RNA–Protein interactions for RNA: ENST00000551981.5

CHMP1A-210, Transcript of charged multivesicular body protein 1A, humanhuman

TSL 2

Gene CHMP1A, Length 689 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP1A-210ENST00000551981 CA12O43570 354 aa18.61■□□□□ 0.57
CHMP1A-210ENST00000551981 RIPK4P57078 832 aa18.61■□□□□ 0.57
CHMP1A-210ENST00000551981 LMOD3Q0VAK6 560 aa18.61■□□□□ 0.57
CHMP1A-210ENST00000551981 PROSER3Q2NL68 480 aa18.61■□□□□ 0.57
CHMP1A-210ENST00000551981 SAPCD2Q86UD0 394 aa18.61■□□□□ 0.57
CHMP1A-210ENST00000551981 NLRP10Q86W26 655 aa18.61■□□□□ 0.57
CHMP1A-210ENST00000551981 ZC3H15Q8WU90 426 aaKnown RBP18.61■□□□□ 0.57
CHMP1A-210ENST00000551981 SH3TC1Q8TE82 1336 aa18.6■□□□□ 0.57
CHMP1A-210ENST00000551981 ANXA1P04083 346 aa18.6■□□□□ 0.57
CHMP1A-210ENST00000551981 HCLS1P14317 486 aaPredicted RBP18.6■□□□□ 0.57
CHMP1A-210ENST00000551981 GRAPQ13588 217 aa18.6■□□□□ 0.57
CHMP1A-210ENST00000551981 TMC4Q7Z404 712 aa18.6■□□□□ 0.57
CHMP1A-210ENST00000551981 GRAPLQ8TC17 118 aaPredicted RBP18.6■□□□□ 0.57
CHMP1A-210ENST00000551981 HHIPL1Q96JK4 782 aa18.6■□□□□ 0.57
CHMP1A-210ENST00000551981 GLIS2Q9BZE0 524 aaPredicted RBP18.6■□□□□ 0.57
CHMP1A-210ENST00000551981 PGAP2Q9UHJ9 254 aa18.6■□□□□ 0.57
CHMP1A-210ENST00000551981 TRMT112Q9UI30 125 aaKnown RBP18.6■□□□□ 0.57
CHMP1A-210ENST00000551981 AOC2O75106 756 aa18.59■□□□□ 0.57
CHMP1A-210ENST00000551981 RAD17O75943 681 aa18.59■□□□□ 0.57
CHMP1A-210ENST00000551981 AIMP1Q12904 312 aaKnown RBP18.59■□□□□ 0.57
CHMP1A-210ENST00000551981 COPS6Q7L5N1 327 aa18.59■□□□□ 0.57
CHMP1A-210ENST00000551981 XAGE3Q8WTP9 111 aa18.59■□□□□ 0.57
CHMP1A-210ENST00000551981 CCDC85CA6NKD9 419 aa18.58■□□□□ 0.56
CHMP1A-210ENST00000551981 TCIRG1Q13488 830 aa18.58■□□□□ 0.56
CHMP1A-210ENST00000551981 CDC37L1Q7L3B6 337 aa18.58■□□□□ 0.56
CHMP1A-210ENST00000551981 ZNF408Q9H9D4 720 aa18.58■□□□□ 0.56
CHMP1A-210ENST00000551981 H7C1D1 291 aa18.57■□□□□ 0.56
CHMP1A-210ENST00000551981 BRPF1P55201 1214 aaPredicted RBP18.57■□□□□ 0.56
CHMP1A-210ENST00000551981 FAM161AQ3B820 660 aa18.57■□□□□ 0.56
CHMP1A-210ENST00000551981 NECTIN2Q92692 538 aa18.57■□□□□ 0.56
CHMP1A-210ENST00000551981 CNOT7Q9UIV1 285 aaKnown RBP18.57■□□□□ 0.56
CHMP1A-210ENST00000551981 TSKSQ9UJT2 592 aa18.57■□□□□ 0.56
