RNA–Protein interactions for RNA: ENST00000551787.5

BRF1-219, Transcript of BRF1, RNA polymerase III transcription initiation factor subunit, humanhuman

TSL 1 (best) BASIC

Gene BRF1, Length 824 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRF1-219ENST00000551787 DNAAF4Q8WXU2 420 aa21.36■■□□□ 1.01
BRF1-219ENST00000551787 DDNO94850 711 aaPredicted RBP21.35■■□□□ 1.01
BRF1-219ENST00000551787 C16orf71Q8IYS4 520 aaPredicted RBP21.35■■□□□ 1.01
BRF1-219ENST00000551787 SEC31BQ9NQW1 1179 aa21.35■■□□□ 1.01
BRF1-219ENST00000551787 SNED1Q8TER0 1413 aa21.35■■□□□ 1.01
BRF1-219ENST00000551787 TOMM70O94826 608 aa21.34■■□□□ 1.01
BRF1-219ENST00000551787 PDE8AO60658 829 aa21.33■■□□□ 1.01
BRF1-219ENST00000551787 HSP90B1P14625 803 aaKnown RBP21.33■■□□□ 1.01
BRF1-219ENST00000551787 VEGFAP15692 232 aaPredicted RBP21.33■■□□□ 1.01
BRF1-219ENST00000551787 GRIPAP1Q4V328 841 aa21.33■■□□□ 1.01
BRF1-219ENST00000551787 DPP8Q6V1X1 898 aaPredicted RBP21.33■■□□□ 1.01
BRF1-219ENST00000551787 UBE3BQ7Z3V4 1068 aa21.33■■□□□ 1.01
BRF1-219ENST00000551787 MPNDQ8N594 471 aa21.33■■□□□ 1.01
BRF1-219ENST00000551787 LAMB2P55268 1798 aa21.33■■□□□ 1
BRF1-219ENST00000551787 ZNF541Q9H0D2 1346 aa21.32■■□□□ 1
BRF1-219ENST00000551787 POTECB2RU33 542 aa21.32■■□□□ 1
BRF1-219ENST00000551787 GCKRQ14397 625 aa21.32■■□□□ 1
BRF1-219ENST00000551787 LARGE2Q8N3Y3 721 aa21.32■■□□□ 1
BRF1-219ENST00000551787 JDP2Q8WYK2 163 aa21.32■■□□□ 1
BRF1-219ENST00000551787 TAF1P21675 1872 aa21.32■■□□□ 1
BRF1-219ENST00000551787 DDX60Q8IY21 1712 aaKnown RBP21.32■■□□□ 1
BRF1-219ENST00000551787 RPS8P62241 208 aaKnown RBP21.31■■□□□ 1
BRF1-219ENST00000551787 CCDC152Q4G0S7 254 aa21.31■■□□□ 1
BRF1-219ENST00000551787 TIAM2Q8IVF5 1701 aa21.3■■□□□ 1
BRF1-219ENST00000551787 H7C1W4 665 aa21.3■■□□□ 1
BRF1-219ENST00000551787 PPIP5K2O43314 1243 aa21.3■■□□□ 1
BRF1-219ENST00000551787 AOC3Q16853 763 aa21.3■■□□□ 1
BRF1-219ENST00000551787 LINS1Q8NG48 757 aa21.3■■□□□ 1
BRF1-219ENST00000551787 NSFL1CQ9UNZ2 370 aaKnown RBP21.3■■□□□ 1
BRF1-219ENST00000551787 CDHR2Q9BYE9 1310 aa21.29■■□□□ 1
BRF1-219ENST00000551787 FZD9O00144 591 aa21.29■■□□□ 1
BRF1-219ENST00000551787 SLC4A10Q6U841 1118 aa21.29■■□□□ 1
BRF1-219ENST00000551787 COL4A1P02462 1669 aa21.28■■□□□ 1
BRF1-219ENST00000551787 DICER1Q9UPY3 1922 aaKnown RBP21.28■■□□□ 1
BRF1-219ENST00000551787 CTSWP56202 376 aa21.28■■□□□ 1
BRF1-219ENST00000551787 BEND3Q5T5X7 828 aa21.28■■□□□ 1
BRF1-219ENST00000551787 TMC4Q7Z404 712 aa21.28■■□□□ 1
BRF1-219ENST00000551787 TRMT2AQ8IZ69 625 aaKnown RBP21.28■■□□□ 1
BRF1-219ENST00000551787 MRPL50Q8N5N7 158 aaKnown RBP21.28■■□□□ 1
BRF1-219ENST00000551787 TTLL11Q8NHH1 800 aa21.28■■□□□ 1
BRF1-219ENST00000551787 SSH1Q8WYL5 1049 aa21.28■■□□□ 1
BRF1-219ENST00000551787 BCL2L13Q9BXK5 485 aa21.28■■□□□ 1
BRF1-219ENST00000551787 RTFDC1Q9BY42 306 aaPredicted RBP21.28■■□□□ 1
BRF1-219ENST00000551787 COL4A5P29400 1685 aa21.28■■□□□ 1
BRF1-219ENST00000551787 GPSM2P81274 684 aa21.27■■□□□ 1
BRF1-219ENST00000551787 NIM1KQ8IY84 436 aa21.27■■□□□ 1
BRF1-219ENST00000551787 SUPT20HQ8NEM7 779 aa21.27■■□□□ 1
BRF1-219ENST00000551787 RBM46Q8TBY0 533 aaKnown RBP21.27■■□□□ 1
BRF1-219ENST00000551787 GREM2Q9H772 168 aa21.27■■□□□ 1
