00000552188 SLC10A5Q5PT55 438 aa7.52□□□□□ -1.21
CCDC65-204ENST00000552188 CC2D2BQ6DHV5 1058 aa7.52□□□□□ -1.21
CCDC65-204ENST00000552188 PI4KAP1Q8N8J0 262 aa7.52□□□□□ -1.21
CCDC65-204ENST00000552188 CCDC191Q8NCU4 936 aa7.52□□□□□ -1.21
CCDC65-204ENST00000552188 CRAMP1Q96RY5 1269 aa7.52□□□□□ -1.21
CCDC65-204ENST00000552188 NFKBIEO00221 500 aa7.51□□□□□ -1.21
CCDC65-204ENST00000552188 HOXA10P31260 410 aaPredicted RBP7.51□□□□□ -1.21
CCDC65-204ENST00000552188 FKBP4Q02790 459 aaKnown RBP eCLIP7.51□□□□□ -1.21
CCDC65-204ENST00000552188 FLIIQ13045 1269 aa7.51□□□□□ -1.21
CCDC65-204ENST00000552188 TRIM28Q13263 835 aaKnown RBP7.51□□□□□ -1.21
Retrieved 100 of 20,778 RNA–protein pairs in 9.6 ms