RNA–Protein interactions for RNA: ENST00000551752.5

RBFOX1-213, Transcript of RNA binding fox-1 homolog 1, humanhuman

TSL 1 (best)

Gene RBFOX1, Length 974 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RBFOX1-213ENST00000551752 GLI3P10071 1580 aa11.49□□□□□ -0.57
RBFOX1-213ENST00000551752 ESPNB1AK53 854 aa11.48□□□□□ -0.57
RBFOX1-213ENST00000551752 GIGYF1O75420 1035 aaPredicted RBP11.48□□□□□ -0.57
RBFOX1-213ENST00000551752 GCP02774 474 aa11.48□□□□□ -0.57
RBFOX1-213ENST00000551752 NRAPQ86VF7 1730 aa11.47□□□□□ -0.57
RBFOX1-213ENST00000551752 KIAA0232Q92628 1395 aa11.47□□□□□ -0.57
RBFOX1-213ENST00000551752 SPATA31A5Q5VU36 1347 aa11.47□□□□□ -0.57
RBFOX1-213ENST00000551752 SPATA31A7Q8IWB4 1347 aa11.47□□□□□ -0.57
RBFOX1-213ENST00000551752 RNF20Q5VTR2 975 aa11.47□□□□□ -0.57
RBFOX1-213ENST00000551752 KCNH5Q8NCM2 988 aa11.47□□□□□ -0.57
RBFOX1-213ENST00000551752 ATP13A2Q9NQ11 1180 aa11.47□□□□□ -0.57
RBFOX1-213ENST00000551752 PHRF1Q9P1Y6 1649 aaKnown RBP11.46□□□□□ -0.57
RBFOX1-213ENST00000551752 TTC21BQ7Z4L5 1316 aa11.46□□□□□ -0.57
RBFOX1-213ENST00000551752 TESK2Q96S53 571 aa11.46□□□□□ -0.57
RBFOX1-213ENST00000551752 THRAP3Q9Y2W1 955 aaKnown RBP11.46□□□□□ -0.57
RBFOX1-213ENST00000551752 SLIT3O75094 1523 aa11.45□□□□□ -0.58
RBFOX1-213ENST00000551752 AATKQ6ZMQ8 1374 aa11.45□□□□□ -0.58
RBFOX1-213ENST00000551752 USP31Q70CQ4 1352 aa11.45□□□□□ -0.58
RBFOX1-213ENST00000551752 C11orf95C9JLR9 678 aaPredicted RBP11.45□□□□□ -0.58
RBFOX1-213ENST00000551752 ERVH48-1M5A8F1 160 aa11.45□□□□□ -0.58
RBFOX1-213ENST00000551752 CLUAP1Q96AJ1 413 aa11.45□□□□□ -0.58
RBFOX1-213ENST00000551752 TERF2IPQ9NYB0 399 aa11.45□□□□□ -0.58
RBFOX1-213ENST00000551752 AKAP12Q02952 1782 aa11.45□□□□□ -0.58
RBFOX1-213ENST00000551752 SPATA31A1Q5TZJ5 1347 aa11.44□□□□□ -0.58
RBFOX1-213ENST00000551752 BMP1P13497 986 aa11.44□□□□□ -0.58
RBFOX1-213ENST00000551752 SEMA3FQ13275 785 aa11.44□□□□□ -0.58
RBFOX1-213ENST00000551752 CDCA8Q53HL2 280 aa11.44□□□□□ -0.58
RBFOX1-213ENST00000551752 CEP126Q9P2H0 1117 aa11.44□□□□□ -0.58
RBFOX1-213ENST00000551752 NRKQ7Z2Y5 1582 aa11.44□□□□□ -0.58
RBFOX1-213ENST00000551752 ABCC6O95255 1503 aa11.44□□□□□ -0.58
RBFOX1-213ENST00000551752 KTN1Q86UP2 1357 aaKnown RBP11.43□□□□□ -0.58