BRF1-219ENST00000551787 GJA3Q9Y6H8 435 aa21.27■■□□□ 1
BRF1-219ENST00000551787 CASP7P55210 303 aa21.26■□□□□ 0.99
BRF1-219ENST00000551787 EIF6P56537 245 aaKnown RBP21.26■□□□□ 0.99
BRF1-219ENST00000551787 CEP350Q5VT06 3117 aa21.26■□□□□ 0.99
BRF1-219ENST00000551787 C6orf229H3BNL8 230 aa21.25■□□□□ 0.99
BRF1-219ENST00000551787 RIMBP2O15034 1052 aa21.25■□□□□ 0.99
BRF1-219ENST00000551787 GPR101Q96P66 508 aaPredicted RBP21.25■□□□□ 0.99
BRF1-219ENST00000551787 POLLQ9UGP5 575 aa21.25■□□□□ 0.99
BRF1-219ENST00000551787 HSPA6P17066 643 aa21.24■□□□□ 0.99
BRF1-219ENST00000551787 ANKRD18AQ8IVF6 992 aa21.24■□□□□ 0.99
BRF1-219ENST00000551787 KIAA2012Q0VF49 1180 aa21.23■□□□□ 0.99
BRF1-219ENST00000551787 ANKIB1Q9P2G1 1089 aa21.23■□□□□ 0.99
BRF1-219ENST00000551787 POTEIP0CG38 1075 aa21.22■□□□□ 0.99
BRF1-219ENST00000551787 POTEJP0CG39 1038 aa21.22■□□□□ 0.99
BRF1-219ENST00000551787 GPC2Q8N158 579 aa21.22■□□□□ 0.99
BRF1-219ENST00000551787 L3MBTL3Q96JM7 780 aaPredicted RBP21.22■□□□□ 0.99
BRF1-219ENST00000551787 VPS33BQ9H267 617 aa21.22■□□□□ 0.99
BRF1-219ENST00000551787 ZNRF3Q9ULT6 936 aa21.22■□□□□ 0.99
BRF1-219ENST00000551787 CACNA1FO60840 1977 aa21.22■□□□□ 0.99
BRF1-219ENST00000551787 HNRNPUQ00839 825 aaKnown RBP eCLIP21.21■□□□□ 0.99
BRF1-219ENST00000551787 WASHC4Q2M389 1173 aa21.21■□□□□ 0.99
BRF1-219ENST00000551787 FAM161AQ3B820 660 aa21.21■□□□□ 0.99
BRF1-219ENST00000551787 SMC1BQ8NDV3 1235 aa21.21■□□□□ 0.99
BRF1-219ENST00000551787 TBC1D16Q8TBP0 767 aa21.21■□□□□ 0.99
BRF1-219ENST00000551787 CDC5LQ99459 802 aaKnown RBP21.21■□□□□ 0.99
BRF1-219ENST00000551787 PLA2G12BQ9BX93 195 aa21.21■□□□□ 0.99
BRF1-219ENST00000551787 SRCIN1Q9C0H9 1055 aa21.21■□□□□ 0.99
BRF1-219ENST00000551787 TAF1DQ9H5J8 278 aaPredicted RBP21.21■□□□□ 0.99
BRF1-219ENST00000551787 SMC4Q9NTJ3 1288 aa21.21■□□□□ 0.99
BRF1-219ENST00000551787 C9orf78Q9NZ63 289 aaPredicted RBP21.21■□□□□ 0.99
BRF1-219ENST00000551787 CXCL9Q07325 125 aa21.2■□□□□ 0.98
BRF1-219ENST00000551787 FSTL1Q12841 308 aa21.2■□□□□ 0.98
BRF1-219ENST00000551787 DOK7Q18PE1 504 aa21.2■□□□□ 0.98
BRF1-219ENST00000551787 HACL1Q9UJ83 578 aa21.2■□□□□ 0.98
BRF1-219ENST00000551787 WDR90Q96KV7 1748 aa21.2■□□□□ 0.98
BRF1-219ENST00000551787 IQCA1LA6NCM1 817 aa21.19■□□□□ 0.98
BRF1-219ENST00000551787 WTIPA6NIX2 430 aaPredicted RBP21.19■□□□□ 0.98
BRF1-219ENST00000551787 GRM8O00222 908 aa21.19■□□□□ 0.98
BRF1-219ENST00000551787 RAD17O75943 681 aa21.19■□□□□ 0.98
BRF1-219ENST00000551787 UFL1O94874 794 aa21.19■□□□□ 0.98
BRF1-219ENST00000551787 CSF1RP07333 972 aa21.19■□□□□ 0.98
BRF1-219ENST00000551787 FOXO4P98177 505 aa21.19■□□□□ 0.98
BRF1-219ENST00000551787 EAPPQ56P03 285 aaPredicted RBP21.19■□□□□ 0.98
BRF1-219ENST00000551787 EPHA10Q5JZY3 1008 aa21.19■□□□□ 0.98
BRF1-219ENST00000551787 DBNDD1Q9H9R9 158 aa21.19■□□□□ 0.98
BRF1-219ENST00000551787 CHMP3Q9Y3E7 222 aa21.19■□□□□ 0.98
BRF1-219ENST00000551787 YDJCA8MPS7 323 aa21.18■□□□□ 0.98
BRF1-219ENST00000551787 ALDH1L1O75891 902 aa21.18■□□□□ 0.98
BRF1-219ENST00000551787 ITGA6P23229 1130 aa21.18■□□□□ 0.98
BRF1-219ENST00000551787 EPHX2P34913 555 aa21.18■□□□□ 0.98
BRF1-219ENST00000551787 ALDH1L2Q3SY69 923 aa21.18■□□□□ 0.98
Retrieved 100 of 20,778 RNA–protein pairs in 54.3 ms