RNA–Protein interactions for RNA: ENST00000552085.1

SNRPF-204, Transcript of small nuclear ribonucleoprotein polypeptide F, humanhuman

TSL 3 BASIC

Gene SNRPF, Length 815 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRPF-204ENST00000552085 PRAMEF22A3QJZ6 481 aa16.88■□□□□ 0.29
SNRPF-204ENST00000552085 YDJCA8MPS7 323 aa16.88■□□□□ 0.29
SNRPF-204ENST00000552085 ZBTB12Q9Y330 459 aaPredicted RBP16.88■□□□□ 0.29
SNRPF-204ENST00000552085 DPP8Q6V1X1 898 aaPredicted RBP16.87■□□□□ 0.29
SNRPF-204ENST00000552085 SULF1Q8IWU6 871 aa16.87■□□□□ 0.29
SNRPF-204ENST00000552085 CDCA5Q96FF9 252 aa16.87■□□□□ 0.29
SNRPF-204ENST00000552085 SZT2Q5T011 3432 aa16.86■□□□□ 0.29
SNRPF-204ENST00000552085 NBPF26B4DH59 902 aa16.86■□□□□ 0.29
SNRPF-204ENST00000552085 EN2P19622 333 aaPredicted RBP16.86■□□□□ 0.29
SNRPF-204ENST00000552085 TM4SF4P48230 202 aa16.86■□□□□ 0.29
SNRPF-204ENST00000552085 NBPF10Q6P3W6 841 aaKnown RBP16.86■□□□□ 0.29
SNRPF-204ENST00000552085 OTUD5Q96G74 571 aa16.86■□□□□ 0.29
SNRPF-204ENST00000552085 BTBD11A6QL63 1104 aa16.85■□□□□ 0.29
SNRPF-204ENST00000552085 GNAT3A8MTJ3 354 aa16.85■□□□□ 0.29
SNRPF-204ENST00000552085 FKBP1BP68106 108 aa16.85■□□□□ 0.29
SNRPF-204ENST00000552085 RBM26Q5T8P6 1007 aaKnown RBP16.85■□□□□ 0.29
SNRPF-204ENST00000552085 IBTKQ9P2D0 1353 aaPredicted RBP16.85■□□□□ 0.29
SNRPF-204ENST00000552085 SNRPA1P09661 255 aaKnown RBP16.84■□□□□ 0.29
SNRPF-204ENST00000552085 MPNDQ8N594 471 aa16.84■□□□□ 0.29
SNRPF-204ENST00000552085 CFHR5Q9BXR6 569 aa16.84■□□□□ 0.29
SNRPF-204ENST00000552085 TRIM17Q9Y577 477 aa16.84■□□□□ 0.29
SNRPF-204ENST00000552085 H0YGN5 161 aa16.83■□□□□ 0.28
SNRPF-204ENST00000552085 PSMD14O00487 310 aa16.83■□□□□ 0.28
SNRPF-204ENST00000552085 MNX1P50219 401 aaPredicted RBP16.83■□□□□ 0.28
SNRPF-204ENST00000552085 LAMB2P55268 1798 aa16.83■□□□□ 0.28
SNRPF-204ENST00000552085 C3orf67Q6ZVT6 689 aa16.83■□□□□ 0.28
SNRPF-204ENST00000552085 POLR3GLQ9BT43 218 aa16.83■□□□□ 0.28
SNRPF-204ENST00000552085 GGA3Q9NZ52 723 aa16.83■□□□□ 0.28
SNRPF-204ENST00000552085 DDX60Q8IY21 1712 aaKnown RBP16.82■□□□□ 0.28
SNRPF-204ENST00000552085 CEMIPQ8WUJ3 1361 aa16.82■□□□□ 0.28
SNRPF-204ENST00000552085 KIF4BQ2VIQ3 1234 aa16.82■□□□□ 0.28