RBFOX1-213ENST00000551752 ST20-MTHFSA0A0A6YYL1 179 aa11.43□□□□□ -0.58
RBFOX1-213ENST00000551752 SOX11P35716 441 aa11.43□□□□□ -0.58
RBFOX1-213ENST00000551752 ZC3H6P61129 1189 aaKnown RBP11.43□□□□□ -0.58
RBFOX1-213ENST00000551752 ZNF787Q6DD87 383 aa11.43□□□□□ -0.58
RBFOX1-213ENST00000551752 KRT27Q7Z3Y8 459 aa11.43□□□□□ -0.58
RBFOX1-213ENST00000551752 HDGFL2Q7Z4V5 671 aaPredicted RBP11.43□□□□□ -0.58
RBFOX1-213ENST00000551752 TMPRSS4Q9NRS4 437 aa11.43□□□□□ -0.58
RBFOX1-213ENST00000551752 GTF3C3Q9Y5Q9 886 aa11.43□□□□□ -0.58
RBFOX1-213ENST00000551752 BLMP54132 1417 aaPredicted RBP11.43□□□□□ -0.58
RBFOX1-213ENST00000551752 USP54Q70EL1 1684 aa11.43□□□□□ -0.58
RBFOX1-213ENST00000551752 LMO7Q8WWI1 1683 aa11.43□□□□□ -0.58
RBFOX1-213ENST00000551752 SCARF1Q14162 830 aa11.42□□□□□ -0.58
RBFOX1-213ENST00000551752 ARHGEF25Q86VW2 580 aa11.42□□□□□ -0.58
RBFOX1-213ENST00000551752 GMPR2Q9P2T1 348 aaKnown RBP11.42□□□□□ -0.58
RBFOX1-213ENST00000551752 CCDC9Q9Y3X0 531 aaKnown RBP11.42□□□□□ -0.58
RBFOX1-213ENST00000551752 EDC4Q6P2E9 1401 aaKnown RBP11.42□□□□□ -0.58
RBFOX1-213ENST00000551752 MON2Q7Z3U7 1717 aa11.41□□□□□ -0.58
RBFOX1-213ENST00000551752 CAMTA1Q9Y6Y1 1673 aa11.41□□□□□ -0.58
RBFOX1-213ENST00000551752 CD163L1Q9NR16 1453 aa11.41□□□□□ -0.58
RBFOX1-213ENST00000551752 UPP2O95045 317 aa11.41□□□□□ -0.58
RBFOX1-213ENST00000551752 EVA1CP58658 441 aa11.41□□□□□ -0.58
RBFOX1-213ENST00000551752 TMF1P82094 1093 aa11.41□□□□□ -0.58
RBFOX1-213ENST00000551752 NUTM2GQ5VZR2 741 aa11.41□□□□□ -0.58
RBFOX1-213ENST00000551752 MRPL14Q6P1L8 145 aaKnown RBP11.41□□□□□ -0.58
RBFOX1-213ENST00000551752 TRIM46Q7Z4K8 759 aa11.41□□□□□ -0.58
RBFOX1-213ENST00000551752 ZNF784Q8NCA9 323 aaPredicted RBP11.41□□□□□ -0.58
RBFOX1-213ENST00000551752 SENP2Q9HC62 589 aa11.41□□□□□ -0.58
RBFOX1-213ENST00000551752 PIK3C2AO00443 1686 aa11.4□□□□□ -0.58
RBFOX1-213ENST00000551752 THSD7AQ9UPZ6 1657 aa11.4□□□□□ -0.58
RBFOX1-213ENST00000551752 SLFNL1Q499Z3 407 aa11.4□□□□□ -0.58
RBFOX1-213ENST00000551752 TCP11L2Q8N4U5 519 aa11.4□□□□□ -0.58
RBFOX1-213ENST00000551752 MEIOBQ8N635 442 aa11.4□□□□□ -0.58
RBFOX1-213ENST00000551752 CDCA7Q9BWT1 371 aaPredicted RBP11.4□□□□□ -0.58
RBFOX1-213ENST00000551752 BRWD3Q6RI45 1802 aa11.39□□□□□ -0.59
RBFOX1-213ENST00000551752 POTECB2RU33 542 aa11.39□□□□□ -0.59