CHMP1A-210ENST00000551981 LRRC37AA6NMS7 1700 aa18.57■□□□□ 0.56
CHMP1A-210ENST00000551981 TAF1P21675 1872 aa18.56■□□□□ 0.56
CHMP1A-210ENST00000551981 HIRAP54198 1017 aaPredicted RBP18.55■□□□□ 0.56
CHMP1A-210ENST00000551981 TRPM4Q8TD43 1214 aa18.55■□□□□ 0.56
CHMP1A-210ENST00000551981 DUOX1Q9NRD9 1551 aa18.55■□□□□ 0.56
CHMP1A-210ENST00000551981 TMPOP42166 694 aaKnown RBP18.54■□□□□ 0.56
CHMP1A-210ENST00000551981 MLLT1Q03111 559 aaPredicted RBP18.54■□□□□ 0.56
CHMP1A-210ENST00000551981 MICALL2Q8IY33 904 aa18.54■□□□□ 0.56
CHMP1A-210ENST00000551981 DDX60Q8IY21 1712 aaKnown RBP18.54■□□□□ 0.56
CHMP1A-210ENST00000551981 YDJCA8MPS7 323 aa18.53■□□□□ 0.56
CHMP1A-210ENST00000551981 NOGQ13253 232 aa18.53■□□□□ 0.56
CHMP1A-210ENST00000551981 WASHC4Q2M389 1173 aa18.53■□□□□ 0.56
CHMP1A-210ENST00000551981 DPF2Q92785 391 aa18.53■□□□□ 0.56
CHMP1A-210ENST00000551981 CASP8AP2Q9UKL3 1982 aa18.52■□□□□ 0.56
CHMP1A-210ENST00000551981 USP48Q86UV5 1035 aa18.52■□□□□ 0.56
CHMP1A-210ENST00000551981 RGS19P49795 217 aa18.51■□□□□ 0.55
CHMP1A-210ENST00000551981 HUNKP57058 714 aa18.51■□□□□ 0.55
CHMP1A-210ENST00000551981 RALBP1Q15311 655 aa18.51■□□□□ 0.55
CHMP1A-210ENST00000551981 PLBD2Q8NHP8 589 aa18.51■□□□□ 0.55
CHMP1A-210ENST00000551981 CHPF2Q9P2E5 772 aa18.51■□□□□ 0.55
CHMP1A-210ENST00000551981 NSFL1CQ9UNZ2 370 aaKnown RBP18.51■□□□□ 0.55
CHMP1A-210ENST00000551981 SHTN1A0MZ66 631 aa18.5■□□□□ 0.55
CHMP1A-210ENST00000551981 PSMD14O00487 310 aa18.5■□□□□ 0.55
CHMP1A-210ENST00000551981 CHL1O00533 1208 aa18.5■□□□□ 0.55
CHMP1A-210ENST00000551981 RPS12P25398 132 aaKnown RBP18.5■□□□□ 0.55
CHMP1A-210ENST00000551981 HDGFL1Q5TGJ6 251 aa18.5■□□□□ 0.55
CHMP1A-210ENST00000551981 CFAP44Q96MT7 982 aa18.5■□□□□ 0.55
CHMP1A-210ENST00000551981 EYA3Q99504 573 aa18.5■□□□□ 0.55
CHMP1A-210ENST00000551981 MCOLN1Q9GZU1 580 aa18.5■□□□□ 0.55
CHMP1A-210ENST00000551981 DBNDD1Q9H9R9 158 aa18.5■□□□□ 0.55
CHMP1A-210ENST00000551981 ZBTB12Q9Y330 459 aaPredicted RBP18.5■□□□□ 0.55
CHMP1A-210ENST00000551981 LAS1LQ9Y4W2 734 aaKnown RBP18.5■□□□□ 0.55
CHMP1A-210ENST00000551981 C6orf229H3BNL8 230 aa18.49■□□□□ 0.55
CHMP1A-210ENST00000551981 HOXB7P09629 217 aa18.49■□□□□ 0.55