SNRPF-204ENST00000552085 SP8Q8IXZ3 490 aa16.82■□□□□ 0.28
SNRPF-204ENST00000552085 R3HDMLQ9H3Y0 253 aa16.82■□□□□ 0.28
SNRPF-204ENST00000552085 LAMB4A4D0S4 1761 aa16.82■□□□□ 0.28
SNRPF-204ENST00000552085 ANKRD36CQ5JPF3 1778 aa16.82■□□□□ 0.28
SNRPF-204ENST00000552085 ABCC4O15439 1325 aa16.81■□□□□ 0.28
SNRPF-204ENST00000552085 RPS12P25398 132 aaKnown RBP16.81■□□□□ 0.28
SNRPF-204ENST00000552085 SUSD4Q5VX71 490 aa16.81■□□□□ 0.28
SNRPF-204ENST00000552085 OTOP1Q7RTM1 612 aa16.81■□□□□ 0.28
SNRPF-204ENST00000552085 DUOX1Q9NRD9 1551 aa16.81■□□□□ 0.28
SNRPF-204ENST00000552085 CUL9Q8IWT3 2517 aa16.8■□□□□ 0.28
SNRPF-204ENST00000552085 UBN2Q6ZU65 1347 aa16.8■□□□□ 0.28
SNRPF-204ENST00000552085 ERVV-1B6SEH8 477 aa16.8■□□□□ 0.28
SNRPF-204ENST00000552085 CHRDL2Q6WN34 429 aa16.8■□□□□ 0.28
SNRPF-204ENST00000552085 GAS2L2Q8NHY3 880 aa16.8■□□□□ 0.28
SNRPF-204ENST00000552085 NLRP3Q96P20 1036 aa16.8■□□□□ 0.28
SNRPF-204ENST00000552085 PANK3Q9H999 370 aa16.8■□□□□ 0.28
SNRPF-204ENST00000552085 CEP290O15078 2479 aa16.79■□□□□ 0.28
SNRPF-204ENST00000552085 ASTN2O75129 1339 aaPredicted RBP16.79■□□□□ 0.28
SNRPF-204ENST00000552085 BBOX1O75936 387 aa16.79■□□□□ 0.28
SNRPF-204ENST00000552085 GPTP24298 496 aa16.79■□□□□ 0.28
SNRPF-204ENST00000552085 SREBF2Q12772 1141 aa16.79■□□□□ 0.28
SNRPF-204ENST00000552085 MOB2Q70IA6 237 aa16.79■□□□□ 0.28
SNRPF-204ENST00000552085 ARMC5Q96C12 935 aa16.79■□□□□ 0.28
SNRPF-204ENST00000552085 TAF1P21675 1872 aa16.79■□□□□ 0.28
SNRPF-204ENST00000552085 HTTP42858 3142 aa16.79■□□□□ 0.28
SNRPF-204ENST00000552085 UBE2Q2LH0YL09 131 aa16.78■□□□□ 0.28
SNRPF-204ENST00000552085 NTSR2O95665 410 aa16.78■□□□□ 0.28
SNRPF-204ENST00000552085 RBM27Q9P2N5 1060 aaKnown RBP16.78■□□□□ 0.28
SNRPF-204ENST00000552085 PTPN22Q9Y2R2 807 aa16.78■□□□□ 0.28
SNRPF-204ENST00000552085 MAP3K15Q6ZN16 1313 aa16.77■□□□□ 0.28
SNRPF-204ENST00000552085 PITPNM2Q9BZ72 1349 aa16.77■□□□□ 0.28
SNRPF-204ENST00000552085 LRRC37AA6NMS7 1700 aa16.77■□□□□ 0.28
SNRPF-204ENST00000552085 TMEM106CQ9BVX2 250 aa16.77■□□□□ 0.28
SNRPF-204ENST00000552085 MKRN3Q13064 507 aaKnown RBP16.76■□□□□ 0.27
SNRPF-204ENST00000552085 ANGEL2Q5VTE6 544 aaKnown RBP16.76■□□□□ 0.27
