RNA–Protein interactions for RNA: ENST00000551966.5

SMARCD1-212, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily d, member 1, humanhuman

TSL 5

Gene SMARCD1, Length 881 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCD1-212ENST00000551966 TSKSQ9UJT2 592 aa28.49■■■□□ 2.15
SMARCD1-212ENST00000551966 CELF2O95319 508 aaKnown RBP28.48■■■□□ 2.15
SMARCD1-212ENST00000551966 MAP2K2P36507 400 aa28.48■■■□□ 2.15
SMARCD1-212ENST00000551966 AIMP1Q12904 312 aaKnown RBP28.48■■■□□ 2.15
SMARCD1-212ENST00000551966 CIAPIN1Q6FI81 312 aa28.48■■■□□ 2.15
SMARCD1-212ENST00000551966 NECTIN2Q92692 538 aa28.48■■■□□ 2.15
SMARCD1-212ENST00000551966 RAD17O75943 681 aa28.47■■■□□ 2.15
SMARCD1-212ENST00000551966 XAGE3Q8WTP9 111 aa28.47■■■□□ 2.15
SMARCD1-212ENST00000551966 TCIRG1Q13488 830 aa28.46■■■□□ 2.15
SMARCD1-212ENST00000551966 BABAM1Q9NWV8 329 aa28.46■■■□□ 2.15
SMARCD1-212ENST00000551966 LAMB2P55268 1798 aa28.46■■■□□ 2.15
SMARCD1-212ENST00000551966 SHTN1A0MZ66 631 aa28.45■■■□□ 2.14
SMARCD1-212ENST00000551966 YDJCA8MPS7 323 aa28.45■■■□□ 2.14
SMARCD1-212ENST00000551966 GRAPQ13588 217 aa28.44■■■□□ 2.14
SMARCD1-212ENST00000551966 FAM161AQ3B820 660 aa28.44■■■□□ 2.14
SMARCD1-212ENST00000551966 HSP90AB3PQ58FF7 597 aa28.44■■■□□ 2.14
SMARCD1-212ENST00000551966 DDX46Q7L014 1031 aaKnown RBP28.44■■■□□ 2.14
SMARCD1-212ENST00000551966 GRAPLQ8TC17 118 aaPredicted RBP28.44■■■□□ 2.14
SMARCD1-212ENST00000551966 TRPM4Q8TD43 1214 aa28.44■■■□□ 2.14
SMARCD1-212ENST00000551966 BCL2L13Q9BXK5 485 aa28.44■■■□□ 2.14
SMARCD1-212ENST00000551966 TRMT112Q9UI30 125 aaKnown RBP28.44■■■□□ 2.14
SMARCD1-212ENST00000551966 ANKRD36CQ5JPF3 1778 aa28.43■■■□□ 2.14
SMARCD1-212ENST00000551966 TNIP1Q15025 636 aa28.43■■■□□ 2.14
SMARCD1-212ENST00000551966 ZC3H15Q8WU90 426 aaKnown RBP28.43■■■□□ 2.14
SMARCD1-212ENST00000551966 ZNF428Q96B54 188 aa28.43■■■□□ 2.14
SMARCD1-212ENST00000551966 CNOT7Q9UIV1 285 aaKnown RBP28.43■■■□□ 2.14
SMARCD1-212ENST00000551966 TMPOP42166 694 aaKnown RBP28.42■■■□□ 2.14
SMARCD1-212ENST00000551966 HHIPL1Q96JK4 782 aa28.42■■■□□ 2.14
SMARCD1-212ENST00000551966 TAF1P21675 1872 aa28.42■■■□□ 2.14
SMARCD1-212ENST00000551966 SH3TC1Q8TE82 1336 aa28.42■■■□□ 2.14
SMARCD1-212ENST00000551966 CDHR2Q9BYE9 1310 aa28.42■■■□□ 2.14