CHMP1A-210ENST00000551981 SF3B3Q15393 1217 aaKnown RBP18.49■□□□□ 0.55
CHMP1A-210ENST00000551981 NEUROD2Q15784 382 aa18.49■□□□□ 0.55
CHMP1A-210ENST00000551981 ANKRD13DQ6ZTN6 518 aa18.49■□□□□ 0.55
CHMP1A-210ENST00000551981 SAMD7Q7Z3H4 446 aa18.49■□□□□ 0.55
CHMP1A-210ENST00000551981 KRT26Q7Z3Y9 468 aa18.49■□□□□ 0.55
CHMP1A-210ENST00000551981 FAM89AQ96GI7 184 aa18.49■□□□□ 0.55
CHMP1A-210ENST00000551981 RIMBP2O15034 1052 aa18.48■□□□□ 0.55
CHMP1A-210ENST00000551981 KRT24Q2M2I5 525 aa18.48■□□□□ 0.55
CHMP1A-210ENST00000551981 TBC1D10BQ4KMP7 808 aaPredicted RBP18.48■□□□□ 0.55
CHMP1A-210ENST00000551981 CELF1Q92879 486 aaKnown RBP18.48■□□□□ 0.55
CHMP1A-210ENST00000551981 ZNF428Q96B54 188 aa18.48■□□□□ 0.55
CHMP1A-210ENST00000551981 DCPSQ96C86 337 aaKnown RBP18.48■□□□□ 0.55
CHMP1A-210ENST00000551981 ISCA1Q9BUE6 129 aa18.48■□□□□ 0.55
CHMP1A-210ENST00000551981 DBF4Q9UBU7 674 aaPredicted RBP18.48■□□□□ 0.55
CHMP1A-210ENST00000551981 POLR2AP24928 1970 aaKnown RBP18.48■□□□□ 0.55
CHMP1A-210ENST00000551981 ECE2O60344 883 aa18.47■□□□□ 0.55
CHMP1A-210ENST00000551981 SLC34A2O95436 690 aa18.47■□□□□ 0.55
CHMP1A-210ENST00000551981 DGKZQ13574 1117 aa18.47■□□□□ 0.55
CHMP1A-210ENST00000551981 RGMBQ6NW40 437 aa18.47■□□□□ 0.55
CHMP1A-210ENST00000551981 C2orf69Q8N8R5 385 aa18.47■□□□□ 0.55
CHMP1A-210ENST00000551981 HYPKQ9NX55 129 aa18.47■□□□□ 0.55
CHMP1A-210ENST00000551981 ATP5J2-PTCD1G3V325 749 aa18.46■□□□□ 0.55
CHMP1A-210ENST00000551981 GPSM2P81274 684 aa18.46■□□□□ 0.55
CHMP1A-210ENST00000551981 CCDC146Q8IYE0 955 aa18.46■□□□□ 0.55
CHMP1A-210ENST00000551981 CCDC102AQ96A19 550 aa18.46■□□□□ 0.55
CHMP1A-210ENST00000551981 GBA2Q9HCG7 927 aaPredicted RBP18.46■□□□□ 0.55
CHMP1A-210ENST00000551981 POLLQ9UGP5 575 aa18.46■□□□□ 0.55
CHMP1A-210ENST00000551981 HSP90B1P14625 803 aaKnown RBP18.45■□□□□ 0.54
CHMP1A-210ENST00000551981 DOK7Q18PE1 504 aa18.45■□□□□ 0.54
CHMP1A-210ENST00000551981 RBM26Q5T8P6 1007 aaKnown RBP18.45■□□□□ 0.54
CHMP1A-210ENST00000551981 SAGE1Q9NXZ1 904 aa18.45■□□□□ 0.54
CHMP1A-210ENST00000551981 G3V3G9 751 aa18.44■□□□□ 0.54
CHMP1A-210ENST00000551981 IRS4O14654 1257 aaPredicted RBP18.44■□□□□ 0.54
CHMP1A-210ENST00000551981 RPS8P62241 208 aaKnown RBP18.44■□□□□ 0.54
Retrieved 100 of 20,778 RNA–protein pairs in 34.6 ms