RBFOX1-213ENST00000551752 CBLBQ13191 982 aa11.39□□□□□ -0.59
RBFOX1-213ENST00000551752 CHRNA2Q15822 529 aa11.39□□□□□ -0.59
RBFOX1-213ENST00000551752 SLC12A5Q9H2X9 1139 aa11.39□□□□□ -0.59
RBFOX1-213ENST00000551752 USP47Q96K76 1375 aa11.39□□□□□ -0.59
RBFOX1-213ENST00000551752 COL5A2P05997 1499 aaPredicted RBP11.38□□□□□ -0.59
RBFOX1-213ENST00000551752 CRB1P82279 1406 aa11.38□□□□□ -0.59
RBFOX1-213ENST00000551752 SF3B2Q13435 895 aaKnown RBP11.38□□□□□ -0.59
RBFOX1-213ENST00000551752 PURBQ96QR8 312 aaKnown RBP11.38□□□□□ -0.59
RBFOX1-213ENST00000551752 CYLDQ9NQC7 956 aa11.38□□□□□ -0.59
RBFOX1-213ENST00000551752 PCDHB11Q9Y5F2 797 aa11.38□□□□□ -0.59
RBFOX1-213ENST00000551752 COL18A1P39060 1754 aa11.38□□□□□ -0.59
RBFOX1-213ENST00000551752 WDR17Q8IZU2 1322 aa11.37□□□□□ -0.59
RBFOX1-213ENST00000551752 DISP2A7MBM2 1401 aa11.37□□□□□ -0.59
RBFOX1-213ENST00000551752 A6NJR5 290 aa11.37□□□□□ -0.59
RBFOX1-213ENST00000551752 C6orf118Q5T5N4 469 aa11.37□□□□□ -0.59
RBFOX1-213ENST00000551752 FAM196AQ6ZSG2 479 aa11.37□□□□□ -0.59
RBFOX1-213ENST00000551752 Q6ZVU0 165 aa11.37□□□□□ -0.59
RBFOX1-213ENST00000551752 LINC00528Q8N1L1 170 aa11.37□□□□□ -0.59
RBFOX1-213ENST00000551752 TMC1Q8TDI8 760 aa11.37□□□□□ -0.59
RBFOX1-213ENST00000551752 KIFC2Q96AC6 838 aa11.37□□□□□ -0.59
RBFOX1-213ENST00000551752 ZFP42Q96MM3 310 aa11.37□□□□□ -0.59
RBFOX1-213ENST00000551752 TSEN34Q9BSV6 310 aaKnown RBP11.37□□□□□ -0.59
RBFOX1-213ENST00000551752 ANKRD36BQ8N2N9 1353 aa11.37□□□□□ -0.59
RBFOX1-213ENST00000551752 NFAT5O94916 1531 aa11.36□□□□□ -0.59
RBFOX1-213ENST00000551752 EP400Q96L91 3159 aa11.36□□□□□ -0.59
RBFOX1-213ENST00000551752 BMP2P12643 396 aa11.36□□□□□ -0.59
RBFOX1-213ENST00000551752 LARP1Q6PKG0 1096 aaKnown RBP11.36□□□□□ -0.59
RBFOX1-213ENST00000551752 RNF135Q8IUD6 432 aa11.36□□□□□ -0.59
RBFOX1-213ENST00000551752 TRIM47Q96LD4 638 aa11.36□□□□□ -0.59
RBFOX1-213ENST00000551752 CARD10Q9BWT7 1032 aa11.36□□□□□ -0.59
RBFOX1-213ENST00000551752 STRN4Q9NRL3 753 aa11.36□□□□□ -0.59
RBFOX1-213ENST00000551752 A0A1W2PP64 1363 aa11.36□□□□□ -0.59
RBFOX1-213ENST00000551752 BCL9O00512 1426 aa11.35□□□□□ -0.59
RBFOX1-213ENST00000551752 POM121CA8CG34 1229 aa11.35□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 39.7 ms