SNRPF-204ENST00000552085 NGEFQ8N5V2 710 aa16.76■□□□□ 0.27
SNRPF-204ENST00000552085 DBNDD1Q9H9R9 158 aa16.76■□□□□ 0.27
SNRPF-204ENST00000552085 KDM3BQ7LBC6 1761 aa16.75■□□□□ 0.27
SNRPF-204ENST00000552085 DIAPH1O60610 1272 aaKnown RBP16.75■□□□□ 0.27
SNRPF-204ENST00000552085 PPP1R42Q7Z4L9 355 aa16.75■□□□□ 0.27
SNRPF-204ENST00000552085 SCN9AQ15858 1988 aa16.75■□□□□ 0.27
SNRPF-204ENST00000552085 CENPFP49454 3210 aa16.74■□□□□ 0.27
SNRPF-204ENST00000552085 ALDH1A1P00352 501 aa16.74■□□□□ 0.27
SNRPF-204ENST00000552085 WASHC4Q2M389 1173 aa16.74■□□□□ 0.27
SNRPF-204ENST00000552085 SLC10A5Q5PT55 438 aa16.74■□□□□ 0.27
SNRPF-204ENST00000552085 KIF6Q6ZMV9 814 aa16.74■□□□□ 0.27
SNRPF-204ENST00000552085 ZNF34Q8IZ26 560 aa16.74■□□□□ 0.27
SNRPF-204ENST00000552085 RTL9Q8NET4 1388 aa16.74■□□□□ 0.27
SNRPF-204ENST00000552085 SCARF1Q14162 830 aa16.73■□□□□ 0.27
SNRPF-204ENST00000552085 KCNQ5Q9NR82 932 aa16.73■□□□□ 0.27
SNRPF-204ENST00000552085 BRCA2P51587 3418 aa16.73■□□□□ 0.27
SNRPF-204ENST00000552085 COL6A3P12111 3177 aa16.73■□□□□ 0.27
SNRPF-204ENST00000552085 ZNF609O15014 1411 aa16.72■□□□□ 0.27
SNRPF-204ENST00000552085 LAMB1P07942 1786 aa16.72■□□□□ 0.27
SNRPF-204ENST00000552085 TTLL7Q6ZT98 887 aa16.72■□□□□ 0.27
SNRPF-204ENST00000552085 ERO1AQ96HE7 468 aa16.72■□□□□ 0.27
SNRPF-204ENST00000552085 ZBTB3Q9H5J0 574 aa16.72■□□□□ 0.27
SNRPF-204ENST00000552085 RIMBP2O15034 1052 aa16.71■□□□□ 0.27
SNRPF-204ENST00000552085 ECE2O60344 883 aa16.71■□□□□ 0.27
SNRPF-204ENST00000552085 TTLL12Q14166 644 aaPredicted RBP16.71■□□□□ 0.27
SNRPF-204ENST00000552085 PSME4Q14997 1843 aa16.7■□□□□ 0.26
SNRPF-204ENST00000552085 TCIRG1Q13488 830 aa16.7■□□□□ 0.26
SNRPF-204ENST00000552085 GRAPQ13588 217 aa16.7■□□□□ 0.26
SNRPF-204ENST00000552085 PARP10Q53GL7 1025 aa16.7■□□□□ 0.26
SNRPF-204ENST00000552085 DDX46Q7L014 1031 aaKnown RBP16.7■□□□□ 0.26
SNRPF-204ENST00000552085 TMC4Q7Z404 712 aa16.7■□□□□ 0.26
SNRPF-204ENST00000552085 GRAPLQ8TC17 118 aaPredicted RBP16.7■□□□□ 0.26
SNRPF-204ENST00000552085 CD99L2Q8TCZ2 262 aa16.7■□□□□ 0.26
SNRPF-204ENST00000552085 ZNF333Q96JL9 665 aa16.7■□□□□ 0.26
Retrieved 100 of 20,778 RNA–protein pairs in 17.2 ms