SMARCD1-212ENST00000551966 CCDC85CA6NKD9 419 aa28.41■■■□□ 2.14
SMARCD1-212ENST00000551966 KRT24Q2M2I5 525 aa28.41■■■□□ 2.14
SMARCD1-212ENST00000551966 DLK2Q6UY11 383 aa28.4■■■□□ 2.14
SMARCD1-212ENST00000551966 CDC37L1Q7L3B6 337 aa28.4■■■□□ 2.14
SMARCD1-212ENST00000551966 ZNF408Q9H9D4 720 aa28.4■■■□□ 2.14
SMARCD1-212ENST00000551966 ZBTB12Q9Y330 459 aaPredicted RBP28.39■■■□□ 2.14
SMARCD1-212ENST00000551966 DUOX1Q9NRD9 1551 aa28.38■■■□□ 2.13
SMARCD1-212ENST00000551966 RGS19P49795 217 aa28.38■■■□□ 2.13
SMARCD1-212ENST00000551966 USP48Q86UV5 1035 aa28.37■■■□□ 2.13
SMARCD1-212ENST00000551966 ZIC5Q96T25 663 aa28.37■■■□□ 2.13
SMARCD1-212ENST00000551966 CHL1O00533 1208 aa28.36■■■□□ 2.13
SMARCD1-212ENST00000551966 BRPF1P55201 1214 aaPredicted RBP28.36■■■□□ 2.13
SMARCD1-212ENST00000551966 MICALL2Q8IY33 904 aa28.36■■■□□ 2.13
SMARCD1-212ENST00000551966 H7C1D1 291 aa28.35■■■□□ 2.13
SMARCD1-212ENST00000551966 SAMD7Q7Z3H4 446 aa28.35■■■□□ 2.13
SMARCD1-212ENST00000551966 TMC4Q7Z404 712 aa28.35■■■□□ 2.13
SMARCD1-212ENST00000551966 CELF1Q92879 486 aaKnown RBP28.35■■■□□ 2.13
SMARCD1-212ENST00000551966 PSMD14O00487 310 aa28.34■■■□□ 2.13
SMARCD1-212ENST00000551966 CA12O43570 354 aa28.34■■■□□ 2.13
SMARCD1-212ENST00000551966 LMOD3Q0VAK6 560 aa28.34■■■□□ 2.13
SMARCD1-212ENST00000551966 WASHC4Q2M389 1173 aa28.34■■■□□ 2.13
SMARCD1-212ENST00000551966 DPF2Q92785 391 aa28.34■■■□□ 2.13
SMARCD1-212ENST00000551966 FAM89AQ96GI7 184 aa28.34■■■□□ 2.13
SMARCD1-212ENST00000551966 CHPF2Q9P2E5 772 aa28.34■■■□□ 2.13
SMARCD1-212ENST00000551966 SF3B3Q15393 1217 aaKnown RBP28.33■■■□□ 2.13
SMARCD1-212ENST00000551966 NEUROD2Q15784 382 aa28.33■■■□□ 2.13
SMARCD1-212ENST00000551966 ISCA1Q9BUE6 129 aa28.33■■■□□ 2.13
SMARCD1-212ENST00000551966 MCOLN1Q9GZU1 580 aa28.33■■■□□ 2.13
SMARCD1-212ENST00000551966 DBNDD1Q9H9R9 158 aa28.33■■■□□ 2.13
SMARCD1-212ENST00000551966 KCNQ5Q9NR82 932 aa28.33■■■□□ 2.13
SMARCD1-212ENST00000551966 NSFL1CQ9UNZ2 370 aaKnown RBP28.33■■■□□ 2.13
SMARCD1-212ENST00000551966 RIMBP2O15034 1052 aa28.32■■■□□ 2.12
SMARCD1-212ENST00000551966 EGFRP00533 1210 aa28.32■■■□□ 2.12
SMARCD1-212ENST00000551966 MLLT1Q03111 559 aaPredicted RBP28.32■■■□□ 2.12
SMARCD1-212ENST00000551966 PLBD2Q8NHP8 589 aa28.32■■■□□ 2.12
SMARCD1-212ENST00000551966 POLLQ9UGP5 575 aa28.32■■■□□ 2.12
SMARCD1-212ENST00000551966 ANKRD13DQ6ZTN6 518 aa28.31■■■□□ 2.12
SMARCD1-212ENST00000551966 TRIM35Q9UPQ4 493 aa28.31■■■□□ 2.12
SMARCD1-212ENST00000551966 COL4A1P02462 1669 aa28.31■■■□□ 2.12
SMARCD1-212ENST00000551966 LRRC37AA6NMS7 1700 aa28.31■■■□□ 2.12
SMARCD1-212ENST00000551966 CASP8AP2Q9UKL3 1982 aa28.31■■■□□ 2.12
SMARCD1-212ENST00000551966 DDX60Q8IY21 1712 aaKnown RBP28.3■■■□□ 2.12
SMARCD1-212ENST00000551966 ATP5J2-PTCD1G3V325 749 aa28.3■■■□□ 2.12
SMARCD1-212ENST00000551966 GPSM2P81274 684 aa28.3■■■□□ 2.12
SMARCD1-212ENST00000551966 CCDC146Q8IYE0 955 aa28.3■■■□□ 2.12
SMARCD1-212ENST00000551966 LAS1LQ9Y4W2 734 aaKnown RBP28.3■■■□□ 2.12
SMARCD1-212ENST00000551966 HUNKP57058 714 aa28.29■■■□□ 2.12
SMARCD1-212ENST00000551966 TBC1D10BQ4KMP7 808 aaPredicted RBP28.29■■■□□ 2.12
SMARCD1-212ENST00000551966 SLC34A2O95436 690 aa28.28■■■□□ 2.12
SMARCD1-212ENST00000551966 NOGQ13253 232 aa28.28■■■□□ 2.12
SMARCD1-212ENST00000551966 RALBP1Q15311 655 aa28.28■■■□□ 2.12
SMARCD1-212ENST00000551966 FAM155AB1AL88 458 aaPredicted RBP28.27■■■□□ 2.12
SMARCD1-212ENST00000551966 C6orf229H3BNL8 230 aa28.27■■■□□ 2.12
SMARCD1-212ENST00000551966 DOK7Q18PE1 504 aa28.27■■■□□ 2.12
SMARCD1-212ENST00000551966 RTL5Q5HYW3 569 aaPredicted RBP28.27■■■□□ 2.12
SMARCD1-212ENST00000551966 RBM26Q5T8P6 1007 aaKnown RBP28.27■■■□□ 2.12
SMARCD1-212ENST00000551966 HDGFL1Q5TGJ6 251 aa28.27■■■□□ 2.12
SMARCD1-212ENST00000551966 RTL9Q8NET4 1388 aa28.26■■■□□ 2.12
SMARCD1-212ENST00000551966 KRT26Q7Z3Y9 468 aa28.26■■■□□ 2.11
SMARCD1-212ENST00000551966 POLR2AP24928 1970 aaKnown RBP28.25■■■□□ 2.11
SMARCD1-212ENST00000551966 ECE2O60344 883 aa28.25■■■□□ 2.11
SMARCD1-212ENST00000551966 DGKZQ13574 1117 aa28.25■■■□□ 2.11
SMARCD1-212ENST00000551966 DBF4Q9UBU7 674 aaPredicted RBP28.25■■■□□ 2.11
SMARCD1-212ENST00000551966 ADM5C9JUS6 153 aa28.24■■■□□ 2.11
SMARCD1-212ENST00000551966 RGMBQ6NW40 437 aa28.24■■■□□ 2.11
SMARCD1-212ENST00000551966 TBC1D16Q8TBP0 767 aa28.24■■■□□ 2.11
SMARCD1-212ENST00000551966 RPS12P25398 132 aaKnown RBP28.23■■■□□ 2.11
SMARCD1-212ENST00000551966 RPS8P62241 208 aaKnown RBP28.23■■■□□ 2.11
SMARCD1-212ENST00000551966 TRIM28Q13263 835 aaKnown RBP28.23■■■□□ 2.11
Retrieved 100 of 20,778 RNA–protein pairs in 13.6 ms